RNA–Protein interactions for RNA: ENST00000332345.10

LIMS1-201, Transcript of LIM zinc finger domain containing 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIMS1, Length 1,235 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-201ENST00000332345 CAPRIN1Q14444 709 aaKnown RBP12.58□□□□□ -0.4
LIMS1-201ENST00000332345 ADRM1Q16186 407 aa12.58□□□□□ -0.4
LIMS1-201ENST00000332345 CYP51A1Q16850 503 aa12.58□□□□□ -0.4
LIMS1-201ENST00000332345 CTU2Q2VPK5 515 aaKnown RBP12.58□□□□□ -0.4
LIMS1-201ENST00000332345 NANOGP8Q6NSW7 305 aa12.58□□□□□ -0.4
LIMS1-201ENST00000332345 PPP4R4Q6NUP7 873 aa12.58□□□□□ -0.4
LIMS1-201ENST00000332345 C3orf33Q6P1S2 294 aa12.58□□□□□ -0.4
LIMS1-201ENST00000332345 POMZP3Q6PJE2 187 aa12.58□□□□□ -0.4
LIMS1-201ENST00000332345 PLXDC2Q6UX71 529 aa12.58□□□□□ -0.4
LIMS1-201ENST00000332345 ZNF836Q6ZNA1 936 aa12.58□□□□□ -0.4
LIMS1-201ENST00000332345 SERPINA11Q86U17 422 aa12.58□□□□□ -0.4
LIMS1-201ENST00000332345 MTDHQ86UE4 582 aaKnown RBP12.58□□□□□ -0.4
LIMS1-201ENST00000332345 SNX32Q86XE0 403 aa12.58□□□□□ -0.4
LIMS1-201ENST00000332345 SLC30A8Q8IWU4 369 aa12.58□□□□□ -0.4
LIMS1-201ENST00000332345 C10orf111Q8N326 155 aa12.58□□□□□ -0.4
LIMS1-201ENST00000332345 CLIP4Q8N3C7 705 aa12.58□□□□□ -0.4
LIMS1-201ENST00000332345 BHLHE22Q8NFJ8 381 aaPredicted RBP12.58□□□□□ -0.4
LIMS1-201ENST00000332345 FNDC9Q8TBE3 224 aa12.58□□□□□ -0.4
LIMS1-201ENST00000332345 SLC25A43Q8WUT9 341 aaPredicted RBP12.58□□□□□ -0.4
LIMS1-201ENST00000332345 FIG4Q92562 907 aa12.58□□□□□ -0.4
LIMS1-201ENST00000332345 ZNF524Q96C55 264 aa12.58□□□□□ -0.4
LIMS1-201ENST00000332345 ECSITQ9BQ95 431 aa12.58□□□□□ -0.4
LIMS1-201ENST00000332345 PIGMQ9H3S5 423 aa12.58□□□□□ -0.4
LIMS1-201ENST00000332345 KAT8Q9H7Z6 458 aaKnown RBP12.58□□□□□ -0.4
LIMS1-201ENST00000332345 NANOGQ9H9S0 305 aa12.58□□□□□ -0.4
LIMS1-201ENST00000332345 RNF122Q9H9V4 155 aa12.58□□□□□ -0.4
LIMS1-201ENST00000332345 SLC24A3Q9HC58 644 aa12.58□□□□□ -0.4
LIMS1-201ENST00000332345 ARMCX1Q9P291 453 aa12.58□□□□□ -0.4
LIMS1-201ENST00000332345 FOXD3Q9UJU5 478 aaPredicted RBP12.58□□□□□ -0.4
LIMS1-201ENST00000332345 ANGPT4Q9Y264 503 aa12.58□□□□□ -0.4
LIMS1-201ENST00000332345 PRORSD1PA6NEY8 169 aa12.57□□□□□ -0.4
LIMS1-201ENST00000332345 C19orf84I3L1E1 186 aa12.57□□□□□ -0.4
LIMS1-201ENST00000332345 SNX3O60493 162 aa12.57□□□□□ -0.4
LIMS1-201ENST00000332345 DRD4P21917 467 aa12.57□□□□□ -0.4
LIMS1-201ENST00000332345 PRKAR1BP31321 381 aa12.57□□□□□ -0.4
LIMS1-201ENST00000332345 CLK1P49759 484 aaKnown RBP12.57□□□□□ -0.4
LIMS1-201ENST00000332345 ASCL1P50553 236 aa12.57□□□□□ -0.4
LIMS1-201ENST00000332345 POLR2HP52434 150 aaKnown RBP12.57□□□□□ -0.4
LIMS1-201ENST00000332345 RAC3P60763 192 aa12.57□□□□□ -0.4
LIMS1-201ENST00000332345 REP15Q6BDI9 236 aa12.57□□□□□ -0.4
LIMS1-201ENST00000332345 ZNF787Q6DD87 383 aa12.57□□□□□ -0.4
LIMS1-201ENST00000332345 GCNT2Q8N0V5 402 aa12.57□□□□□ -0.4
LIMS1-201ENST00000332345 OR8J3Q8NGG0 315 aa12.57□□□□□ -0.4
LIMS1-201ENST00000332345 OR10A6Q8NH74 314 aa12.57□□□□□ -0.4
LIMS1-201ENST00000332345 SLC35B4Q969S0 331 aa12.57□□□□□ -0.4
LIMS1-201ENST00000332345 CPNE4Q96A23 557 aaPredicted RBP12.57□□□□□ -0.4
LIMS1-201ENST00000332345 MARVELD3Q96A59 401 aa12.57□□□□□ -0.4
LIMS1-201ENST00000332345 CCDC106Q9BWC9 280 aa12.57□□□□□ -0.4
LIMS1-201ENST00000332345 ENKD1Q9H0I2 346 aa12.57□□□□□ -0.4
LIMS1-201ENST00000332345 CTPS2Q9NRF8 586 aa12.57□□□□□ -0.4
LIMS1-201ENST00000332345 GLRX2Q9NS18 164 aa12.57□□□□□ -0.4
LIMS1-201ENST00000332345 CHRNA9Q9UGM1 479 aa12.57□□□□□ -0.4
LIMS1-201ENST00000332345 CRYBG3Q68DQ2 2970 aa12.57□□□□□ -0.4
LIMS1-201ENST00000332345 A0A1W2PNV4 684 aa12.56□□□□□ -0.4
LIMS1-201ENST00000332345 EEF1E1-BLOC1S5C9J1V9 151 aa12.56□□□□□ -0.4
LIMS1-201ENST00000332345 AP3D1O14617 1153 aa12.56□□□□□ -0.4
LIMS1-201ENST00000332345 EEF1E1O43324 174 aaKnown RBP12.56□□□□□ -0.4
LIMS1-201ENST00000332345 ADAM11O75078 769 aa12.56□□□□□ -0.4
LIMS1-201ENST00000332345 PLGP00747 810 aaPredicted RBP12.56□□□□□ -0.4
LIMS1-201ENST00000332345 GKN3PP0CG01 181 aa12.56□□□□□ -0.4
LIMS1-201ENST00000332345 TFPIP10646 304 aa12.56□□□□□ -0.4
LIMS1-201ENST00000332345 COX4I1P13073 169 aa12.56□□□□□ -0.4
LIMS1-201ENST00000332345 SHC1P29353 583 aa12.56□□□□□ -0.4
LIMS1-201ENST00000332345 PEX19P40855 299 aa12.56□□□□□ -0.4
LIMS1-201ENST00000332345 ACAA2P42765 397 aaKnown RBP12.56□□□□□ -0.4
LIMS1-201ENST00000332345 PLAURQ03405 335 aa12.56□□□□□ -0.4
LIMS1-201ENST00000332345 SELPLGQ14242 412 aa12.56□□□□□ -0.4
LIMS1-201ENST00000332345 FBXL19-AS1Q494R0 122 aa12.56□□□□□ -0.4
LIMS1-201ENST00000332345 WBP2NLQ6ICG8 309 aa12.56□□□□□ -0.4
LIMS1-201ENST00000332345 MEX3BQ6ZN04 569 aaKnown RBP12.56□□□□□ -0.4
LIMS1-201ENST00000332345 ADGRG3Q86Y34 549 aa12.56□□□□□ -0.4
LIMS1-201ENST00000332345 PTOV1Q86YD1 416 aa12.56□□□□□ -0.4
LIMS1-201ENST00000332345 MCEMP1Q8IX19 187 aa12.56□□□□□ -0.4
LIMS1-201ENST00000332345 CNEP1R1Q8N9A8 125 aa12.56□□□□□ -0.4
LIMS1-201ENST00000332345 RELL2Q8NC24 303 aaPredicted RBP12.56□□□□□ -0.4
LIMS1-201ENST00000332345 RNASE6Q93091 150 aaKnown RBP12.56□□□□□ -0.4
LIMS1-201ENST00000332345 CMTM5Q96DZ9 223 aa12.56□□□□□ -0.4
LIMS1-201ENST00000332345 OR5B2Q96R09 309 aa12.56□□□□□ -0.4
LIMS1-201ENST00000332345 TRIM8Q9BZR9 551 aa12.56□□□□□ -0.4
LIMS1-201ENST00000332345 ADAM19Q9H013 955 aa12.56□□□□□ -0.4
LIMS1-201ENST00000332345 EVA1AQ9H8M9 152 aa12.56□□□□□ -0.4
LIMS1-201ENST00000332345 EFCAB1Q9HAE3 211 aa12.56□□□□□ -0.4
LIMS1-201ENST00000332345 SLC13A4Q9UKG4 626 aa12.56□□□□□ -0.4
LIMS1-201ENST00000332345 ADGRG4Q8IZF6 3080 aa12.56□□□□□ -0.4
LIMS1-201ENST00000332345 SULT2B1O00204 365 aa12.55□□□□□ -0.4
LIMS1-201ENST00000332345 TNFSF13O75888 250 aa12.55□□□□□ -0.4
LIMS1-201ENST00000332345 AQP8O94778 261 aa12.55□□□□□ -0.4
LIMS1-201ENST00000332345 CXCR1P25024 350 aa12.55□□□□□ -0.4
LIMS1-201ENST00000332345 TACR3P29371 465 aa12.55□□□□□ -0.4
LIMS1-201ENST00000332345 UQCRC1P31930 480 aa12.55□□□□□ -0.4
LIMS1-201ENST00000332345 KIR2DL2P43627 348 aaPredicted RBP12.55□□□□□ -0.4
LIMS1-201ENST00000332345 CTBP2P56545 445 aa12.55□□□□□ -0.4
LIMS1-201ENST00000332345 CSNK2A1P68400 391 aaPredicted RBP12.55□□□□□ -0.4
LIMS1-201ENST00000332345 RNPS1Q15287 305 aaKnown RBP12.55□□□□□ -0.4
LIMS1-201ENST00000332345 SYT14P1Q58G82 188 aa12.55□□□□□ -0.4
LIMS1-201ENST00000332345 INTS11Q5TA45 600 aaKnown RBP12.55□□□□□ -0.4
LIMS1-201ENST00000332345 DHRS4L2Q6PKH6 230 aa12.55□□□□□ -0.4
LIMS1-201ENST00000332345 TMPPEQ6ZT21 453 aa12.55□□□□□ -0.4
LIMS1-201ENST00000332345 FAM214BQ7L5A3 538 aa12.55□□□□□ -0.4
LIMS1-201ENST00000332345 NET1Q7Z628 596 aaPredicted RBP12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms