RNA–Protein interactions for RNA: ENST00000334944.9

SF1-202, Transcript of splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene SF1, Length 3,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-202ENST00000334944 OR6C74A6NCV1 312 aa12.87□□□□□ -0.35
SF1-202ENST00000334944 ARRDC5A6NEK1 342 aa12.87□□□□□ -0.35
SF1-202ENST00000334944 F8W036 122 aa12.87□□□□□ -0.35
SF1-202ENST00000334944 DNASE2O00115 360 aaPredicted RBP12.87□□□□□ -0.35
SF1-202ENST00000334944 HLA-DQB1P01920 261 aa12.87□□□□□ -0.35
SF1-202ENST00000334944 HPXP02790 462 aa12.87□□□□□ -0.35
SF1-202ENST00000334944 CD3GP09693 182 aa12.87□□□□□ -0.35
SF1-202ENST00000334944 MAZP56270 477 aaKnown RBP12.87□□□□□ -0.35
SF1-202ENST00000334944 IDNKQ5T6J7 187 aa12.87□□□□□ -0.35
SF1-202ENST00000334944 ZNF425Q6IV72 752 aa12.87□□□□□ -0.35
SF1-202ENST00000334944 TMEM88Q6PEY1 159 aa12.87□□□□□ -0.35
SF1-202ENST00000334944 ZC3H14Q6PJT7 736 aaKnown RBP12.87□□□□□ -0.35
SF1-202ENST00000334944 ZNF687Q8N1G0 1237 aa12.87□□□□□ -0.35
SF1-202ENST00000334944 MFSD9Q8NBP5 474 aa12.87□□□□□ -0.35
SF1-202ENST00000334944 CLRN3Q8NCR9 226 aa12.87□□□□□ -0.35
SF1-202ENST00000334944 ADAMTS15Q8TE58 950 aa12.87□□□□□ -0.35
SF1-202ENST00000334944 ELMOD3Q96FG2 381 aa12.87□□□□□ -0.35
SF1-202ENST00000334944 BMFQ96LC9 184 aa12.87□□□□□ -0.35
SF1-202ENST00000334944 THAP7Q9BT49 309 aaPredicted RBP12.87□□□□□ -0.35
SF1-202ENST00000334944 COLEC10Q9Y6Z7 277 aa12.87□□□□□ -0.35
SF1-202ENST00000334944 GPR89AB7ZAQ6 455 aa12.87□□□□□ -0.35
SF1-202ENST00000334944 EMC8O43402 210 aa12.87□□□□□ -0.35
SF1-202ENST00000334944 MPZL2O60487 215 aa12.87□□□□□ -0.35
SF1-202ENST00000334944 CELA2BP08218 269 aaPredicted RBP12.87□□□□□ -0.35
SF1-202ENST00000334944 GKN3PP0CG01 181 aa12.87□□□□□ -0.35
SF1-202ENST00000334944 GPR89BP0CG08 455 aa12.87□□□□□ -0.35
SF1-202ENST00000334944 GNSP15586 552 aa12.87□□□□□ -0.35
SF1-202ENST00000334944 CAPZA2P47755 286 aa12.87□□□□□ -0.35
SF1-202ENST00000334944 ATP12AP54707 1039 aa12.87□□□□□ -0.35
SF1-202ENST00000334944 COX10Q12887 443 aa12.87□□□□□ -0.35
SF1-202ENST00000334944 RUNX2Q13950 521 aa12.87□□□□□ -0.35
SF1-202ENST00000334944 RRM2BQ7LG56 351 aa12.87□□□□□ -0.35
SF1-202ENST00000334944 BBS10Q8TAM1 723 aa12.87□□□□□ -0.35
SF1-202ENST00000334944 TMEM255BQ8WV15 326 aa12.87□□□□□ -0.35
SF1-202ENST00000334944 PRRC1Q96M27 445 aa12.87□□□□□ -0.35
SF1-202ENST00000334944 RAB11FIP5Q9BXF6 653 aa12.87□□□□□ -0.35
SF1-202ENST00000334944 TINAGL1Q9GZM7 467 aaPredicted RBP12.87□□□□□ -0.35
SF1-202ENST00000334944 SLC6A15Q9H2J7 730 aa12.87□□□□□ -0.35
SF1-202ENST00000334944 LYARQ9NX58 379 aaKnown RBP12.87□□□□□ -0.35
SF1-202ENST00000334944 MRPL15Q9P015 296 aaKnown RBP12.87□□□□□ -0.35
SF1-202ENST00000334944 CLCA2Q9UQC9 943 aa12.87□□□□□ -0.35
SF1-202ENST00000334944 LRRC72A6NJI9 287 aa12.86□□□□□ -0.35
SF1-202ENST00000334944 ATG12O94817 140 aa12.86□□□□□ -0.35
SF1-202ENST00000334944 SLC2A10O95528 541 aa12.86□□□□□ -0.35
SF1-202ENST00000334944 CTSBP07858 339 aa12.86□□□□□ -0.35
SF1-202ENST00000334944 HK1P19367 917 aa12.86□□□□□ -0.35
SF1-202ENST00000334944 MAOBP27338 520 aa12.86□□□□□ -0.35
SF1-202ENST00000334944 CTHP32929 405 aa12.86□□□□□ -0.35
SF1-202ENST00000334944 BTCP35070 178 aa12.86□□□□□ -0.35
SF1-202ENST00000334944 AHRP35869 848 aa12.86□□□□□ -0.35
SF1-202ENST00000334944 RGS8P57771 180 aaPredicted RBP12.86□□□□□ -0.35
SF1-202ENST00000334944 SNRPGP62308 76 aaKnown RBP12.86□□□□□ -0.35
SF1-202ENST00000334944 TRA2BP62995 288 aaKnown RBP12.86□□□□□ -0.35
SF1-202ENST00000334944 ERVK-25P63136 954 aa12.86□□□□□ -0.35
SF1-202ENST00000334944 MLLT11Q13015 90 aaPredicted RBP12.86□□□□□ -0.35
SF1-202ENST00000334944 GPR18Q14330 331 aa12.86□□□□□ -0.35
SF1-202ENST00000334944 MLC1Q15049 377 aa12.86□□□□□ -0.35
SF1-202ENST00000334944 ASPGQ86U10 573 aa12.86□□□□□ -0.35
SF1-202ENST00000334944 LHFPL3Q86UP9 236 aa12.86□□□□□ -0.35
SF1-202ENST00000334944 MARCH9Q86YJ5 346 aa12.86□□□□□ -0.35
SF1-202ENST00000334944 OR52I1Q8NGK6 324 aa12.86□□□□□ -0.35
SF1-202ENST00000334944 ZFPM2Q8WW38 1151 aa12.86□□□□□ -0.35
SF1-202ENST00000334944 AP3S1Q92572 193 aa12.86□□□□□ -0.35
SF1-202ENST00000334944 MRGPRX1Q96LB2 322 aa12.86□□□□□ -0.35
SF1-202ENST00000334944 ZNF582Q96NG8 517 aaPredicted RBP12.86□□□□□ -0.35
SF1-202ENST00000334944 PITHD1Q9GZP4 211 aaPredicted RBP12.86□□□□□ -0.35
SF1-202ENST00000334944 CFAP54Q96N23 3096 aa12.86□□□□□ -0.35
SF1-202ENST00000334944 TICRRQ7Z2Z1 1910 aa12.86□□□□□ -0.35
SF1-202ENST00000334944 TRBV23-1A0A0A0MS06 115 aa12.86□□□□□ -0.35
SF1-202ENST00000334944 PRR19A6NJB7 356 aa12.86□□□□□ -0.35
SF1-202ENST00000334944 FAM183AA6NL82 134 aa12.86□□□□□ -0.35
SF1-202ENST00000334944 HCRTR1O43613 425 aa12.86□□□□□ -0.35
SF1-202ENST00000334944 NMBP08949 121 aa12.86□□□□□ -0.35
SF1-202ENST00000334944 PRG2P13727 222 aa12.86□□□□□ -0.35
SF1-202ENST00000334944 STXBP1P61764 594 aaKnown RBP12.86□□□□□ -0.35
SF1-202ENST00000334944 DEFB110Q30KQ9 67 aa12.86□□□□□ -0.35
SF1-202ENST00000334944 LYPD4Q6UWN0 246 aa12.86□□□□□ -0.35
SF1-202ENST00000334944 TMEM92Q6UXU6 159 aa12.86□□□□□ -0.35
SF1-202ENST00000334944 C3P1Q6ZMU1 363 aa12.86□□□□□ -0.35
SF1-202ENST00000334944 NRMQ8IXM6 262 aa12.86□□□□□ -0.35
SF1-202ENST00000334944 PM20D2Q8IYS1 436 aa12.86□□□□□ -0.35
SF1-202ENST00000334944 OR56A1Q8NGH5 318 aa12.86□□□□□ -0.35
SF1-202ENST00000334944 TMEM163Q8TC26 289 aa12.86□□□□□ -0.35
SF1-202ENST00000334944 C2CD4CQ8TF44 421 aa12.86□□□□□ -0.35
SF1-202ENST00000334944 HMGB4Q8WW32 186 aa12.86□□□□□ -0.35
SF1-202ENST00000334944 KIAA1143Q96AT1 154 aaPredicted RBP12.86□□□□□ -0.35
SF1-202ENST00000334944 ELSPBP1Q96BH3 223 aa12.86□□□□□ -0.35
SF1-202ENST00000334944 SCMH1Q96GD3 660 aa12.86□□□□□ -0.35
SF1-202ENST00000334944 FLVCR2Q9UPI3 526 aa12.86□□□□□ -0.35
SF1-202ENST00000334944 RPL36Q9Y3U8 105 aaKnown RBP12.86□□□□□ -0.35
SF1-202ENST00000334944 LALBAP00709 142 aa12.85□□□□□ -0.35
SF1-202ENST00000334944 THY1P04216 161 aa12.85□□□□□ -0.35
SF1-202ENST00000334944 ZP1P60852 638 aa12.85□□□□□ -0.35
SF1-202ENST00000334944 ENTPD8Q5MY95 495 aa12.85□□□□□ -0.35
SF1-202ENST00000334944 NRROSQ86YC3 692 aa12.85□□□□□ -0.35
SF1-202ENST00000334944 GPR135Q8IZ08 494 aa12.85□□□□□ -0.35
SF1-202ENST00000334944 TMEM52Q8NDY8 209 aa12.85□□□□□ -0.35
SF1-202ENST00000334944 BBS1Q8NFJ9 593 aa12.85□□□□□ -0.35
SF1-202ENST00000334944 SOSTQ9BQB4 213 aa12.85□□□□□ -0.35
SF1-202ENST00000334944 SARGQ9BW04 601 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms