RNA–Protein interactions for RNA: ENST00000324862.6

PRPF3-201, Transcript of pre-mRNA processing factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF3, Length 2,433 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-201ENST00000324862 SP1P08047 785 aa13.86□□□□□ -0.19
PRPF3-201ENST00000324862 IGFBP1P08833 259 aaPredicted RBP13.86□□□□□ -0.19
PRPF3-201ENST00000324862 GCKP35557 465 aa13.86□□□□□ -0.19
PRPF3-201ENST00000324862 TNFSF10P50591 281 aa13.86□□□□□ -0.19
PRPF3-201ENST00000324862 RPP38P78345 283 aaKnown RBP13.86□□□□□ -0.19
PRPF3-201ENST00000324862 TOMM20Q15388 145 aa13.86□□□□□ -0.19
PRPF3-201ENST00000324862 C1QL3Q5VWW1 255 aa13.86□□□□□ -0.19
PRPF3-201ENST00000324862 PPP4R4Q6NUP7 873 aa13.86□□□□□ -0.19
PRPF3-201ENST00000324862 PGBD2Q6P3X8 592 aa13.86□□□□□ -0.19
PRPF3-201ENST00000324862 ATG4DQ86TL0 474 aaPredicted RBP13.86□□□□□ -0.19
PRPF3-201ENST00000324862 ATG16L2Q8NAA4 619 aa13.86□□□□□ -0.19
PRPF3-201ENST00000324862 SLC38A4Q969I6 547 aa13.86□□□□□ -0.19
PRPF3-201ENST00000324862 FAM46AQ96IP4 442 aaKnown RBP13.86□□□□□ -0.19
PRPF3-201ENST00000324862 OSBPL10Q9BXB5 764 aa13.86□□□□□ -0.19
PRPF3-201ENST00000324862 TMEM185BQ9H7F4 350 aa13.86□□□□□ -0.19
PRPF3-201ENST00000324862 SDHAF3Q9NRP4 125 aa13.86□□□□□ -0.19
PRPF3-201ENST00000324862 TMCC3Q9ULS5 477 aa13.86□□□□□ -0.19
PRPF3-201ENST00000324862 IGKV1D-42A0A075B6H8 117 aa13.85□□□□□ -0.19
PRPF3-201ENST00000324862 IGLV3-32A0A0A0MS00 114 aa13.85□□□□□ -0.19
PRPF3-201ENST00000324862 EFNA2O43921 213 aa13.85□□□□□ -0.19
PRPF3-201ENST00000324862 SNAP29O95721 258 aa13.85□□□□□ -0.19
PRPF3-201ENST00000324862 EPHA2P29317 976 aa13.85□□□□□ -0.19
PRPF3-201ENST00000324862 GPR4P46093 362 aa13.85□□□□□ -0.19
PRPF3-201ENST00000324862 SLC6A8P48029 635 aa13.85□□□□□ -0.19
PRPF3-201ENST00000324862 ARHGDIAP52565 204 aa13.85□□□□□ -0.19
PRPF3-201ENST00000324862 PMP22Q01453 160 aa13.85□□□□□ -0.19
PRPF3-201ENST00000324862 DAG1Q14118 895 aa13.85□□□□□ -0.19
PRPF3-201ENST00000324862 ITPR1Q14643 2758 aa13.85□□□□□ -0.19
PRPF3-201ENST00000324862 BROXQ5VW32 411 aa13.85□□□□□ -0.19
PRPF3-201ENST00000324862 HIPK1Q86Z02 1210 aa13.85□□□□□ -0.19
PRPF3-201ENST00000324862 GPALPP1Q8IXQ4 340 aa13.85□□□□□ -0.19
PRPF3-201ENST00000324862 SVOPLQ8N434 492 aa13.85□□□□□ -0.19
PRPF3-201ENST00000324862 ATP6V1C2Q8NEY4 427 aa13.85□□□□□ -0.19
PRPF3-201ENST00000324862 OR2M7Q8NG81 312 aa13.85□□□□□ -0.19
PRPF3-201ENST00000324862 POC1BQ8TC44 478 aa13.85□□□□□ -0.19
PRPF3-201ENST00000324862 TMEM239Q8WW34 195 aa13.85□□□□□ -0.19
PRPF3-201ENST00000324862 ADAM19Q9H013 955 aa13.85□□□□□ -0.19
PRPF3-201ENST00000324862 PEX1O43933 1283 aa13.85□□□□□ -0.19
PRPF3-201ENST00000324862 SNX4O95219 450 aa13.85□□□□□ -0.19
PRPF3-201ENST00000324862 CELA3AP09093 270 aa13.85□□□□□ -0.19
PRPF3-201ENST00000324862 CNR1P21554 472 aa13.85□□□□□ -0.19
PRPF3-201ENST00000324862 EGR4Q05215 589 aa13.85□□□□□ -0.19
PRPF3-201ENST00000324862 MERTKQ12866 999 aa13.85□□□□□ -0.19
PRPF3-201ENST00000324862 TBR1Q16650 682 aa13.85□□□□□ -0.19
PRPF3-201ENST00000324862 PLPPR5Q32ZL2 321 aa13.85□□□□□ -0.19
PRPF3-201ENST00000324862 SLC25A25Q6KCM7 469 aa13.85□□□□□ -0.19
PRPF3-201ENST00000324862 IGFL2Q6UWQ7 119 aa13.85□□□□□ -0.19
PRPF3-201ENST00000324862 LINC00114Q6XXX2 140 aa13.85□□□□□ -0.19
PRPF3-201ENST00000324862 Q6ZPB1 254 aaPredicted RBP13.85□□□□□ -0.19
PRPF3-201ENST00000324862 PNPLA5Q7Z6Z6 429 aaPredicted RBP13.85□□□□□ -0.19
PRPF3-201ENST00000324862 ACOT11Q8WXI4 607 aaPredicted RBP13.85□□□□□ -0.19
PRPF3-201ENST00000324862 SDCCAG3Q96C92 435 aa13.85□□□□□ -0.19
PRPF3-201ENST00000324862 C1GALT1C1Q96EU7 318 aa13.85□□□□□ -0.19
PRPF3-201ENST00000324862 SMAD5Q99717 465 aaKnown RBP13.85□□□□□ -0.19
PRPF3-201ENST00000324862 OR11A1Q9GZK7 315 aa13.85□□□□□ -0.19
PRPF3-201ENST00000324862 TPRP12270 2363 aaKnown RBP13.85□□□□□ -0.19
PRPF3-201ENST00000324862 A0A087WUJ7 227 aa13.84□□□□□ -0.19
PRPF3-201ENST00000324862 FAM166BA8MTA8 275 aa13.84□□□□□ -0.19
PRPF3-201ENST00000324862 CDC42EP2O14613 210 aa13.84□□□□□ -0.19
PRPF3-201ENST00000324862 PEPDP12955 493 aa13.84□□□□□ -0.19
PRPF3-201ENST00000324862 GP1BBP13224 206 aa13.84□□□□□ -0.19
PRPF3-201ENST00000324862 DPP4P27487 766 aa13.84□□□□□ -0.19
PRPF3-201ENST00000324862 IFNA8P32881 189 aa13.84□□□□□ -0.19
PRPF3-201ENST00000324862 ALDH3A2P51648 485 aa13.84□□□□□ -0.19
PRPF3-201ENST00000324862 TMPRSS3P57727 454 aa13.84□□□□□ -0.19
PRPF3-201ENST00000324862 ZNF766Q5HY98 468 aa13.84□□□□□ -0.19
PRPF3-201ENST00000324862 BORAQ6PGQ7 559 aa13.84□□□□□ -0.19
PRPF3-201ENST00000324862 YRDCQ86U90 279 aaKnown RBP13.84□□□□□ -0.19
PRPF3-201ENST00000324862 ADGRG3Q86Y34 549 aa13.84□□□□□ -0.19
PRPF3-201ENST00000324862 ABHD17AQ96GS6 310 aa13.84□□□□□ -0.19
PRPF3-201ENST00000324862 TMEM41AQ96HV5 264 aa13.84□□□□□ -0.19
PRPF3-201ENST00000324862 MFRPQ9BY79 579 aa13.84□□□□□ -0.19
PRPF3-201ENST00000324862 A0A087WV48 116 aa13.84□□□□□ -0.19
PRPF3-201ENST00000324862 ELOA3DA6NLF2 546 aaPredicted RBP13.84□□□□□ -0.19
PRPF3-201ENST00000324862 FAAHO00519 579 aa13.84□□□□□ -0.19
PRPF3-201ENST00000324862 NME2P1O60361 137 aa13.84□□□□□ -0.19
PRPF3-201ENST00000324862 UQCRBP14927 111 aa13.84□□□□□ -0.19
PRPF3-201ENST00000324862 ENDOUP21128 410 aaKnown RBP13.84□□□□□ -0.19
PRPF3-201ENST00000324862 NME2P22392 152 aa13.84□□□□□ -0.19
PRPF3-201ENST00000324862 CBLP22681 906 aa13.84□□□□□ -0.19
PRPF3-201ENST00000324862 ZNF41P51814 821 aaPredicted RBP13.84□□□□□ -0.19
PRPF3-201ENST00000324862 C19orf57Q0VDD7 668 aa13.84□□□□□ -0.19
PRPF3-201ENST00000324862 ELOA3BQ3SY89 546 aa13.84□□□□□ -0.19
PRPF3-201ENST00000324862 FAHD1Q6P587 224 aa13.84□□□□□ -0.19
PRPF3-201ENST00000324862 ELOA3Q8NG57 546 aa13.84□□□□□ -0.19
PRPF3-201ENST00000324862 DNAJA4Q8WW22 397 aaPredicted RBP13.84□□□□□ -0.19
PRPF3-201ENST00000324862 ZNF426Q9BUY5 554 aa13.84□□□□□ -0.19
PRPF3-201ENST00000324862 LUZP4Q9P127 313 aa13.84□□□□□ -0.19
PRPF3-201ENST00000324862 KIF17Q9P2E2 1029 aa13.84□□□□□ -0.19
PRPF3-201ENST00000324862 TMEM72A0PK05 275 aa13.83□□□□□ -0.19
PRPF3-201ENST00000324862 ZIC3O60481 467 aa13.83□□□□□ -0.19
PRPF3-201ENST00000324862 WISP2O76076 250 aa13.83□□□□□ -0.19
PRPF3-201ENST00000324862 SOX14O95416 240 aa13.83□□□□□ -0.19
PRPF3-201ENST00000324862 CLIC3O95833 236 aa13.83□□□□□ -0.19
PRPF3-201ENST00000324862 MAKP20794 623 aa13.83□□□□□ -0.19
PRPF3-201ENST00000324862 OMPP47874 163 aa13.83□□□□□ -0.19
PRPF3-201ENST00000324862 SMIM11AP58511 58 aa13.83□□□□□ -0.19
PRPF3-201ENST00000324862 CRYZQ08257 329 aaKnown RBP13.83□□□□□ -0.19
PRPF3-201ENST00000324862 KDM4DQ6B0I6 523 aa13.83□□□□□ -0.19
PRPF3-201ENST00000324862 MBOAT2Q6ZWT7 520 aa13.83□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms