RNA–Protein interactions for RNA: ENST00000303406.4

HOXC4-201, Transcript of homeobox C4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC4, Length 1,524 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-201ENST00000303406 BDH1Q02338 343 aa17.81■□□□□ 0.44
HOXC4-201ENST00000303406 C11orf91Q3C1V1 193 aa17.81■□□□□ 0.44
HOXC4-201ENST00000303406 C1orf189Q5VU69 101 aa17.81■□□□□ 0.44
HOXC4-201ENST00000303406 PLBD1Q6P4A8 553 aa17.81■□□□□ 0.44
HOXC4-201ENST00000303406 SLC29A4Q7RTT9 530 aa17.81■□□□□ 0.44
HOXC4-201ENST00000303406 TMPRSS9Q7Z410 1059 aa17.81■□□□□ 0.44
HOXC4-201ENST00000303406 C9orf40Q8IXQ3 194 aa17.81■□□□□ 0.44
HOXC4-201ENST00000303406 BBS1Q8NFJ9 593 aa17.81■□□□□ 0.44
HOXC4-201ENST00000303406 MAFAQ8NHW3 353 aaPredicted RBP17.81■□□□□ 0.44
HOXC4-201ENST00000303406 TNFRSF13CQ96RJ3 184 aa17.81■□□□□ 0.44
HOXC4-201ENST00000303406 LMF1Q96S06 567 aa17.81■□□□□ 0.44
HOXC4-201ENST00000303406 WWTR1Q9GZV5 400 aa17.81■□□□□ 0.44
HOXC4-201ENST00000303406 ENKD1Q9H0I2 346 aa17.81■□□□□ 0.44
HOXC4-201ENST00000303406 ERVK13-1Q9NX77 482 aa17.81■□□□□ 0.44
HOXC4-201ENST00000303406 HAO2Q9NYQ3 351 aa17.81■□□□□ 0.44
HOXC4-201ENST00000303406 KLHL21Q9UJP4 597 aa17.81■□□□□ 0.44
HOXC4-201ENST00000303406 MKL2Q9ULH7 1088 aa17.81■□□□□ 0.44
HOXC4-201ENST00000303406 ATXN7L1Q9ULK2 861 aaPredicted RBP17.81■□□□□ 0.44
HOXC4-201ENST00000303406 PEX16Q9Y5Y5 336 aa17.81■□□□□ 0.44
HOXC4-201ENST00000303406 TRAV27A0A087WT01 109 aa17.8■□□□□ 0.44
HOXC4-201ENST00000303406 CPED1A4D0V7 1026 aa17.8■□□□□ 0.44
HOXC4-201ENST00000303406 GAAP10253 952 aa17.8■□□□□ 0.44
HOXC4-201ENST00000303406 CD40LGP29965 261 aa17.8■□□□□ 0.44
HOXC4-201ENST00000303406 PNLIPRP2P54317 469 aa17.8■□□□□ 0.44
HOXC4-201ENST00000303406 CD226Q15762 336 aa17.8■□□□□ 0.44
HOXC4-201ENST00000303406 INAQ16352 499 aa17.8■□□□□ 0.44
HOXC4-201ENST00000303406 SOWAHCQ53LP3 525 aaPredicted RBP17.8■□□□□ 0.44
HOXC4-201ENST00000303406 ATG4DQ86TL0 474 aaPredicted RBP17.8■□□□□ 0.44
HOXC4-201ENST00000303406 CEP76Q8TAP6 659 aa17.8■□□□□ 0.44
HOXC4-201ENST00000303406 PHOSPHO1Q8TCT1 267 aa17.8■□□□□ 0.44
HOXC4-201ENST00000303406 PIGKQ92643 395 aa17.8■□□□□ 0.44
HOXC4-201ENST00000303406 CLIP3Q96DZ5 547 aa17.8■□□□□ 0.44
HOXC4-201ENST00000303406 COQ7Q99807 217 aa17.8■□□□□ 0.44
HOXC4-201ENST00000303406 SLC7A5P2Q9GIP4 190 aa17.8■□□□□ 0.44
HOXC4-201ENST00000303406 RNF167Q9H6Y7 350 aa17.8■□□□□ 0.44
HOXC4-201ENST00000303406 SLC22A11Q9NSA0 550 aa17.8■□□□□ 0.44
HOXC4-201ENST00000303406 CAB39Q9Y376 341 aaPredicted RBP17.8■□□□□ 0.44
HOXC4-201ENST00000303406 ZNF337Q9Y3M9 751 aa17.8■□□□□ 0.44
HOXC4-201ENST00000303406 SPIN1Q9Y657 262 aaPredicted RBP17.8■□□□□ 0.44
HOXC4-201ENST00000303406 ARID1BQ8NFD5 2236 aaPredicted RBP17.8■□□□□ 0.44
HOXC4-201ENST00000303406 IGHV5-10-1A0A0J9YXX1 117 aa17.79■□□□□ 0.44
HOXC4-201ENST00000303406 AKAP8O43823 692 aaKnown RBP17.79■□□□□ 0.44
HOXC4-201ENST00000303406 EIF4E2O60573 245 aaKnown RBP17.79■□□□□ 0.44
HOXC4-201ENST00000303406 OR7A10O76100 309 aa17.79■□□□□ 0.44
HOXC4-201ENST00000303406 PDGFBP01127 241 aaPredicted RBP17.79■□□□□ 0.44
HOXC4-201ENST00000303406 CYC1P08574 325 aa17.79■□□□□ 0.44
HOXC4-201ENST00000303406 IL12BP29460 328 aa17.79■□□□□ 0.44
HOXC4-201ENST00000303406 CAPZA2P47755 286 aa17.79■□□□□ 0.44
HOXC4-201ENST00000303406 RPS3AP61247 264 aaKnown RBP17.79■□□□□ 0.44
HOXC4-201ENST00000303406 ITGADQ13349 1161 aa17.79■□□□□ 0.44
HOXC4-201ENST00000303406 NDUFAF6Q330K2 333 aa17.79■□□□□ 0.44
HOXC4-201ENST00000303406 ZNF362Q5T0B9 420 aaPredicted RBP17.79■□□□□ 0.44
HOXC4-201ENST00000303406 LIPKQ5VXJ0 399 aa17.79■□□□□ 0.44
HOXC4-201ENST00000303406 DPY19L2P2Q6ZN68 376 aa17.79■□□□□ 0.44
HOXC4-201ENST00000303406 BPHLQ86WA6 291 aaPredicted RBP17.79■□□□□ 0.44
HOXC4-201ENST00000303406 SLC37A3Q8NCC5 494 aa17.79■□□□□ 0.44
HOXC4-201ENST00000303406 OR4F15Q8NGB8 312 aa17.79■□□□□ 0.44
HOXC4-201ENST00000303406 OR51A7Q8NH64 312 aa17.79■□□□□ 0.44
HOXC4-201ENST00000303406 TM9SF4Q92544 642 aa17.79■□□□□ 0.44
HOXC4-201ENST00000303406 KISS1RQ969F8 398 aaPredicted RBP17.79■□□□□ 0.44
HOXC4-201ENST00000303406 TP53INP1Q96A56 240 aa17.79■□□□□ 0.44
HOXC4-201ENST00000303406 GPX7Q96SL4 187 aaPredicted RBP17.79■□□□□ 0.44
HOXC4-201ENST00000303406 ASPNQ9BXN1 380 aa17.79■□□□□ 0.44
HOXC4-201ENST00000303406 CHRNA9Q9UGM1 479 aa17.79■□□□□ 0.44
HOXC4-201ENST00000303406 RARRES3Q9UL19 164 aa17.79■□□□□ 0.44
HOXC4-201ENST00000303406 SF3B6Q9Y3B4 125 aaKnown RBP17.79■□□□□ 0.44
HOXC4-201ENST00000303406 CCDC182A6NF36 153 aa17.78■□□□□ 0.44
HOXC4-201ENST00000303406 ALG1L2C9J202 215 aa17.78■□□□□ 0.44
HOXC4-201ENST00000303406 GTPBP1O00178 669 aaKnown RBP17.78■□□□□ 0.44
HOXC4-201ENST00000303406 ARPC3O15145 178 aa17.78■□□□□ 0.44
HOXC4-201ENST00000303406 IDH3BO43837 385 aa17.78■□□□□ 0.44
HOXC4-201ENST00000303406 PPP1R3DO95685 299 aa17.78■□□□□ 0.44
HOXC4-201ENST00000303406 SLC2A5P22732 501 aa17.78■□□□□ 0.44
HOXC4-201ENST00000303406 GABRA5P31644 462 aa17.78■□□□□ 0.44
HOXC4-201ENST00000303406 ETV6P41212 452 aa17.78■□□□□ 0.44
HOXC4-201ENST00000303406 RPS4XP62701 263 aaKnown RBP17.78■□□□□ 0.44
HOXC4-201ENST00000303406 CSTF1Q05048 431 aaKnown RBP17.78■□□□□ 0.44
HOXC4-201ENST00000303406 POU4F2Q12837 409 aa17.78■□□□□ 0.44
HOXC4-201ENST00000303406 GPR50Q13585 617 aa17.78■□□□□ 0.44
HOXC4-201ENST00000303406 OR2G6Q5TZ20 316 aa17.78■□□□□ 0.44
HOXC4-201ENST00000303406 CD200R1LQ6Q8B3 271 aa17.78■□□□□ 0.44
HOXC4-201ENST00000303406 MAML2Q8IZL2 1156 aaPredicted RBP17.78■□□□□ 0.44
HOXC4-201ENST00000303406 ACBD7Q8N6N7 88 aa17.78■□□□□ 0.44
HOXC4-201ENST00000303406 STT3BQ8TCJ2 826 aa17.78■□□□□ 0.44
HOXC4-201ENST00000303406 CHPT1Q8WUD6 406 aa17.78■□□□□ 0.44
HOXC4-201ENST00000303406 GAL3ST4Q96RP7 486 aa17.78■□□□□ 0.44
HOXC4-201ENST00000303406 SECISBP2Q96T21 854 aaKnown RBP17.78■□□□□ 0.44
HOXC4-201ENST00000303406 SEMA4CQ9C0C4 833 aa17.78■□□□□ 0.44
HOXC4-201ENST00000303406 GAREM1Q9H706 876 aa17.78■□□□□ 0.44
HOXC4-201ENST00000303406 EXOSC4Q9NPD3 245 aaKnown RBP17.78■□□□□ 0.44
HOXC4-201ENST00000303406 PPIEQ9UNP9 301 aaKnown RBP17.78■□□□□ 0.44
HOXC4-201ENST00000303406 IGKV1D-42A0A075B6H8 117 aa17.77■□□□□ 0.44
HOXC4-201ENST00000303406 FAM183AA6NL82 134 aa17.77■□□□□ 0.44
HOXC4-201ENST00000303406 ELOA3DA6NLF2 546 aaPredicted RBP17.77■□□□□ 0.44
HOXC4-201ENST00000303406 SLC30A4O14863 429 aa17.77■□□□□ 0.44
HOXC4-201ENST00000303406 REM1O75628 298 aa17.77■□□□□ 0.44
HOXC4-201ENST00000303406 SULT1C4O75897 302 aa17.77■□□□□ 0.44
HOXC4-201ENST00000303406 APOL3O95236 402 aa17.77■□□□□ 0.44
HOXC4-201ENST00000303406 GALP22466 123 aa17.77■□□□□ 0.44
HOXC4-201ENST00000303406 FGF9P31371 208 aaPredicted RBP17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms