RNA–Protein interactions for RNA: ENST00000321117.9

DNMT3A-202, Transcript of DNA methyltransferase 3 alpha, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene DNMT3A, Length 4,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-202ENST00000321117 GNRH1P01148 92 aa11.85□□□□□ -0.51
DNMT3A-202ENST00000321117 BCL6P41182 706 aa11.85□□□□□ -0.51
DNMT3A-202ENST00000321117 CLDN12P56749 244 aa11.85□□□□□ -0.51
DNMT3A-202ENST00000321117 SHC2P98077 582 aa11.85□□□□□ -0.51
DNMT3A-202ENST00000321117 NIPAL3Q6P499 406 aa11.85□□□□□ -0.51
DNMT3A-202ENST00000321117 RPL22L1Q6P5R6 122 aaKnown RBP11.85□□□□□ -0.51
DNMT3A-202ENST00000321117 ALKAL2Q6UX46 152 aa11.85□□□□□ -0.51
DNMT3A-202ENST00000321117 TMEM17Q86X19 198 aa11.85□□□□□ -0.51
DNMT3A-202ENST00000321117 PHOSPHO1Q8TCT1 267 aa11.85□□□□□ -0.51
DNMT3A-202ENST00000321117 OR14A2Q96R54 314 aa11.85□□□□□ -0.51
DNMT3A-202ENST00000321117 LSM2Q9Y333 95 aaKnown RBP11.85□□□□□ -0.51
DNMT3A-202ENST00000321117 GPRIN2O60269 458 aa11.85□□□□□ -0.51
DNMT3A-202ENST00000321117 MSL3P1P0C860 447 aa11.85□□□□□ -0.51
DNMT3A-202ENST00000321117 RPS21P63220 83 aaKnown RBP11.85□□□□□ -0.51
DNMT3A-202ENST00000321117 ZMYND11Q15326 602 aa11.85□□□□□ -0.51
DNMT3A-202ENST00000321117 RAB12Q6IQ22 244 aa11.85□□□□□ -0.51
DNMT3A-202ENST00000321117 LEG1Q6P5S2 330 aa11.85□□□□□ -0.51
DNMT3A-202ENST00000321117 TEX261Q6UWH6 196 aa11.85□□□□□ -0.51
DNMT3A-202ENST00000321117 BEST3Q8N1M1 668 aa11.85□□□□□ -0.51
DNMT3A-202ENST00000321117 GATSQ8NAP1 163 aa11.85□□□□□ -0.51
DNMT3A-202ENST00000321117 OR4D11Q8NGI4 311 aa11.85□□□□□ -0.51
DNMT3A-202ENST00000321117 OR5AK2Q8NH90 309 aa11.85□□□□□ -0.51
DNMT3A-202ENST00000321117 THRSPQ92748 146 aa11.85□□□□□ -0.51
DNMT3A-202ENST00000321117 DGAT2Q96PD7 388 aa11.85□□□□□ -0.51
DNMT3A-202ENST00000321117 TNFRSF13CQ96RJ3 184 aa11.85□□□□□ -0.51
DNMT3A-202ENST00000321117 GAL3ST4Q96RP7 486 aa11.85□□□□□ -0.51
DNMT3A-202ENST00000321117 MRI1Q9BV20 369 aa11.85□□□□□ -0.51
DNMT3A-202ENST00000321117 OR52A5Q9H2C5 316 aa11.85□□□□□ -0.51
DNMT3A-202ENST00000321117 IFT46Q9NQC8 304 aa11.85□□□□□ -0.51
DNMT3A-202ENST00000321117 U3KQ87 197 aa11.85□□□□□ -0.51
DNMT3A-202ENST00000321117 DICER1Q9UPY3 1922 aaKnown RBP11.85□□□□□ -0.51
DNMT3A-202ENST00000321117 TRAV18A0A075B6X5 111 aa11.85□□□□□ -0.51
DNMT3A-202ENST00000321117 F5H5P2 479 aa11.85□□□□□ -0.51
DNMT3A-202ENST00000321117 GOSR2O14653 212 aa11.85□□□□□ -0.51
DNMT3A-202ENST00000321117 OLFM2O95897 454 aa11.85□□□□□ -0.51
DNMT3A-202ENST00000321117 CTSLP07711 333 aa11.85□□□□□ -0.51
DNMT3A-202ENST00000321117 CTGFP29279 349 aa11.85□□□□□ -0.51
DNMT3A-202ENST00000321117 EPHA5P54756 1037 aa11.85□□□□□ -0.51
DNMT3A-202ENST00000321117 EEF1A2Q05639 463 aaKnown RBP11.85□□□□□ -0.51
DNMT3A-202ENST00000321117 EXOSC2Q13868 293 aaKnown RBP11.85□□□□□ -0.51
DNMT3A-202ENST00000321117 CST6Q15828 149 aa11.85□□□□□ -0.51
DNMT3A-202ENST00000321117 MFSD12Q6NUT3 480 aa11.85□□□□□ -0.51
DNMT3A-202ENST00000321117 SLC25A36Q96CQ1 311 aa11.85□□□□□ -0.51
DNMT3A-202ENST00000321117 ATG5Q9H1Y0 275 aa11.85□□□□□ -0.51
DNMT3A-202ENST00000321117 NRIP3Q9NQ35 241 aa11.85□□□□□ -0.51
DNMT3A-202ENST00000321117 PLEKHA6Q9Y2H5 1048 aa11.85□□□□□ -0.51
DNMT3A-202ENST00000321117 ATP1B1P05026 303 aa11.84□□□□□ -0.51
DNMT3A-202ENST00000321117 M6PRP20645 277 aa11.84□□□□□ -0.51
DNMT3A-202ENST00000321117 NFYAP23511 347 aaPredicted RBP11.84□□□□□ -0.51
DNMT3A-202ENST00000321117 ITPRIPL2Q3MIP1 535 aa11.84□□□□□ -0.51
DNMT3A-202ENST00000321117 ZC3H14Q6PJT7 736 aaKnown RBP11.84□□□□□ -0.51
DNMT3A-202ENST00000321117 ESPNLQ6ZVH7 1005 aa11.84□□□□□ -0.51
DNMT3A-202ENST00000321117 TAF8Q7Z7C8 310 aa11.84□□□□□ -0.51
DNMT3A-202ENST00000321117 TMEM150AQ86TG1 271 aa11.84□□□□□ -0.51
DNMT3A-202ENST00000321117 OR10H5Q8NGA6 315 aa11.84□□□□□ -0.51
DNMT3A-202ENST00000321117 OR2L8Q8NGY9 312 aa11.84□□□□□ -0.51
DNMT3A-202ENST00000321117 OR4Q3Q8NH05 313 aa11.84□□□□□ -0.51
DNMT3A-202ENST00000321117 HERVK_113Q902F9 699 aa11.84□□□□□ -0.51
DNMT3A-202ENST00000321117 SERINC2Q96SA4 455 aa11.84□□□□□ -0.51
DNMT3A-202ENST00000321117 TMEM106CQ9BVX2 250 aa11.84□□□□□ -0.51
DNMT3A-202ENST00000321117 MFFQ9GZY8 342 aa11.84□□□□□ -0.51
DNMT3A-202ENST00000321117 CBLCQ9ULV8 474 aa11.84□□□□□ -0.51
DNMT3A-202ENST00000321117 CHP2O43745 196 aa11.84□□□□□ -0.51
DNMT3A-202ENST00000321117 CDC40O60508 579 aaKnown RBP eCLIP11.84□□□□□ -0.51
DNMT3A-202ENST00000321117 LDB3O75112 727 aa11.84□□□□□ -0.51
DNMT3A-202ENST00000321117 HOXB9P17482 250 aaPredicted RBP11.84□□□□□ -0.51
DNMT3A-202ENST00000321117 FUT1P19526 365 aa11.84□□□□□ -0.51
DNMT3A-202ENST00000321117 CCR9P51686 369 aa11.84□□□□□ -0.51
DNMT3A-202ENST00000321117 CRYBA2P53672 197 aa11.84□□□□□ -0.51
DNMT3A-202ENST00000321117 PRMT2P55345 433 aa11.84□□□□□ -0.51
DNMT3A-202ENST00000321117 CAMK2BQ13554 666 aa11.84□□□□□ -0.51
DNMT3A-202ENST00000321117 GK2Q14410 553 aaPredicted RBP11.84□□□□□ -0.51
DNMT3A-202ENST00000321117 LYPD8Q6UX82 237 aa11.84□□□□□ -0.51
DNMT3A-202ENST00000321117 SYT9Q86SS6 491 aa11.84□□□□□ -0.51
DNMT3A-202ENST00000321117 WASH6PQ9NQA3 447 aa11.84□□□□□ -0.51
DNMT3A-202ENST00000321117 SLC39A1Q9NY26 324 aa11.84□□□□□ -0.51
DNMT3A-202ENST00000321117 TESQ9UGI8 421 aaKnown RBP11.84□□□□□ -0.51
DNMT3A-202ENST00000321117 PRAMEF25A6NGN4 478 aa11.84□□□□□ -0.51
DNMT3A-202ENST00000321117 CYB5AP00167 134 aa11.84□□□□□ -0.51
DNMT3A-202ENST00000321117 ADH1BP00325 375 aa11.84□□□□□ -0.51
DNMT3A-202ENST00000321117 RAB40ALP0C0E4 278 aa11.84□□□□□ -0.51
DNMT3A-202ENST00000321117 OR2T7P0C7T2 308 aa11.84□□□□□ -0.51
DNMT3A-202ENST00000321117 AGTR1P30556 359 aa11.84□□□□□ -0.51
DNMT3A-202ENST00000321117 OC90Q02509 493 aaPredicted RBP11.84□□□□□ -0.51
DNMT3A-202ENST00000321117 TCEAL5Q5H9L2 206 aa11.84□□□□□ -0.51
DNMT3A-202ENST00000321117 METRNLQ641Q3 311 aa11.84□□□□□ -0.51
DNMT3A-202ENST00000321117 ELP2Q6IA86 826 aa11.84□□□□□ -0.51
DNMT3A-202ENST00000321117 CCSAPQ6IQ19 270 aaPredicted RBP11.84□□□□□ -0.51
DNMT3A-202ENST00000321117 ZNF770Q6IQ21 691 aaPredicted RBP11.84□□□□□ -0.51
DNMT3A-202ENST00000321117 ZCCHC12Q6PEW1 402 aa11.84□□□□□ -0.51
DNMT3A-202ENST00000321117 KANSL1Q7Z3B3 1105 aa11.84□□□□□ -0.51
DNMT3A-202ENST00000321117 SIRT6Q8N6T7 355 aa11.84□□□□□ -0.51
DNMT3A-202ENST00000321117 OR2T27Q8NH04 317 aa11.84□□□□□ -0.51
DNMT3A-202ENST00000321117 RAB40AQ8WXH6 277 aa11.84□□□□□ -0.51
DNMT3A-202ENST00000321117 MS4A6EQ96DS6 147 aa11.84□□□□□ -0.51
DNMT3A-202ENST00000321117 RADILQ96JH8 1075 aa11.84□□□□□ -0.51
DNMT3A-202ENST00000321117 SEC22CQ9BRL7 303 aa11.84□□□□□ -0.51
DNMT3A-202ENST00000321117 FZD3Q9NPG1 666 aa11.84□□□□□ -0.51
DNMT3A-202ENST00000321117 ZBTB32Q9Y2Y4 487 aaPredicted RBP11.84□□□□□ -0.51
DNMT3A-202ENST00000321117 LALBAP00709 142 aa11.83□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms