RNA–Protein interactions for RNA: ENST00000299633.6

HDGFL3-201, Transcript of HDGF like 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDGFL3, Length 12,733 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-201ENST00000299633 AK3Q9UIJ7 227 aa10.55□□□□□ -0.72
HDGFL3-201ENST00000299633 RPS5P46782 204 aaKnown RBP10.55□□□□□ -0.72
HDGFL3-201ENST00000299633 GLO1Q04760 184 aa10.55□□□□□ -0.72
HDGFL3-201ENST00000299633 RBMS2Q15434 407 aaKnown RBP10.55□□□□□ -0.72
HDGFL3-201ENST00000299633 C6orf120Q7Z4R8 191 aa10.55□□□□□ -0.72
HDGFL3-201ENST00000299633 LDHAL6BQ9BYZ2 381 aaPredicted RBP10.55□□□□□ -0.72
HDGFL3-201ENST00000299633 INTS6Q9UL03 887 aaKnown RBP10.55□□□□□ -0.72
HDGFL3-201ENST00000299633 C4BPAP04003 597 aaKnown RBP10.55□□□□□ -0.72
HDGFL3-201ENST00000299633 F2RL1P55085 397 aa10.55□□□□□ -0.72
HDGFL3-201ENST00000299633 LINGO4Q6UY18 593 aa10.55□□□□□ -0.72
HDGFL3-201ENST00000299633 NKX3-1Q99801 234 aaPredicted RBP10.55□□□□□ -0.72
HDGFL3-201ENST00000299633 Q9N2J8 555 aa10.55□□□□□ -0.72
HDGFL3-201ENST00000299633 AMZ2Q86W34 360 aa10.54□□□□□ -0.72
HDGFL3-201ENST00000299633 BRI3BPQ8WY22 251 aa10.54□□□□□ -0.72
HDGFL3-201ENST00000299633 PRRC1Q96M27 445 aa10.54□□□□□ -0.72
HDGFL3-201ENST00000299633 OR2J1Q9GZK6 312 aa10.54□□□□□ -0.72
HDGFL3-201ENST00000299633 OCEL1Q9H607 264 aa10.54□□□□□ -0.72
HDGFL3-201ENST00000299633 HOXC6P09630 235 aa10.54□□□□□ -0.72
HDGFL3-201ENST00000299633 TYRP14679 529 aa10.54□□□□□ -0.72
HDGFL3-201ENST00000299633 PTP4A2Q12974 167 aa10.54□□□□□ -0.72
HDGFL3-201ENST00000299633 BLOC1S3Q6QNY0 202 aa10.54□□□□□ -0.72
HDGFL3-201ENST00000299633 TMEM234Q8WY98 164 aa10.54□□□□□ -0.72
HDGFL3-201ENST00000299633 ST8SIA4Q92187 359 aa10.54□□□□□ -0.72
HDGFL3-201ENST00000299633 RDH14Q9HBH5 336 aa10.54□□□□□ -0.72
HDGFL3-201ENST00000299633 STBD1O95210 358 aa10.54□□□□□ -0.72
HDGFL3-201ENST00000299633 RPLP1P05386 114 aaKnown RBP10.54□□□□□ -0.72
HDGFL3-201ENST00000299633 RAB1AP62820 205 aa10.54□□□□□ -0.72
HDGFL3-201ENST00000299633 SLBPQ14493 270 aaKnown RBP eCLIP10.54□□□□□ -0.72
HDGFL3-201ENST00000299633 TLE6Q9H808 572 aa10.54□□□□□ -0.72
HDGFL3-201ENST00000299633 A0A0A6YYJ9 748 aa10.54□□□□□ -0.72
HDGFL3-201ENST00000299633 XKRY2A2RUG3 117 aa10.54□□□□□ -0.72
HDGFL3-201ENST00000299633 DCTN6O00399 190 aa10.54□□□□□ -0.72
HDGFL3-201ENST00000299633 FGF19O95750 216 aa10.54□□□□□ -0.72
HDGFL3-201ENST00000299633 BCL6P41182 706 aa10.54□□□□□ -0.72
HDGFL3-201ENST00000299633 CSKP41240 450 aa10.54□□□□□ -0.72
HDGFL3-201ENST00000299633 AAK1Q2M2I8 961 aa10.54□□□□□ -0.72
HDGFL3-201ENST00000299633 FAM69BQ5VUD6 431 aa10.54□□□□□ -0.72
HDGFL3-201ENST00000299633 REM2Q8IYK8 340 aaPredicted RBP10.54□□□□□ -0.72
HDGFL3-201ENST00000299633 DMBX1Q8NFW5 382 aa10.54□□□□□ -0.72
HDGFL3-201ENST00000299633 PHOSPHO1Q8TCT1 267 aa10.54□□□□□ -0.72
HDGFL3-201ENST00000299633 UNCXA6NJT0 531 aa10.54□□□□□ -0.72
HDGFL3-201ENST00000299633 ANKRD30BLA7E2S9 258 aa10.54□□□□□ -0.72
HDGFL3-201ENST00000299633 PIM1P11309 404 aaPredicted RBP10.54□□□□□ -0.72
HDGFL3-201ENST00000299633 ETV6P41212 452 aa10.54□□□□□ -0.72
HDGFL3-201ENST00000299633 OR1E2P47887 323 aa10.54□□□□□ -0.72
HDGFL3-201ENST00000299633 FIBINQ8TAL6 211 aa10.54□□□□□ -0.72
HDGFL3-201ENST00000299633 TMEM59Q9BXS4 323 aa10.54□□□□□ -0.72
HDGFL3-201ENST00000299633 HRASLSQ9HDD0 168 aa10.54□□□□□ -0.72
HDGFL3-201ENST00000299633 NR2E3Q9Y5X4 410 aa10.54□□□□□ -0.72
HDGFL3-201ENST00000299633 FAM24AA6NFZ4 105 aa10.54□□□□□ -0.72
HDGFL3-201ENST00000299633 ERI3O43414 337 aaKnown RBP10.54□□□□□ -0.72
HDGFL3-201ENST00000299633 SMIM17P0DL12 118 aa10.54□□□□□ -0.72
HDGFL3-201ENST00000299633 RTL6Q6ICC9 239 aa10.54□□□□□ -0.72
HDGFL3-201ENST00000299633 GDPGP1Q6ZNW5 385 aa10.54□□□□□ -0.72
HDGFL3-201ENST00000299633 ADGRG3Q86Y34 549 aa10.54□□□□□ -0.72
HDGFL3-201ENST00000299633 OXSMQ9NWU1 459 aa10.54□□□□□ -0.72
HDGFL3-201ENST00000299633 AJAP1Q9UKB5 411 aaPredicted RBP10.54□□□□□ -0.72
HDGFL3-201ENST00000299633 C1RP00736 705 aa10.54□□□□□ -0.72
HDGFL3-201ENST00000299633 TAP2Q03519 686 aa10.54□□□□□ -0.72
HDGFL3-201ENST00000299633 SLC9A3R2Q15599 337 aa10.54□□□□□ -0.72
HDGFL3-201ENST00000299633 CMPK2Q5EBM0 449 aa10.54□□□□□ -0.72
HDGFL3-201ENST00000299633 MBLAC2Q68D91 279 aa10.54□□□□□ -0.72
HDGFL3-201ENST00000299633 FIBCD1Q8N539 461 aa10.54□□□□□ -0.72
HDGFL3-201ENST00000299633 SPACA1Q9HBV2 294 aa10.54□□□□□ -0.72
HDGFL3-201ENST00000299633 INSIG1O15503 277 aa10.54□□□□□ -0.72
HDGFL3-201ENST00000299633 SYT7O43581 403 aa10.54□□□□□ -0.72
HDGFL3-201ENST00000299633 MMP3P08254 477 aa10.54□□□□□ -0.72
HDGFL3-201ENST00000299633 DDCP20711 480 aa10.54□□□□□ -0.72
HDGFL3-201ENST00000299633 ZNF280AP59817 542 aaPredicted RBP10.54□□□□□ -0.72
HDGFL3-201ENST00000299633 H3F3CQ6NXT2 135 aa10.54□□□□□ -0.72
HDGFL3-201ENST00000299633 OR8J3Q8NGG0 315 aa10.54□□□□□ -0.72
HDGFL3-201ENST00000299633 OR2AG1Q9H205 316 aa10.54□□□□□ -0.72
HDGFL3-201ENST00000299633 CD84Q9UIB8 345 aa10.54□□□□□ -0.72
HDGFL3-201ENST00000299633 PRELID3BQ9Y3B1 194 aa10.54□□□□□ -0.72
HDGFL3-201ENST00000299633 SORDQ00796 357 aa10.54□□□□□ -0.72
HDGFL3-201ENST00000299633 ABHD12BQ7Z5M8 362 aaPredicted RBP10.54□□□□□ -0.72
HDGFL3-201ENST00000299633 SLC35F2Q8IXU6 374 aa10.54□□□□□ -0.72
HDGFL3-201ENST00000299633 TFAP2BQ92481 460 aa10.54□□□□□ -0.72
HDGFL3-201ENST00000299633 CCM2LQ9NUG4 571 aaPredicted RBP10.54□□□□□ -0.72
HDGFL3-201ENST00000299633 PTPRDP23468 1912 aa10.54□□□□□ -0.72
HDGFL3-201ENST00000299633 SLC18A1P54219 525 aa10.54□□□□□ -0.72
HDGFL3-201ENST00000299633 ADARB1P78563 741 aaKnown RBP10.54□□□□□ -0.72
HDGFL3-201ENST00000299633 CYP1B1Q16678 543 aa10.54□□□□□ -0.72
HDGFL3-201ENST00000299633 OR4C12Q96R67 309 aa10.54□□□□□ -0.72
HDGFL3-201ENST00000299633 CTDSP1Q9GZU7 261 aa10.54□□□□□ -0.72
HDGFL3-201ENST00000299633 NXF2Q9GZY0 626 aaKnown RBP10.54□□□□□ -0.72
HDGFL3-201ENST00000299633 OR1A1Q9P1Q5 309 aa10.54□□□□□ -0.72
HDGFL3-201ENST00000299633 CRYM-AS1A6NIL9 109 aa10.53□□□□□ -0.72
HDGFL3-201ENST00000299633 A6NIZ1 184 aa10.53□□□□□ -0.72
HDGFL3-201ENST00000299633 MRPS14O60783 128 aaKnown RBP10.53□□□□□ -0.72
HDGFL3-201ENST00000299633 MPIG6BO95866 241 aa10.53□□□□□ -0.72
HDGFL3-201ENST00000299633 RAP1BP61224 184 aa10.53□□□□□ -0.72
HDGFL3-201ENST00000299633 ABHD15Q6UXT9 468 aa10.53□□□□□ -0.72
HDGFL3-201ENST00000299633 C1orf52Q8N6N3 182 aaKnown RBP10.53□□□□□ -0.72
HDGFL3-201ENST00000299633 SLC25A51Q9H1U9 297 aa10.53□□□□□ -0.72
HDGFL3-201ENST00000299633 AGXTP21549 392 aa10.53□□□□□ -0.72
HDGFL3-201ENST00000299633 HLA-DMAP28067 261 aa10.53□□□□□ -0.72
HDGFL3-201ENST00000299633 ATP6V1FQ16864 119 aa10.53□□□□□ -0.72
HDGFL3-201ENST00000299633 MINDY1Q8N5J2 469 aa10.53□□□□□ -0.72
HDGFL3-201ENST00000299633 ZNF587Q96SQ5 575 aaPredicted RBP10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms