RNA–Protein interactions for RNA: ENST00000308521.9

APOBEC3F-201, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOBEC3F, Length 2,694 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-201ENST00000308521 RAB8AP61006 207 aa9.57□□□□□ -0.88
APOBEC3F-201ENST00000308521 PPP1CAP62136 330 aa9.57□□□□□ -0.88
APOBEC3F-201ENST00000308521 REEP5Q00765 189 aa9.57□□□□□ -0.88
APOBEC3F-201ENST00000308521 EXOSC2Q13868 293 aaKnown RBP9.57□□□□□ -0.88
APOBEC3F-201ENST00000308521 GPR176Q14439 515 aa9.57□□□□□ -0.88
APOBEC3F-201ENST00000308521 MLC1Q15049 377 aa9.57□□□□□ -0.88
APOBEC3F-201ENST00000308521 SPDYE7PQ495Y7 208 aa9.57□□□□□ -0.88
APOBEC3F-201ENST00000308521 KLHL36Q8N4N3 616 aa9.57□□□□□ -0.88
APOBEC3F-201ENST00000308521 EIF4E3Q8N5X7 224 aaKnown RBP9.57□□□□□ -0.88
APOBEC3F-201ENST00000308521 BBS10Q8TAM1 723 aa9.57□□□□□ -0.88
APOBEC3F-201ENST00000308521 NR4A3Q92570 626 aa9.57□□□□□ -0.88
APOBEC3F-201ENST00000308521 RFKQ969G6 155 aa9.57□□□□□ -0.88
APOBEC3F-201ENST00000308521 HSPA12BQ96MM6 686 aa9.57□□□□□ -0.88
APOBEC3F-201ENST00000308521 GFM1Q96RP9 751 aaKnown RBP9.57□□□□□ -0.88
APOBEC3F-201ENST00000308521 NPAS1Q99742 590 aa9.57□□□□□ -0.88
APOBEC3F-201ENST00000308521 MS4A8Q9BY19 250 aa9.57□□□□□ -0.88
APOBEC3F-201ENST00000308521 PELI2Q9HAT8 420 aa9.57□□□□□ -0.88
APOBEC3F-201ENST00000308521 BCL2L10Q9HD36 194 aa9.57□□□□□ -0.88
APOBEC3F-201ENST00000308521 SHISA3A0PJX4 238 aa9.57□□□□□ -0.88
APOBEC3F-201ENST00000308521 PRAMEF27A3QJZ7 478 aa9.57□□□□□ -0.88
APOBEC3F-201ENST00000308521 GLOD5A6NK44 160 aa9.57□□□□□ -0.88
APOBEC3F-201ENST00000308521 M0R3H8 397 aa9.57□□□□□ -0.88
APOBEC3F-201ENST00000308521 FABP7O15540 132 aa9.57□□□□□ -0.88
APOBEC3F-201ENST00000308521 NDUFS4O43181 175 aa9.57□□□□□ -0.88
APOBEC3F-201ENST00000308521 SDC3O75056 442 aa9.57□□□□□ -0.88
APOBEC3F-201ENST00000308521 TSC22D2O75157 780 aa9.57□□□□□ -0.88
APOBEC3F-201ENST00000308521 ZNF217O75362 1048 aa9.57□□□□□ -0.88
APOBEC3F-201ENST00000308521 LALBAP00709 142 aa9.57□□□□□ -0.88
APOBEC3F-201ENST00000308521 IFNA4P05014 189 aa9.57□□□□□ -0.88
APOBEC3F-201ENST00000308521 ACSM4P0C7M7 580 aa9.57□□□□□ -0.88
APOBEC3F-201ENST00000308521 IFNGR2P38484 337 aa9.57□□□□□ -0.88
APOBEC3F-201ENST00000308521 RFX3P48380 749 aa9.57□□□□□ -0.88
APOBEC3F-201ENST00000308521 EPHA4P54764 986 aa9.57□□□□□ -0.88
APOBEC3F-201ENST00000308521 CTBP2P56545 445 aa9.57□□□□□ -0.88
APOBEC3F-201ENST00000308521 RASSF6Q6ZTQ3 369 aa9.57□□□□□ -0.88
APOBEC3F-201ENST00000308521 UBE3DQ7Z6J8 389 aa9.57□□□□□ -0.88
APOBEC3F-201ENST00000308521 LRRC17Q8N6Y2 441 aa9.57□□□□□ -0.88
APOBEC3F-201ENST00000308521 SLC37A2Q8TED4 501 aa9.57□□□□□ -0.88
APOBEC3F-201ENST00000308521 WBP1Q96G27 269 aa9.57□□□□□ -0.88
APOBEC3F-201ENST00000308521 SHDQ96IW2 340 aa9.57□□□□□ -0.88
APOBEC3F-201ENST00000308521 ZNF649Q9BS31 505 aa9.57□□□□□ -0.88
APOBEC3F-201ENST00000308521 PLA2G12AQ9BZM1 189 aa9.57□□□□□ -0.88
APOBEC3F-201ENST00000308521 MED28Q9H204 178 aa9.57□□□□□ -0.88
APOBEC3F-201ENST00000308521 RHBGQ9H310 441 aa9.57□□□□□ -0.88
APOBEC3F-201ENST00000308521 SAV1Q9H4B6 383 aaPredicted RBP9.57□□□□□ -0.88
APOBEC3F-201ENST00000308521 GAREM1Q9H706 876 aa9.57□□□□□ -0.88
APOBEC3F-201ENST00000308521 LHX9Q9NQ69 397 aa9.57□□□□□ -0.88
APOBEC3F-201ENST00000308521 CYSLTR2Q9NS75 346 aa9.57□□□□□ -0.88
APOBEC3F-201ENST00000308521 ACSS1Q9NUB1 689 aaPredicted RBP9.57□□□□□ -0.88
APOBEC3F-201ENST00000308521 NDRG3Q9UGV2 375 aa9.57□□□□□ -0.88
APOBEC3F-201ENST00000308521 TINAGQ9UJW2 476 aa9.57□□□□□ -0.88
APOBEC3F-201ENST00000308521 A0A1W2PPL8 197 aa9.56□□□□□ -0.88
APOBEC3F-201ENST00000308521 A8MXK9 166 aa9.56□□□□□ -0.88
APOBEC3F-201ENST00000308521 C10orf142B7Z368 130 aa9.56□□□□□ -0.88
APOBEC3F-201ENST00000308521 ST8SIA5O15466 376 aa9.56□□□□□ -0.88
APOBEC3F-201ENST00000308521 SIGLEC6O43699 453 aa9.56□□□□□ -0.88
APOBEC3F-201ENST00000308521 TMPRSS11DO60235 418 aa9.56□□□□□ -0.88
APOBEC3F-201ENST00000308521 NCR1O76036 304 aa9.56□□□□□ -0.88
APOBEC3F-201ENST00000308521 DHFRP00374 187 aa9.56□□□□□ -0.88
APOBEC3F-201ENST00000308521 IGHA1P01876 353 aa9.56□□□□□ -0.88
APOBEC3F-201ENST00000308521 ELK1P19419 428 aa9.56□□□□□ -0.88
APOBEC3F-201ENST00000308521 SOX18P35713 384 aa9.56□□□□□ -0.88
APOBEC3F-201ENST00000308521 CD79BP40259 229 aa9.56□□□□□ -0.88
APOBEC3F-201ENST00000308521 MTNR1BP49286 362 aa9.56□□□□□ -0.88
APOBEC3F-201ENST00000308521 CSNK1EP49674 416 aaKnown RBP9.56□□□□□ -0.88
APOBEC3F-201ENST00000308521 BDH1Q02338 343 aa9.56□□□□□ -0.88
APOBEC3F-201ENST00000308521 TSPAN31Q12999 210 aa9.56□□□□□ -0.88
APOBEC3F-201ENST00000308521 SYPL1Q16563 259 aa9.56□□□□□ -0.88
APOBEC3F-201ENST00000308521 RTL4Q6ZR62 310 aa9.56□□□□□ -0.88
APOBEC3F-201ENST00000308521 KRT74Q7RTS7 529 aa9.56□□□□□ -0.88
APOBEC3F-201ENST00000308521 COMTD1Q86VU5 262 aa9.56□□□□□ -0.88
APOBEC3F-201ENST00000308521 SHISA5Q8N114 240 aa9.56□□□□□ -0.88
APOBEC3F-201ENST00000308521 OR5M3Q8NGP4 307 aa9.56□□□□□ -0.88
APOBEC3F-201ENST00000308521 GPBAR1Q8TDU6 330 aa9.56□□□□□ -0.88
APOBEC3F-201ENST00000308521 RIT1Q92963 219 aa9.56□□□□□ -0.88
APOBEC3F-201ENST00000308521 KCTD12Q96CX2 325 aaKnown RBP9.56□□□□□ -0.88
APOBEC3F-201ENST00000308521 SCMH1Q96GD3 660 aa9.56□□□□□ -0.88
APOBEC3F-201ENST00000308521 BBS4Q96RK4 519 aa9.56□□□□□ -0.88
APOBEC3F-201ENST00000308521 SEC22CQ9BRL7 303 aa9.56□□□□□ -0.88
APOBEC3F-201ENST00000308521 REG4Q9BYZ8 158 aa9.56□□□□□ -0.88
APOBEC3F-201ENST00000308521 UCK1Q9HA47 277 aa9.56□□□□□ -0.88
APOBEC3F-201ENST00000308521 MED17Q9NVC6 651 aa9.56□□□□□ -0.88
APOBEC3F-201ENST00000308521 TEX10Q9NXF1 929 aaPredicted RBP9.56□□□□□ -0.88
APOBEC3F-201ENST00000308521 PPP1R14DQ9NXH3 145 aa9.56□□□□□ -0.88
APOBEC3F-201ENST00000308521 APOBEC3BQ9UH17 382 aaKnown RBP9.56□□□□□ -0.88
APOBEC3F-201ENST00000308521 MGAT4AQ9UM21 535 aa9.56□□□□□ -0.88
APOBEC3F-201ENST00000308521 HEBP2Q9Y5Z4 205 aa9.56□□□□□ -0.88
APOBEC3F-201ENST00000308521 A0A1B0GVI7 797 aa9.56□□□□□ -0.88
APOBEC3F-201ENST00000308521 LRIT2A6NDA9 550 aa9.56□□□□□ -0.88
APOBEC3F-201ENST00000308521 METTL12A8MUP2 240 aa9.56□□□□□ -0.88
APOBEC3F-201ENST00000308521 PPP2R1BP30154 601 aa9.56□□□□□ -0.88
APOBEC3F-201ENST00000308521 BSGP35613 385 aa9.56□□□□□ -0.88
APOBEC3F-201ENST00000308521 FCN2Q15485 313 aa9.56□□□□□ -0.88
APOBEC3F-201ENST00000308521 AADACL4Q5VUY2 407 aa9.56□□□□□ -0.88
APOBEC3F-201ENST00000308521 LHFPL3Q86UP9 236 aa9.56□□□□□ -0.88
APOBEC3F-201ENST00000308521 LRRC28Q86X40 367 aaPredicted RBP9.56□□□□□ -0.88
APOBEC3F-201ENST00000308521 ZFP41Q8N8Y5 198 aa9.56□□□□□ -0.88
APOBEC3F-201ENST00000308521 RFT1Q96AA3 541 aa9.56□□□□□ -0.88
APOBEC3F-201ENST00000308521 PHF21AQ96BD5 680 aa9.56□□□□□ -0.88
APOBEC3F-201ENST00000308521 LRRC61Q9BV99 259 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms