RNA–Protein interactions for RNA: ENST00000299847.6

CHRFAM7A-201, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRFAM7A, Length 6,220 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-201ENST00000299847 PRAMEF9Q5VWM5 478 aa12.69□□□□□ -0.38
CHRFAM7A-201ENST00000299847 ZNF322Q6U7Q0 402 aaPredicted RBP12.69□□□□□ -0.38
CHRFAM7A-201ENST00000299847 MEPCEQ7L2J0 689 aaKnown RBP12.69□□□□□ -0.38
CHRFAM7A-201ENST00000299847 CCDC71Q8IV32 467 aaPredicted RBP12.69□□□□□ -0.38
CHRFAM7A-201ENST00000299847 OR7G2Q8NG99 324 aa12.69□□□□□ -0.38
CHRFAM7A-201ENST00000299847 TANKQ92844 425 aa12.69□□□□□ -0.38
CHRFAM7A-201ENST00000299847 CHFRQ96EP1 664 aa12.69□□□□□ -0.38
CHRFAM7A-201ENST00000299847 OR14A2Q96R54 314 aa12.69□□□□□ -0.38
CHRFAM7A-201ENST00000299847 INSM2Q96T92 566 aaPredicted RBP12.69□□□□□ -0.38
CHRFAM7A-201ENST00000299847 NOX3Q9HBY0 568 aa12.69□□□□□ -0.38
CHRFAM7A-201ENST00000299847 C1orf196B1AJZ1 125 aa12.69□□□□□ -0.38
CHRFAM7A-201ENST00000299847 IFNA17P01571 189 aa12.69□□□□□ -0.38
CHRFAM7A-201ENST00000299847 HBA1P69905 142 aa12.69□□□□□ -0.38
CHRFAM7A-201ENST00000299847 LTBQ06643 244 aa12.69□□□□□ -0.38
CHRFAM7A-201ENST00000299847 MELKQ14680 651 aa12.69□□□□□ -0.38
CHRFAM7A-201ENST00000299847 METTL11BQ5VVY1 283 aa12.69□□□□□ -0.38
CHRFAM7A-201ENST00000299847 APOOLQ6UXV4 268 aa12.69□□□□□ -0.38
CHRFAM7A-201ENST00000299847 OR5D14Q8NGL3 314 aa12.69□□□□□ -0.38
CHRFAM7A-201ENST00000299847 GGHQ92820 318 aa12.69□□□□□ -0.38
CHRFAM7A-201ENST00000299847 VRK1Q99986 396 aaPredicted RBP12.69□□□□□ -0.38
CHRFAM7A-201ENST00000299847 CXCL16Q9H2A7 254 aa12.69□□□□□ -0.38
CHRFAM7A-201ENST00000299847 ATPIF1Q9UII2 106 aa12.69□□□□□ -0.38
CHRFAM7A-201ENST00000299847 MCTS1Q9ULC4 181 aaKnown RBP12.69□□□□□ -0.38
CHRFAM7A-201ENST00000299847 ATG12O94817 140 aa12.69□□□□□ -0.38
CHRFAM7A-201ENST00000299847 NKX6-1P78426 367 aaPredicted RBP12.69□□□□□ -0.38
CHRFAM7A-201ENST00000299847 COQ5Q5HYK3 327 aa12.69□□□□□ -0.38
CHRFAM7A-201ENST00000299847 FNDC9Q8TBE3 224 aa12.69□□□□□ -0.38
CHRFAM7A-201ENST00000299847 ARRDC3Q96B67 414 aa12.69□□□□□ -0.38
CHRFAM7A-201ENST00000299847 RTP4Q96DX8 246 aa12.69□□□□□ -0.38
CHRFAM7A-201ENST00000299847 CCL26Q9Y258 94 aa12.69□□□□□ -0.38
CHRFAM7A-201ENST00000299847 V9GY05 133 aa12.69□□□□□ -0.38
CHRFAM7A-201ENST00000299847 TMEM269A0A1B0GVZ9 245 aa12.68□□□□□ -0.38
CHRFAM7A-201ENST00000299847 RFXAPO00287 272 aa12.68□□□□□ -0.38
CHRFAM7A-201ENST00000299847 SULT1B1O43704 296 aa12.68□□□□□ -0.38
CHRFAM7A-201ENST00000299847 STK17BO94768 372 aa12.68□□□□□ -0.38
CHRFAM7A-201ENST00000299847 AIFM1O95831 613 aa12.68□□□□□ -0.38
CHRFAM7A-201ENST00000299847 PTTG1O95997 202 aa12.68□□□□□ -0.38
CHRFAM7A-201ENST00000299847 IFNA10P01566 189 aa12.68□□□□□ -0.38
CHRFAM7A-201ENST00000299847 CSF1P09603 554 aa12.68□□□□□ -0.38
CHRFAM7A-201ENST00000299847 CHATP28329 748 aa12.68□□□□□ -0.38
CHRFAM7A-201ENST00000299847 VEGFCP49767 419 aa12.68□□□□□ -0.38
CHRFAM7A-201ENST00000299847 CLDN6P56747 220 aa12.68□□□□□ -0.38
CHRFAM7A-201ENST00000299847 SLC14A1Q13336 389 aa12.68□□□□□ -0.38
CHRFAM7A-201ENST00000299847 CAMK2DQ13557 499 aa12.68□□□□□ -0.38
CHRFAM7A-201ENST00000299847 MRPL2Q5T653 305 aaKnown RBP12.68□□□□□ -0.38
CHRFAM7A-201ENST00000299847 ZNF585AQ6P3V2 769 aa12.68□□□□□ -0.38
CHRFAM7A-201ENST00000299847 OR5M1Q8NGP8 315 aa12.68□□□□□ -0.38
CHRFAM7A-201ENST00000299847 TBC1D20Q96BZ9 403 aa12.68□□□□□ -0.38
CHRFAM7A-201ENST00000299847 RSPRY1Q96DX4 576 aa12.68□□□□□ -0.38
CHRFAM7A-201ENST00000299847 C1QTNF2Q9BXJ5 285 aa12.68□□□□□ -0.38
CHRFAM7A-201ENST00000299847 MFFQ9GZY8 342 aa12.68□□□□□ -0.38
CHRFAM7A-201ENST00000299847 GPR45Q9Y5Y3 372 aa12.68□□□□□ -0.38
CHRFAM7A-201ENST00000299847 SRPX2O60687 465 aaPredicted RBP12.68□□□□□ -0.38
CHRFAM7A-201ENST00000299847 ILKQ13418 452 aa12.68□□□□□ -0.38
CHRFAM7A-201ENST00000299847 GPR18Q14330 331 aa12.68□□□□□ -0.38
CHRFAM7A-201ENST00000299847 ZNF691Q5VV52 312 aa12.68□□□□□ -0.38
CHRFAM7A-201ENST00000299847 C18orf63Q68DL7 685 aa12.68□□□□□ -0.38
CHRFAM7A-201ENST00000299847 TMEM163Q8TC26 289 aa12.68□□□□□ -0.38
CHRFAM7A-201ENST00000299847 ARL11Q969Q4 196 aa12.68□□□□□ -0.38
CHRFAM7A-201ENST00000299847 ZNF337Q9Y3M9 751 aa12.68□□□□□ -0.38
CHRFAM7A-201ENST00000299847 NWD2Q9ULI1 1742 aa12.68□□□□□ -0.38
CHRFAM7A-201ENST00000299847 SUSD5O60279 629 aa12.68□□□□□ -0.38
CHRFAM7A-201ENST00000299847 M6PRP20645 277 aa12.68□□□□□ -0.38
CHRFAM7A-201ENST00000299847 DRD1P21728 446 aa12.68□□□□□ -0.38
CHRFAM7A-201ENST00000299847 OMGP23515 440 aa12.68□□□□□ -0.38
CHRFAM7A-201ENST00000299847 CLDN17P56750 224 aa12.68□□□□□ -0.38
CHRFAM7A-201ENST00000299847 SSTP61278 116 aa12.68□□□□□ -0.38
CHRFAM7A-201ENST00000299847 MC2RQ01718 297 aa12.68□□□□□ -0.38
CHRFAM7A-201ENST00000299847 SF3A2Q15428 464 aaKnown RBP12.68□□□□□ -0.38
CHRFAM7A-201ENST00000299847 FCRLAQ7L513 359 aa12.68□□□□□ -0.38
CHRFAM7A-201ENST00000299847 NOXA1Q86UR1 476 aa12.68□□□□□ -0.38
CHRFAM7A-201ENST00000299847 HIDE1A8MVS5 230 aa12.68□□□□□ -0.38
CHRFAM7A-201ENST00000299847 SMLR1H3BR10 107 aa12.68□□□□□ -0.38
CHRFAM7A-201ENST00000299847 FBXO24O75426 580 aa12.68□□□□□ -0.38
CHRFAM7A-201ENST00000299847 TDGQ13569 410 aa12.68□□□□□ -0.38
CHRFAM7A-201ENST00000299847 ZNF836Q6ZNA1 936 aa12.68□□□□□ -0.38
CHRFAM7A-201ENST00000299847 SULF2Q8IWU5 870 aa12.68□□□□□ -0.38
CHRFAM7A-201ENST00000299847 PARP16Q8N5Y8 322 aa12.68□□□□□ -0.38
CHRFAM7A-201ENST00000299847 OR2T11Q8NH01 316 aa12.68□□□□□ -0.38
CHRFAM7A-201ENST00000299847 ZBTB8AQ96BR9 441 aa12.68□□□□□ -0.38
CHRFAM7A-201ENST00000299847 ZNF486Q96H40 463 aaPredicted RBP12.68□□□□□ -0.38
CHRFAM7A-201ENST00000299847 PRR14Q9BWN1 585 aa12.68□□□□□ -0.38
CHRFAM7A-201ENST00000299847 AGPAT4Q9NRZ5 378 aa12.68□□□□□ -0.38
CHRFAM7A-201ENST00000299847 COPS3Q9UNS2 423 aa12.68□□□□□ -0.38
CHRFAM7A-201ENST00000299847 ACOD1A6NK06 481 aa12.68□□□□□ -0.38
CHRFAM7A-201ENST00000299847 ZNF705GA8MUZ8 300 aaPredicted RBP12.68□□□□□ -0.38
CHRFAM7A-201ENST00000299847 GM2AP17900 193 aa12.68□□□□□ -0.38
CHRFAM7A-201ENST00000299847 CXADRP78310 365 aa12.68□□□□□ -0.38
CHRFAM7A-201ENST00000299847 PGM2L1Q6PCE3 622 aa12.68□□□□□ -0.38
CHRFAM7A-201ENST00000299847 ZNF417Q8TAU3 575 aa12.68□□□□□ -0.38
CHRFAM7A-201ENST00000299847 GIMAP1Q8WWP7 306 aa12.68□□□□□ -0.38
CHRFAM7A-201ENST00000299847 CLMPQ9H6B4 373 aa12.68□□□□□ -0.38
CHRFAM7A-201ENST00000299847 TREX1Q9NSU2 369 aa12.68□□□□□ -0.38
CHRFAM7A-201ENST00000299847 MYH10P35580 1976 aa12.68□□□□□ -0.38
CHRFAM7A-201ENST00000299847 GABRPO00591 440 aa12.67□□□□□ -0.38
CHRFAM7A-201ENST00000299847 RFPL3O75679 317 aa12.67□□□□□ -0.38
CHRFAM7A-201ENST00000299847 SNAPC5O75971 98 aa12.67□□□□□ -0.38
CHRFAM7A-201ENST00000299847 OR8G3PP0DMU2 310 aa12.67□□□□□ -0.38
CHRFAM7A-201ENST00000299847 FCGR2AP12318 317 aa12.67□□□□□ -0.38
CHRFAM7A-201ENST00000299847 HLA-FP30511 346 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms