RNA–Protein interactions for RNA: ENST00000330188.13

TPM3-206, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-206ENST00000330188 LRIT1Q9P2V4 623 aa13.4□□□□□ -0.26
TPM3-206ENST00000330188 MALT1Q9UDY8 824 aa13.4□□□□□ -0.26
TPM3-206ENST00000330188 SERTAD3Q9UJW9 196 aa13.4□□□□□ -0.26
TPM3-206ENST00000330188 MTCH2Q9Y6C9 303 aa13.4□□□□□ -0.26
TPM3-206ENST00000330188 A8MU76 341 aa13.39□□□□□ -0.27
TPM3-206ENST00000330188 CLDN4O14493 209 aa13.39□□□□□ -0.27
TPM3-206ENST00000330188 WNT1P04628 370 aa13.39□□□□□ -0.27
TPM3-206ENST00000330188 GYPBP06028 91 aa13.39□□□□□ -0.27
TPM3-206ENST00000330188 MAOAP21397 527 aa13.39□□□□□ -0.27
TPM3-206ENST00000330188 NKX2-5P52952 324 aaPredicted RBP13.39□□□□□ -0.27
TPM3-206ENST00000330188 FUT7Q11130 342 aa13.39□□□□□ -0.27
TPM3-206ENST00000330188 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.39□□□□□ -0.272e-17■□□□□ 10.2
TPM3-206ENST00000330188 NDUFAF6Q330K2 333 aa13.39□□□□□ -0.27
TPM3-206ENST00000330188 COL13A1Q5TAT6 717 aaPredicted RBP13.39□□□□□ -0.27
TPM3-206ENST00000330188 SYT13Q7L8C5 426 aa13.39□□□□□ -0.27
TPM3-206ENST00000330188 GPALPP1Q8IXQ4 340 aa13.39□□□□□ -0.27
TPM3-206ENST00000330188 BCORP1Q8N888 145 aa13.39□□□□□ -0.27
TPM3-206ENST00000330188 OR6F1Q8NGZ6 308 aa13.39□□□□□ -0.27
TPM3-206ENST00000330188 SLC2A12Q8TD20 617 aa13.39□□□□□ -0.27
TPM3-206ENST00000330188 SMAP2Q8WU79 429 aaPredicted RBP13.39□□□□□ -0.27
TPM3-206ENST00000330188 C4orf36Q96KX1 117 aa13.39□□□□□ -0.27
TPM3-206ENST00000330188 G6PC3Q9BUM1 346 aa13.39□□□□□ -0.27
TPM3-206ENST00000330188 TPSD1Q9BZJ3 242 aa13.39□□□□□ -0.27
TPM3-206ENST00000330188 OR10A5Q9H207 317 aa13.39□□□□□ -0.27
TPM3-206ENST00000330188 PPIL3Q9H2H8 161 aaKnown RBP13.39□□□□□ -0.27
TPM3-206ENST00000330188 MARCH7Q9H992 704 aa13.39□□□□□ -0.27
TPM3-206ENST00000330188 WDR70Q9NW82 654 aa13.39□□□□□ -0.27
TPM3-206ENST00000330188 RPS6KB2Q9UBS0 482 aa13.39□□□□□ -0.27
TPM3-206ENST00000330188 CHRNA9Q9UGM1 479 aa13.39□□□□□ -0.27
TPM3-206ENST00000330188 IGHV1OR15-9A0A0B4J2B8 117 aa13.39□□□□□ -0.27
TPM3-206ENST00000330188 GNB5O14775 395 aa13.39□□□□□ -0.27
TPM3-206ENST00000330188 PLPP2O43688 288 aa13.39□□□□□ -0.27
TPM3-206ENST00000330188 IFNGP01579 166 aa13.39□□□□□ -0.27
TPM3-206ENST00000330188 HLA-DQB1P01920 261 aa13.39□□□□□ -0.27
TPM3-206ENST00000330188 CHRNB1P11230 501 aa13.39□□□□□ -0.27
TPM3-206ENST00000330188 CD53P19397 219 aa13.39□□□□□ -0.27
TPM3-206ENST00000330188 PTBP1P26599 531 aaKnown RBP eCLIP13.39□□□□□ -0.272e-9■■■■■ 36.6
TPM3-206ENST00000330188 RPS5P46782 204 aaKnown RBP13.39□□□□□ -0.27
TPM3-206ENST00000330188 PGDP52209 483 aa13.39□□□□□ -0.27
TPM3-206ENST00000330188 PSMD4P55036 377 aaKnown RBP13.39□□□□□ -0.27
TPM3-206ENST00000330188 E2F1Q01094 437 aa13.39□□□□□ -0.27
TPM3-206ENST00000330188 RIN1Q13671 783 aa13.39□□□□□ -0.27
TPM3-206ENST00000330188 RSBN1Q5VWQ0 802 aaPredicted RBP13.39□□□□□ -0.27
TPM3-206ENST00000330188 FAAH2Q6GMR7 532 aa13.39□□□□□ -0.27
TPM3-206ENST00000330188 ARL9Q6T311 187 aa13.39□□□□□ -0.27
TPM3-206ENST00000330188 VASH1Q7L8A9 365 aaPredicted RBP13.39□□□□□ -0.27
TPM3-206ENST00000330188 CMIPQ8IY22 773 aa13.39□□□□□ -0.27
TPM3-206ENST00000330188 RDH10Q8IZV5 341 aa13.39□□□□□ -0.27
TPM3-206ENST00000330188 METTL27Q8N6F8 245 aaPredicted RBP13.39□□□□□ -0.27
TPM3-206ENST00000330188 OR5M3Q8NGP4 307 aa13.39□□□□□ -0.27
TPM3-206ENST00000330188 OR4C3Q8NH37 302 aa13.39□□□□□ -0.27
TPM3-206ENST00000330188 FAM174AQ8TBP5 190 aa13.39□□□□□ -0.27
TPM3-206ENST00000330188 MMABQ96EY8 250 aaPredicted RBP13.39□□□□□ -0.27
TPM3-206ENST00000330188 ERMAPQ96PL5 475 aaPredicted RBP13.39□□□□□ -0.27
TPM3-206ENST00000330188 DEPDC7Q96QD5 511 aa13.39□□□□□ -0.27
TPM3-206ENST00000330188 ZNF576Q9H609 170 aa13.39□□□□□ -0.27
TPM3-206ENST00000330188 ERVMER34-1Q9H9K5 563 aa13.39□□□□□ -0.27
TPM3-206ENST00000330188 TMEM184BQ9Y519 407 aaPredicted RBP13.39□□□□□ -0.27
TPM3-206ENST00000330188 MEIOCA2RUB1 952 aa13.38□□□□□ -0.27
TPM3-206ENST00000330188 EFCAB7A8K855 629 aa13.38□□□□□ -0.27
TPM3-206ENST00000330188 J3QLW9 94 aa13.38□□□□□ -0.27
TPM3-206ENST00000330188 ZNF749O43361 778 aa13.38□□□□□ -0.27
TPM3-206ENST00000330188 CLPSP04118 112 aa13.38□□□□□ -0.27
TPM3-206ENST00000330188 CSF2P04141 144 aa13.38□□□□□ -0.27
TPM3-206ENST00000330188 SLC2A2P11168 524 aaPredicted RBP13.38□□□□□ -0.27
TPM3-206ENST00000330188 HIST1H1CP16403 213 aaKnown RBP13.38□□□□□ -0.27
TPM3-206ENST00000330188 ZNF19P17023 458 aa13.38□□□□□ -0.27
TPM3-206ENST00000330188 SHC1P29353 583 aa13.38□□□□□ -0.27
TPM3-206ENST00000330188 OR12D2P58182 307 aa13.38□□□□□ -0.27
TPM3-206ENST00000330188 ELOCQ15369 112 aa13.38□□□□□ -0.27
TPM3-206ENST00000330188 LCN1P1Q5VSP4 162 aa13.38□□□□□ -0.27
TPM3-206ENST00000330188 SSX6Q7RTT6 188 aa13.38□□□□□ -0.27
TPM3-206ENST00000330188 Q8N402 240 aa13.38□□□□□ -0.27
TPM3-206ENST00000330188 ZNF615Q8N8J6 731 aa13.38□□□□□ -0.27
TPM3-206ENST00000330188 SDR9C7Q8NEX9 313 aa13.38□□□□□ -0.27
TPM3-206ENST00000330188 OR52E2Q8NGJ4 325 aa13.38□□□□□ -0.27
TPM3-206ENST00000330188 ACOT12Q8WYK0 555 aa13.38□□□□□ -0.27
TPM3-206ENST00000330188 SGTBQ96EQ0 304 aa13.38□□□□□ -0.27
TPM3-206ENST00000330188 ZNF578Q96N58 590 aaPredicted RBP13.38□□□□□ -0.27
TPM3-206ENST00000330188 UCK1Q9HA47 277 aa13.38□□□□□ -0.27
TPM3-206ENST00000330188 MKKSQ9NPJ1 570 aaPredicted RBP13.38□□□□□ -0.27
TPM3-206ENST00000330188 B3GAT2Q9NPZ5 323 aa13.38□□□□□ -0.27
TPM3-206ENST00000330188 OR10H1Q9Y4A9 318 aa13.38□□□□□ -0.27
TPM3-206ENST00000330188 HEATR5AQ86XA9 2040 aa13.38□□□□□ -0.27
TPM3-206ENST00000330188 A0A087WUJ7 227 aa13.37□□□□□ -0.27
TPM3-206ENST00000330188 SERINC4A6NH21 518 aa13.37□□□□□ -0.27
TPM3-206ENST00000330188 LILRA5A6NI73 299 aa13.37□□□□□ -0.27
TPM3-206ENST00000330188 CHURC1-FNTBB4DL54 471 aa13.37□□□□□ -0.27
TPM3-206ENST00000330188 LRRN3E7EW58 273 aa13.37□□□□□ -0.27
TPM3-206ENST00000330188 TFECO14948 347 aaPredicted RBP13.37□□□□□ -0.27
TPM3-206ENST00000330188 SLC19A2O60779 497 aa13.37□□□□□ -0.27
TPM3-206ENST00000330188 NDUFB2O95178 105 aa13.37□□□□□ -0.27
TPM3-206ENST00000330188 CSTAP01040 98 aa13.37□□□□□ -0.27
TPM3-206ENST00000330188 F8A1P23610 371 aa13.37□□□□□ -0.27
TPM3-206ENST00000330188 MLLT3P42568 568 aaPredicted RBP13.37□□□□□ -0.27
TPM3-206ENST00000330188 NR4A2P43354 598 aa13.37□□□□□ -0.27
TPM3-206ENST00000330188 FNTBP49356 437 aa13.37□□□□□ -0.27
TPM3-206ENST00000330188 GPR143P51810 404 aa13.37□□□□□ -0.27
TPM3-206ENST00000330188 GFERP55789 205 aa13.37□□□□□ -0.27
TPM3-206ENST00000330188 TAS2R43P59537 309 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms