RNA–Protein interactions for RNA: ENST00000315544.6

CNOT4-201, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 1 (best) BASIC

Gene CNOT4, Length 3,783 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-201ENST00000315544 TBC1D29Q9UFV1 150 aa7.15□□□□□ -1.26
CNOT4-201ENST00000315544 COLEC10Q9Y6Z7 277 aa7.15□□□□□ -1.26
CNOT4-201ENST00000315544 CHD3Q12873 2000 aaKnown RBP7.15□□□□□ -1.26
CNOT4-201ENST00000315544 ANKRD20A5PA0PJZ0 165 aa7.15□□□□□ -1.26
CNOT4-201ENST00000315544 EVPLLA8MZ36 301 aa7.15□□□□□ -1.26
CNOT4-201ENST00000315544 HRKO00198 91 aa7.15□□□□□ -1.26
CNOT4-201ENST00000315544 ARPC3O15145 178 aa7.15□□□□□ -1.26
CNOT4-201ENST00000315544 NME6O75414 186 aaPredicted RBP7.15□□□□□ -1.26
CNOT4-201ENST00000315544 CXCL2P19875 107 aa7.15□□□□□ -1.26
CNOT4-201ENST00000315544 RAB28P51157 221 aa7.15□□□□□ -1.26
CNOT4-201ENST00000315544 PPP3R1P63098 170 aa7.15□□□□□ -1.26
CNOT4-201ENST00000315544 CPEB4Q17RY0 729 aaKnown RBP eCLIP7.15□□□□□ -1.26
CNOT4-201ENST00000315544 ZCCHC12Q6PEW1 402 aa7.15□□□□□ -1.26
CNOT4-201ENST00000315544 NUDT18Q6ZVK8 323 aa7.15□□□□□ -1.26
CNOT4-201ENST00000315544 PRSS45Q7RTY3 260 aa7.15□□□□□ -1.26
CNOT4-201ENST00000315544 SPRYD4Q8WW59 207 aaPredicted RBP7.15□□□□□ -1.26
CNOT4-201ENST00000315544 RASSF5Q8WWW0 418 aa7.15□□□□□ -1.26
CNOT4-201ENST00000315544 GATAD2BQ8WXI9 593 aa7.15□□□□□ -1.26
CNOT4-201ENST00000315544 HTRA1Q92743 480 aa7.15□□□□□ -1.26
CNOT4-201ENST00000315544 ABTB1Q969K4 478 aaPredicted RBP7.15□□□□□ -1.26
CNOT4-201ENST00000315544 ATP13A2Q9NQ11 1180 aa7.15□□□□□ -1.26
CNOT4-201ENST00000315544 CSMD1Q96PZ7 3565 aa7.15□□□□□ -1.27
CNOT4-201ENST00000315544 SNPHO15079 494 aa7.15□□□□□ -1.27
CNOT4-201ENST00000315544 CTNSO60931 367 aa7.15□□□□□ -1.27
CNOT4-201ENST00000315544 SELENOPP49908 381 aa7.15□□□□□ -1.27
CNOT4-201ENST00000315544 ZNF84P51523 738 aa7.15□□□□□ -1.27
CNOT4-201ENST00000315544 DYRK1AQ13627 763 aa7.15□□□□□ -1.27
CNOT4-201ENST00000315544 KIAA1324Q6UXG2 1013 aaKnown RBP7.15□□□□□ -1.27
CNOT4-201ENST00000315544 MEPCEQ7L2J0 689 aaKnown RBP7.15□□□□□ -1.27
CNOT4-201ENST00000315544 MEX3DQ86XN8 651 aaKnown RBP7.15□□□□□ -1.27
CNOT4-201ENST00000315544 GATAD2AQ86YP4 633 aa7.15□□□□□ -1.27
CNOT4-201ENST00000315544 SFTPA2Q8IWL1 248 aa7.15□□□□□ -1.27
CNOT4-201ENST00000315544 CFAP206Q8IYR0 622 aa7.15□□□□□ -1.27
CNOT4-201ENST00000315544 CA13Q8N1Q1 262 aa7.15□□□□□ -1.27
CNOT4-201ENST00000315544 SPICQ8N5J4 248 aa7.15□□□□□ -1.27
CNOT4-201ENST00000315544 SMIM19Q96E16 107 aa7.15□□□□□ -1.27
CNOT4-201ENST00000315544 OSGEPL1Q9H4B0 414 aa7.15□□□□□ -1.27
CNOT4-201ENST00000315544 EMC7Q9NPA0 242 aa7.15□□□□□ -1.27
CNOT4-201ENST00000315544 ANGPT4Q9Y264 503 aa7.15□□□□□ -1.27
CNOT4-201ENST00000315544 MID1O15344 667 aa7.14□□□□□ -1.27
CNOT4-201ENST00000315544 ADH1CP00326 375 aa7.14□□□□□ -1.27
CNOT4-201ENST00000315544 SBK2P0C263 348 aa7.14□□□□□ -1.27
CNOT4-201ENST00000315544 GNSP15586 552 aa7.14□□□□□ -1.27
CNOT4-201ENST00000315544 HNRNPA0Q13151 305 aaKnown RBP7.14□□□□□ -1.27
CNOT4-201ENST00000315544 ZNF613Q6PF04 617 aa7.14□□□□□ -1.27
CNOT4-201ENST00000315544 TPRA1Q86W33 373 aa7.14□□□□□ -1.27
CNOT4-201ENST00000315544 HEATR4Q86WZ0 1026 aa7.14□□□□□ -1.27
CNOT4-201ENST00000315544 GPR135Q8IZ08 494 aa7.14□□□□□ -1.27
CNOT4-201ENST00000315544 ATG16L2Q8NAA4 619 aa7.14□□□□□ -1.27
CNOT4-201ENST00000315544 GPR156Q8NFN8 814 aa7.14□□□□□ -1.27
CNOT4-201ENST00000315544 SMIM4Q8WVI0 70 aa7.14□□□□□ -1.27
CNOT4-201ENST00000315544 CDS1Q92903 461 aa7.14□□□□□ -1.27
CNOT4-201ENST00000315544 SLC41A3Q96GZ6 507 aa7.14□□□□□ -1.27
CNOT4-201ENST00000315544 YPEL4Q96NS1 127 aa7.14□□□□□ -1.27
CNOT4-201ENST00000315544 IL4I1Q96RQ9 567 aa7.14□□□□□ -1.27
CNOT4-201ENST00000315544 EGFL8Q99944 293 aa7.14□□□□□ -1.27
CNOT4-201ENST00000315544 CNIH4Q9P003 139 aa7.14□□□□□ -1.27
CNOT4-201ENST00000315544 NUFIP1Q9UHK0 495 aaKnown RBP7.14□□□□□ -1.27
CNOT4-201ENST00000315544 GMEB2Q9UKD1 530 aa7.14□□□□□ -1.27
CNOT4-201ENST00000315544 DMXL2Q8TDJ6 3036 aa7.14□□□□□ -1.27
CNOT4-201ENST00000315544 GOLGA8CPA6NN73 597 aa7.14□□□□□ -1.27
CNOT4-201ENST00000315544 DCTN6O00399 190 aa7.14□□□□□ -1.27
CNOT4-201ENST00000315544 CATP04040 527 aaKnown RBP7.14□□□□□ -1.27
CNOT4-201ENST00000315544 CHRM5P08912 532 aaPredicted RBP7.14□□□□□ -1.27
CNOT4-201ENST00000315544 GSTM3P21266 225 aa7.14□□□□□ -1.27
CNOT4-201ENST00000315544 RORAP35398 523 aa7.14□□□□□ -1.27
CNOT4-201ENST00000315544 CCR8P51685 355 aa7.14□□□□□ -1.27
CNOT4-201ENST00000315544 ZNF133P52736 654 aaPredicted RBP7.14□□□□□ -1.27
CNOT4-201ENST00000315544 ARPP19P56211 112 aa7.14□□□□□ -1.27
CNOT4-201ENST00000315544 SCAND1P57086 179 aa7.14□□□□□ -1.27
CNOT4-201ENST00000315544 SKP2Q13309 424 aa7.14□□□□□ -1.27
CNOT4-201ENST00000315544 UAP1L1Q3KQV9 507 aa7.14□□□□□ -1.27
CNOT4-201ENST00000315544 TRMT12Q53H54 448 aaKnown RBP7.14□□□□□ -1.27
CNOT4-201ENST00000315544 ATG4DQ86TL0 474 aaPredicted RBP7.14□□□□□ -1.27
CNOT4-201ENST00000315544 HORMAD1Q86X24 394 aa7.14□□□□□ -1.27
CNOT4-201ENST00000315544 LRRC28Q86X40 367 aaPredicted RBP7.14□□□□□ -1.27
CNOT4-201ENST00000315544 SLITRK4Q8IW52 837 aa7.14□□□□□ -1.27
CNOT4-201ENST00000315544 OR9A2Q8NGT5 310 aa7.14□□□□□ -1.27
CNOT4-201ENST00000315544 ORAI1Q96D31 301 aa7.14□□□□□ -1.27
CNOT4-201ENST00000315544 HDHD5Q9BXW7 423 aa7.14□□□□□ -1.27
CNOT4-201ENST00000315544 ACTRT3Q9BYD9 372 aa7.14□□□□□ -1.27
CNOT4-201ENST00000315544 CA10Q9NS85 328 aa7.14□□□□□ -1.27
CNOT4-201ENST00000315544 SIDT1Q9NXL6 827 aaKnown RBP7.14□□□□□ -1.27
CNOT4-201ENST00000315544 WSB2Q9NYS7 404 aaPredicted RBP7.14□□□□□ -1.27
CNOT4-201ENST00000315544 TAC3Q9UHF0 121 aa7.14□□□□□ -1.27
CNOT4-201ENST00000315544 SPAG17Q6Q759 2223 aa7.14□□□□□ -1.27
CNOT4-201ENST00000315544 RALGAPA1Q6GYQ0 2036 aa7.14□□□□□ -1.27
CNOT4-201ENST00000315544 FTCDNL1E5RQL4 147 aa7.14□□□□□ -1.27
CNOT4-201ENST00000315544 GMDSO60547 372 aa7.14□□□□□ -1.27
CNOT4-201ENST00000315544 ZNF217O75362 1048 aa7.14□□□□□ -1.27
CNOT4-201ENST00000315544 S100BP04271 92 aaPredicted RBP7.14□□□□□ -1.27
CNOT4-201ENST00000315544 CERS1P27544 350 aa7.14□□□□□ -1.27
CNOT4-201ENST00000315544 MC3RP41968 323 aa7.14□□□□□ -1.27
CNOT4-201ENST00000315544 SERPINB10P48595 397 aa7.14□□□□□ -1.27
CNOT4-201ENST00000315544 SEPHS1P49903 392 aa7.14□□□□□ -1.27
CNOT4-201ENST00000315544 DGKEP52429 567 aa7.14□□□□□ -1.27
CNOT4-201ENST00000315544 H2BFSP57053 126 aa7.14□□□□□ -1.27
CNOT4-201ENST00000315544 PUDPQ08623 228 aa7.14□□□□□ -1.27
CNOT4-201ENST00000315544 HIST3H3Q16695 136 aa7.14□□□□□ -1.27
CNOT4-201ENST00000315544 PWWP2BQ6NUJ5 590 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms