RNA–Protein interactions for RNA: ENST00000334258.9

SYNE3-201, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SYNE3, Length 3,275 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-201ENST00000334258 EPXP11678 715 aa12.73□□□□□ -0.37
SYNE3-201ENST00000334258 ANXA7P20073 488 aaKnown RBP12.73□□□□□ -0.37
SYNE3-201ENST00000334258 TEAD1P28347 426 aa12.73□□□□□ -0.37
SYNE3-201ENST00000334258 DYRK1AQ13627 763 aa12.73□□□□□ -0.37
SYNE3-201ENST00000334258 DECR1Q16698 335 aa12.73□□□□□ -0.37
SYNE3-201ENST00000334258 OR4C11Q6IEV9 310 aa12.73□□□□□ -0.37
SYNE3-201ENST00000334258 OR5J2Q8NH18 312 aa12.73□□□□□ -0.37
SYNE3-201ENST00000334258 SMIM4Q8WVI0 70 aa12.73□□□□□ -0.37
SYNE3-201ENST00000334258 COL26A1Q96A83 441 aa12.73□□□□□ -0.37
SYNE3-201ENST00000334258 OR7D2Q96RA2 312 aa12.73□□□□□ -0.37
SYNE3-201ENST00000334258 CD180Q99467 661 aa12.73□□□□□ -0.37
SYNE3-201ENST00000334258 DPYSL5Q9BPU6 564 aa12.73□□□□□ -0.37
SYNE3-201ENST00000334258 REG4Q9BYZ8 158 aa12.73□□□□□ -0.37
SYNE3-201ENST00000334258 ZDHHC5Q9C0B5 715 aa12.73□□□□□ -0.37
SYNE3-201ENST00000334258 SLC38A1Q9H2H9 487 aa12.73□□□□□ -0.37
SYNE3-201ENST00000334258 ABRACLQ9P1F3 81 aa12.73□□□□□ -0.37
SYNE3-201ENST00000334258 RPH3AQ9Y2J0 694 aaPredicted RBP12.73□□□□□ -0.37
SYNE3-201ENST00000334258 TUBAL3A6NHL2 446 aa12.73□□□□□ -0.37
SYNE3-201ENST00000334258 PRAF2O60831 178 aa12.73□□□□□ -0.37
SYNE3-201ENST00000334258 SAGP10523 405 aaPredicted RBP12.73□□□□□ -0.37
SYNE3-201ENST00000334258 CLDN2P57739 230 aa12.73□□□□□ -0.37
SYNE3-201ENST00000334258 TAS2R43P59537 309 aa12.73□□□□□ -0.37
SYNE3-201ENST00000334258 PRR5P85299 388 aa12.73□□□□□ -0.37
SYNE3-201ENST00000334258 DEFA5Q01523 94 aa12.73□□□□□ -0.37
SYNE3-201ENST00000334258 TP53I3Q53FA7 332 aa12.73□□□□□ -0.37
SYNE3-201ENST00000334258 OR52I2Q8NH67 350 aa12.73□□□□□ -0.37
SYNE3-201ENST00000334258 ADAMTS15Q8TE58 950 aa12.73□□□□□ -0.37
SYNE3-201ENST00000334258 ENKD1Q9H0I2 346 aa12.73□□□□□ -0.37
SYNE3-201ENST00000334258 PCDHB16Q9NRJ7 776 aa12.73□□□□□ -0.37
SYNE3-201ENST00000334258 A0A1W2PS29 197 aa12.73□□□□□ -0.37
SYNE3-201ENST00000334258 UNC119BA6NIH7 251 aa12.73□□□□□ -0.37
SYNE3-201ENST00000334258 SYT5O00445 386 aa12.73□□□□□ -0.37
SYNE3-201ENST00000334258 CREBL2O60519 120 aaPredicted RBP12.73□□□□□ -0.37
SYNE3-201ENST00000334258 TBX19O60806 448 aa12.73□□□□□ -0.37
SYNE3-201ENST00000334258 ATP5A1P25705 553 aaKnown RBP12.73□□□□□ -0.37
SYNE3-201ENST00000334258 MC3RP41968 323 aa12.73□□□□□ -0.37
SYNE3-201ENST00000334258 FRKP42685 505 aaPredicted RBP12.73□□□□□ -0.37
SYNE3-201ENST00000334258 SCRN3Q0VDG4 424 aa12.73□□□□□ -0.37
SYNE3-201ENST00000334258 SLC9A5Q14940 896 aa12.73□□□□□ -0.37
SYNE3-201ENST00000334258 TMEM255AQ5JRV8 349 aa12.73□□□□□ -0.37
SYNE3-201ENST00000334258 HES5Q5TA89 166 aa12.73□□□□□ -0.37
SYNE3-201ENST00000334258 RGS7BPQ6MZT1 257 aaPredicted RBP12.73□□□□□ -0.37
SYNE3-201ENST00000334258 CNOT9Q92600 299 aaKnown RBP12.73□□□□□ -0.37
SYNE3-201ENST00000334258 WDR89Q96FK6 387 aaPredicted RBP12.73□□□□□ -0.37
SYNE3-201ENST00000334258 DERL3Q96Q80 235 aa12.73□□□□□ -0.37
SYNE3-201ENST00000334258 TEAD3Q99594 435 aa12.73□□□□□ -0.37
SYNE3-201ENST00000334258 TIMP4Q99727 224 aa12.73□□□□□ -0.37
SYNE3-201ENST00000334258 C1QTNF2Q9BXJ5 285 aa12.73□□□□□ -0.37
SYNE3-201ENST00000334258 IGFLR1Q9H665 355 aa12.73□□□□□ -0.37
SYNE3-201ENST00000334258 AKAP7Q9P0M2 348 aaPredicted RBP12.73□□□□□ -0.37
SYNE3-201ENST00000334258 NFKBIL1Q9UBC1 381 aaPredicted RBP12.73□□□□□ -0.37
SYNE3-201ENST00000334258 KLK11Q9UBX7 282 aa12.73□□□□□ -0.37
SYNE3-201ENST00000334258 GLS2Q9UI32 602 aa12.73□□□□□ -0.37
SYNE3-201ENST00000334258 FMO6PO60774 539 aa12.72□□□□□ -0.37
SYNE3-201ENST00000334258 ARL6IP5O75915 188 aa12.72□□□□□ -0.37
SYNE3-201ENST00000334258 TGM6O95932 706 aa12.72□□□□□ -0.37
SYNE3-201ENST00000334258 EFEMP2O95967 443 aa12.72□□□□□ -0.37
SYNE3-201ENST00000334258 ADRB1P08588 477 aa12.72□□□□□ -0.37
SYNE3-201ENST00000334258 AP3S2P59780 193 aa12.72□□□□□ -0.37
SYNE3-201ENST00000334258 ZNF805Q5CZA5 627 aa12.72□□□□□ -0.37
SYNE3-201ENST00000334258 C9orf50Q5SZB4 431 aa12.72□□□□□ -0.37
SYNE3-201ENST00000334258 FAM69AQ5T7M9 428 aa12.72□□□□□ -0.37
SYNE3-201ENST00000334258 NHLRC1Q6VVB1 395 aa12.72□□□□□ -0.37
SYNE3-201ENST00000334258 TCEAL8Q8IYN2 117 aa12.72□□□□□ -0.37
SYNE3-201ENST00000334258 PM20D2Q8IYS1 436 aa12.72□□□□□ -0.37
SYNE3-201ENST00000334258 CMTM4Q8IZR5 234 aa12.72□□□□□ -0.37
SYNE3-201ENST00000334258 NUP43Q8NFH3 380 aa12.72□□□□□ -0.37
SYNE3-201ENST00000334258 VN1R2Q8NFZ6 395 aa12.72□□□□□ -0.37
SYNE3-201ENST00000334258 OR51A7Q8NH64 312 aa12.72□□□□□ -0.37
SYNE3-201ENST00000334258 NR4A3Q92570 626 aa12.72□□□□□ -0.37
SYNE3-201ENST00000334258 ORAI1Q96D31 301 aa12.72□□□□□ -0.37
SYNE3-201ENST00000334258 ZNF416Q9BWM5 594 aa12.72□□□□□ -0.37
SYNE3-201ENST00000334258 RHBGQ9H310 441 aa12.72□□□□□ -0.37
SYNE3-201ENST00000334258 GPN1Q9HCN4 374 aaPredicted RBP12.72□□□□□ -0.37
SYNE3-201ENST00000334258 PCDHGA9Q9Y5G4 932 aaKnown RBP12.72□□□□□ -0.37
SYNE3-201ENST00000334258 NPTNQ9Y639 398 aa12.72□□□□□ -0.37
SYNE3-201ENST00000334258 TRIOBPQ9H2D6 2365 aa12.72□□□□□ -0.37
SYNE3-201ENST00000334258 PLSCR5A0PG75 271 aa12.72□□□□□ -0.37
SYNE3-201ENST00000334258 SLC22A31A6NKX4 558 aa12.72□□□□□ -0.37
SYNE3-201ENST00000334258 ANXA2P2A6NMY6 339 aa12.72□□□□□ -0.37
SYNE3-201ENST00000334258 MCRIP1C9JLW8 97 aa12.72□□□□□ -0.37
SYNE3-201ENST00000334258 SIX6O95475 246 aa12.72□□□□□ -0.37
SYNE3-201ENST00000334258 CTSLP07711 333 aa12.72□□□□□ -0.37
SYNE3-201ENST00000334258 HCCSP53701 268 aa12.72□□□□□ -0.37
SYNE3-201ENST00000334258 SIM1P81133 766 aaPredicted RBP12.72□□□□□ -0.37
SYNE3-201ENST00000334258 AGERQ15109 404 aa12.72□□□□□ -0.37
SYNE3-201ENST00000334258 ZNF613Q6PF04 617 aa12.72□□□□□ -0.37
SYNE3-201ENST00000334258 LRFN4Q6PJG9 635 aa12.72□□□□□ -0.37
SYNE3-201ENST00000334258 ZNF454Q8N9F8 522 aa12.72□□□□□ -0.37
SYNE3-201ENST00000334258 OR56A1Q8NGH5 318 aa12.72□□□□□ -0.37
SYNE3-201ENST00000334258 SMPDL3BQ92485 455 aa12.72□□□□□ -0.37
SYNE3-201ENST00000334258 ZBP1Q9H171 429 aa12.72□□□□□ -0.37
SYNE3-201ENST00000334258 IL36AQ9UHA7 158 aa12.72□□□□□ -0.37
SYNE3-201ENST00000334258 ERI3O43414 337 aaKnown RBP12.72□□□□□ -0.37
SYNE3-201ENST00000334258 LCMT2O60294 686 aaKnown RBP12.72□□□□□ -0.37
SYNE3-201ENST00000334258 OLFM2O95897 454 aa12.72□□□□□ -0.37
SYNE3-201ENST00000334258 CA3P07451 260 aa12.72□□□□□ -0.37
SYNE3-201ENST00000334258 PTHLHP12272 177 aa12.72□□□□□ -0.37
SYNE3-201ENST00000334258 HOXB3P14651 431 aaPredicted RBP12.72□□□□□ -0.37
SYNE3-201ENST00000334258 MAT2AP31153 395 aaKnown RBP12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms