RNA–Protein interactions for RNA: ENST00000319533.9

RPP40-201, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 1 (best) BASIC

Gene RPP40, Length 1,088 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-201ENST00000319533 AKTIPQ9H8T0 292 aa12.59□□□□□ -0.39
RPP40-201ENST00000319533 BARX1Q9HBU1 254 aaPredicted RBP12.59□□□□□ -0.39
RPP40-201ENST00000319533 THAP1Q9NVV9 213 aa12.59□□□□□ -0.39
RPP40-201ENST00000319533 KLHL9Q9P2J3 617 aa12.59□□□□□ -0.39
RPP40-201ENST00000319533 DTNAQ9Y4J8 743 aa12.59□□□□□ -0.39
RPP40-201ENST00000319533 A0A096LNT2 108 aa12.58□□□□□ -0.4
RPP40-201ENST00000319533 ZNF724A8MTY0 619 aa12.58□□□□□ -0.4
RPP40-201ENST00000319533 EIF4E2O60573 245 aaKnown RBP12.58□□□□□ -0.4
RPP40-201ENST00000319533 CYTIPO60759 359 aa12.58□□□□□ -0.4
RPP40-201ENST00000319533 NDUFS7O75251 213 aa12.58□□□□□ -0.4
RPP40-201ENST00000319533 TP53P04637 393 aaPredicted RBP12.58□□□□□ -0.4
RPP40-201ENST00000319533 KRT16P08779 473 aa12.58□□□□□ -0.4
RPP40-201ENST00000319533 LAMP1P11279 417 aa12.58□□□□□ -0.4
RPP40-201ENST00000319533 CCT3P49368 545 aaKnown RBP12.58□□□□□ -0.4
RPP40-201ENST00000319533 LSM12Q3MHD2 195 aaKnown RBP12.58□□□□□ -0.4
RPP40-201ENST00000319533 SPDYE7PQ495Y7 208 aa12.58□□□□□ -0.4
RPP40-201ENST00000319533 TIMM23BQ5SRD1 257 aa12.58□□□□□ -0.4
RPP40-201ENST00000319533 HMBOX1Q6NT76 420 aa12.58□□□□□ -0.4
RPP40-201ENST00000319533 P2RY8Q86VZ1 359 aa12.58□□□□□ -0.4
RPP40-201ENST00000319533 LRRC34Q8IZ02 419 aa12.58□□□□□ -0.4
RPP40-201ENST00000319533 KRTCAP2Q8N6L1 136 aa12.58□□□□□ -0.4
RPP40-201ENST00000319533 TOR1AIP2Q8NFQ8 470 aa12.58□□□□□ -0.4
RPP40-201ENST00000319533 OR56A1Q8NGH5 318 aa12.58□□□□□ -0.4
RPP40-201ENST00000319533 OR5W2Q8NH69 310 aa12.58□□□□□ -0.4
RPP40-201ENST00000319533 ADAMTS15Q8TE58 950 aa12.58□□□□□ -0.4
RPP40-201ENST00000319533 COQ8BQ96D53 544 aa12.58□□□□□ -0.4
RPP40-201ENST00000319533 BHLHE41Q9C0J9 482 aaPredicted RBP12.58□□□□□ -0.4
RPP40-201ENST00000319533 PNPOQ9NVS9 261 aa12.58□□□□□ -0.4
RPP40-201ENST00000319533 CISD1Q9NZ45 108 aaKnown RBP12.58□□□□□ -0.4
RPP40-201ENST00000319533 PRSS50Q9UI38 385 aa12.58□□□□□ -0.4
RPP40-201ENST00000319533 KCNE3Q9Y6H6 103 aa12.58□□□□□ -0.4
RPP40-201ENST00000319533 IGHV3-15A0A0B4J1V0 119 aa12.57□□□□□ -0.4
RPP40-201ENST00000319533 NPIPA5A0A0B4J1W7 369 aa12.57□□□□□ -0.4
RPP40-201ENST00000319533 TRPC5OSA6NMA1 111 aa12.57□□□□□ -0.4
RPP40-201ENST00000319533 NPIPA7E9PJI5 369 aa12.57□□□□□ -0.4
RPP40-201ENST00000319533 SLCO1B7G3V0H7 640 aa12.57□□□□□ -0.4
RPP40-201ENST00000319533 SMAD9O15198 467 aaKnown RBP12.57□□□□□ -0.4
RPP40-201ENST00000319533 CFLARO15519 480 aa12.57□□□□□ -0.4
RPP40-201ENST00000319533 RAMP1O60894 148 aa12.57□□□□□ -0.4
RPP40-201ENST00000319533 ADAM11O75078 769 aa12.57□□□□□ -0.4
RPP40-201ENST00000319533 NUDT14O95848 222 aa12.57□□□□□ -0.4
RPP40-201ENST00000319533 IFNA2P01563 188 aa12.57□□□□□ -0.4
RPP40-201ENST00000319533 NPIPA8P0DM63 369 aa12.57□□□□□ -0.4
RPP40-201ENST00000319533 LBPP18428 481 aa12.57□□□□□ -0.4
RPP40-201ENST00000319533 EDNRAP25101 427 aa12.57□□□□□ -0.4
RPP40-201ENST00000319533 CLDN8P56748 225 aa12.57□□□□□ -0.4
RPP40-201ENST00000319533 C21orf58P58505 322 aa12.57□□□□□ -0.4
RPP40-201ENST00000319533 RASGEF1BQ0VAM2 473 aa12.57□□□□□ -0.4
RPP40-201ENST00000319533 FAPQ12884 760 aa12.57□□□□□ -0.4
RPP40-201ENST00000319533 PPA1Q15181 289 aa12.57□□□□□ -0.4
RPP40-201ENST00000319533 PGS1Q32NB8 556 aa12.57□□□□□ -0.4
RPP40-201ENST00000319533 NDUFAF6Q330K2 333 aa12.57□□□□□ -0.4
RPP40-201ENST00000319533 RIMKLAQ8IXN7 391 aa12.57□□□□□ -0.4
RPP40-201ENST00000319533 SFXN5Q8TD22 340 aa12.57□□□□□ -0.4
RPP40-201ENST00000319533 MOAP1Q96BY2 351 aa12.57□□□□□ -0.4
RPP40-201ENST00000319533 CHMP6Q96FZ7 201 aa12.57□□□□□ -0.4
RPP40-201ENST00000319533 RADILQ96JH8 1075 aa12.57□□□□□ -0.4
RPP40-201ENST00000319533 DUSP26Q9BV47 211 aa12.57□□□□□ -0.4
RPP40-201ENST00000319533 DPY30Q9C005 99 aa12.57□□□□□ -0.4
RPP40-201ENST00000319533 NMUR2Q9GZQ4 415 aa12.57□□□□□ -0.4
RPP40-201ENST00000319533 MANSC1Q9H8J5 431 aa12.57□□□□□ -0.4
RPP40-201ENST00000319533 MEAF6Q9HAF1 191 aa12.57□□□□□ -0.4
RPP40-201ENST00000319533 FAIMQ9NVQ4 179 aa12.57□□□□□ -0.4
RPP40-201ENST00000319533 GDF2Q9UK05 429 aaPredicted RBP12.57□□□□□ -0.4
RPP40-201ENST00000319533 PLCE1Q9P212 2302 aa12.57□□□□□ -0.4
RPP40-201ENST00000319533 IGKV3D-15A0A087WSY6 115 aa12.56□□□□□ -0.4
RPP40-201ENST00000319533 A0A1W2PNR3 127 aa12.56□□□□□ -0.4
RPP40-201ENST00000319533 GTPBP1O00178 669 aaKnown RBP12.56□□□□□ -0.4
RPP40-201ENST00000319533 HDAC3O15379 428 aa12.56□□□□□ -0.4
RPP40-201ENST00000319533 ZNF264O43296 627 aa12.56□□□□□ -0.4
RPP40-201ENST00000319533 SNNO75324 88 aaPredicted RBP12.56□□□□□ -0.4
RPP40-201ENST00000319533 LYZL6O75951 148 aa12.56□□□□□ -0.4
RPP40-201ENST00000319533 H6PDO95479 791 aa12.56□□□□□ -0.4
RPP40-201ENST00000319533 C6orf47O95873 294 aa12.56□□□□□ -0.4
RPP40-201ENST00000319533 IGHV1-2P23083 117 aa12.56□□□□□ -0.4
RPP40-201ENST00000319533 SLC7A1P30825 629 aa12.56□□□□□ -0.4
RPP40-201ENST00000319533 RNF144AP50876 292 aaPredicted RBP12.56□□□□□ -0.4
RPP40-201ENST00000319533 PDK3Q15120 406 aa12.56□□□□□ -0.4
RPP40-201ENST00000319533 QPRTQ15274 297 aa12.56□□□□□ -0.4
RPP40-201ENST00000319533 NRF1Q16656 503 aa12.56□□□□□ -0.4
RPP40-201ENST00000319533 C3orf33Q6P1S2 294 aa12.56□□□□□ -0.4
RPP40-201ENST00000319533 ATP6V1C2Q8NEY4 427 aa12.56□□□□□ -0.4
RPP40-201ENST00000319533 OR10H5Q8NGA6 315 aa12.56□□□□□ -0.4
RPP40-201ENST00000319533 MUCL1Q96DR8 90 aa12.56□□□□□ -0.4
RPP40-201ENST00000319533 HS6ST2Q96MM7 605 aa12.56□□□□□ -0.4
RPP40-201ENST00000319533 ZNF300Q96RE9 604 aaPredicted RBP12.56□□□□□ -0.4
RPP40-201ENST00000319533 SDF2Q99470 211 aa12.56□□□□□ -0.4
RPP40-201ENST00000319533 LAT2Q9GZY6 243 aa12.56□□□□□ -0.4
RPP40-201ENST00000319533 ALG2Q9H553 416 aa12.56□□□□□ -0.4
RPP40-201ENST00000319533 YAE1D1Q9NRH1 226 aa12.56□□□□□ -0.4
RPP40-201ENST00000319533 NPAP1Q9NZP6 1156 aa12.56□□□□□ -0.4
RPP40-201ENST00000319533 MARCOQ9UEW3 520 aaPredicted RBP12.56□□□□□ -0.4
RPP40-201ENST00000319533 FAF1Q9UNN5 650 aaPredicted RBP12.56□□□□□ -0.4
RPP40-201ENST00000319533 B3GALT5Q9Y2C3 310 aa12.56□□□□□ -0.4
RPP40-201ENST00000319533 NUP214P35658 2090 aaPredicted RBP12.56□□□□□ -0.4
RPP40-201ENST00000319533 SERINC4A6NH21 518 aa12.55□□□□□ -0.4
RPP40-201ENST00000319533 OR5H1A6NKK0 313 aa12.55□□□□□ -0.4
RPP40-201ENST00000319533 A8MV72 311 aaPredicted RBP12.55□□□□□ -0.4
RPP40-201ENST00000319533 KITP10721 976 aa12.55□□□□□ -0.4
RPP40-201ENST00000319533 UBL4AP11441 157 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms