RNA–Protein interactions for RNA: ENST00000296503.9

HMGB2-201, Transcript of high mobility group box 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGB2, Length 1,889 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB2-201ENST00000296503 PIGQQ9BRB3 760 aa10.93□□□□□ -0.66
HMGB2-201ENST00000296503 GPATCH1Q9BRR8 931 aaKnown RBP10.93□□□□□ -0.66
HMGB2-201ENST00000296503 GID8Q9NWU2 228 aa10.93□□□□□ -0.66
HMGB2-201ENST00000296503 LIPT1Q9Y234 373 aa10.93□□□□□ -0.66
HMGB2-201ENST00000296503 RNF6Q9Y252 685 aa10.93□□□□□ -0.66
HMGB2-201ENST00000296503 CARD8Q9Y2G2 431 aa10.93□□□□□ -0.66
HMGB2-201ENST00000296503 ZNF337Q9Y3M9 751 aa10.93□□□□□ -0.66
HMGB2-201ENST00000296503 PCDHB14Q9Y5E9 798 aa10.93□□□□□ -0.66
HMGB2-201ENST00000296503 GPC6Q9Y625 555 aaPredicted RBP10.93□□□□□ -0.66
HMGB2-201ENST00000296503 OR2M5A3KFT3 312 aa10.93□□□□□ -0.66
HMGB2-201ENST00000296503 CYP7B1O75881 506 aa10.93□□□□□ -0.66
HMGB2-201ENST00000296503 EPPINO95925 133 aa10.93□□□□□ -0.66
HMGB2-201ENST00000296503 NR2F1P10589 423 aa10.93□□□□□ -0.66
HMGB2-201ENST00000296503 PEPDP12955 493 aa10.93□□□□□ -0.66
HMGB2-201ENST00000296503 ZNF41P51814 821 aaPredicted RBP10.93□□□□□ -0.66
HMGB2-201ENST00000296503 B3GALT5-AS1P59052 145 aa10.93□□□□□ -0.66
HMGB2-201ENST00000296503 SYPL1Q16563 259 aa10.93□□□□□ -0.66
HMGB2-201ENST00000296503 DDX59Q5T1V6 619 aaKnown RBP eCLIP10.93□□□□□ -0.66
HMGB2-201ENST00000296503 SP5Q6BEB4 398 aaPredicted RBP10.93□□□□□ -0.66
HMGB2-201ENST00000296503 CHMP1BQ7LBR1 199 aa10.93□□□□□ -0.66
HMGB2-201ENST00000296503 CLVS1Q8IUQ0 354 aaPredicted RBP10.93□□□□□ -0.66
HMGB2-201ENST00000296503 UBQLNLQ8IYU4 475 aa10.93□□□□□ -0.66
HMGB2-201ENST00000296503 CENPSQ8N2Z9 138 aa10.93□□□□□ -0.66
HMGB2-201ENST00000296503 RCN3Q96D15 328 aa10.93□□□□□ -0.66
HMGB2-201ENST00000296503 AURKBQ96GD4 344 aaPredicted RBP10.93□□□□□ -0.66
HMGB2-201ENST00000296503 PSD2Q9BQI7 771 aa10.93□□□□□ -0.66
HMGB2-201ENST00000296503 ZNF350Q9GZX5 532 aa10.93□□□□□ -0.66
HMGB2-201ENST00000296503 PAIP1Q9H074 479 aaKnown RBP10.93□□□□□ -0.66
HMGB2-201ENST00000296503 POLE3Q9NRF9 147 aa10.93□□□□□ -0.66
HMGB2-201ENST00000296503 TMEM45AQ9NWC5 275 aa10.93□□□□□ -0.66
HMGB2-201ENST00000296503 ERGIC3Q9Y282 383 aa10.93□□□□□ -0.66
HMGB2-201ENST00000296503 PHF3Q92576 2039 aaKnown RBP10.92□□□□□ -0.66
HMGB2-201ENST00000296503 A0A087WZY1 265 aa10.92□□□□□ -0.66
HMGB2-201ENST00000296503 SERINC4A6NH21 518 aa10.92□□□□□ -0.66
HMGB2-201ENST00000296503 SHISA8B8ZZ34 492 aa10.92□□□□□ -0.66
HMGB2-201ENST00000296503 NPIPB9F8W1W9 429 aa10.92□□□□□ -0.66
HMGB2-201ENST00000296503 H3BML4 177 aa10.92□□□□□ -0.66
HMGB2-201ENST00000296503 LINC01387J3KSC0 135 aa10.92□□□□□ -0.66
HMGB2-201ENST00000296503 CLIC1O00299 241 aa10.92□□□□□ -0.66
HMGB2-201ENST00000296503 KPNA4O00629 521 aaPredicted RBP10.92□□□□□ -0.66
HMGB2-201ENST00000296503 UGT2B17O75795 530 aa10.92□□□□□ -0.66
HMGB2-201ENST00000296503 ETFAP13804 333 aa10.92□□□□□ -0.66
HMGB2-201ENST00000296503 POU3F2P20265 443 aaPredicted RBP10.92□□□□□ -0.66
HMGB2-201ENST00000296503 HTR1EP28566 365 aa10.92□□□□□ -0.66
HMGB2-201ENST00000296503 CHRNB4P30926 498 aa10.92□□□□□ -0.66
HMGB2-201ENST00000296503 LHX2P50458 406 aa10.92□□□□□ -0.66
HMGB2-201ENST00000296503 P2RX1P51575 399 aa10.92□□□□□ -0.66
HMGB2-201ENST00000296503 ZNF117Q03924 483 aa10.92□□□□□ -0.66
HMGB2-201ENST00000296503 CHRNEQ04844 493 aa10.92□□□□□ -0.66
HMGB2-201ENST00000296503 ZNF141Q15928 474 aa10.92□□□□□ -0.66
HMGB2-201ENST00000296503 NDUFA5Q16718 116 aa10.92□□□□□ -0.66
HMGB2-201ENST00000296503 ACSF3Q4G176 576 aaPredicted RBP10.92□□□□□ -0.66
HMGB2-201ENST00000296503 TYW3Q6IPR3 259 aaKnown RBP10.92□□□□□ -0.66
HMGB2-201ENST00000296503 TMEM53Q6P2H8 277 aa10.92□□□□□ -0.66
HMGB2-201ENST00000296503 CBLN3Q6UW01 205 aa10.92□□□□□ -0.66
HMGB2-201ENST00000296503 ZNF619Q8N2I2 560 aa10.92□□□□□ -0.66
HMGB2-201ENST00000296503 TMCO5AQ8N6Q1 288 aa10.92□□□□□ -0.66
HMGB2-201ENST00000296503 ZPLD1Q8TCW7 415 aa10.92□□□□□ -0.66
HMGB2-201ENST00000296503 SMPDL3BQ92485 455 aa10.92□□□□□ -0.66
HMGB2-201ENST00000296503 TRNT1Q96Q11 434 aaKnown RBP10.92□□□□□ -0.66
HMGB2-201ENST00000296503 CD300AQ9UGN4 299 aa10.92□□□□□ -0.66
HMGB2-201ENST00000296503 KCNE5Q9UJ90 142 aa10.92□□□□□ -0.66
HMGB2-201ENST00000296503 ASH1LQ9NR48 2969 aaKnown RBP10.92□□□□□ -0.66
HMGB2-201ENST00000296503 A0A096LPI6 279 aa10.91□□□□□ -0.66
HMGB2-201ENST00000296503 A0A1W2PP18 115 aa10.91□□□□□ -0.66
HMGB2-201ENST00000296503 PRAMEF27A3QJZ7 478 aa10.91□□□□□ -0.66
HMGB2-201ENST00000296503 H3BMQ9 156 aa10.91□□□□□ -0.66
HMGB2-201ENST00000296503 ZNF264O43296 627 aa10.91□□□□□ -0.66
HMGB2-201ENST00000296503 OIP5O43482 229 aa10.91□□□□□ -0.66
HMGB2-201ENST00000296503 EIF4E2O60573 245 aaKnown RBP10.91□□□□□ -0.66
HMGB2-201ENST00000296503 TNFRSF21O75509 655 aa10.91□□□□□ -0.66
HMGB2-201ENST00000296503 CSTAP01040 98 aa10.91□□□□□ -0.66
HMGB2-201ENST00000296503 IL2RAP01589 272 aa10.91□□□□□ -0.66
HMGB2-201ENST00000296503 GUSBP08236 651 aa10.91□□□□□ -0.66
HMGB2-201ENST00000296503 UBL4AP11441 157 aa10.91□□□□□ -0.66
HMGB2-201ENST00000296503 CD1EP15812 388 aa10.91□□□□□ -0.66
HMGB2-201ENST00000296503 CAPN3P20807 821 aa10.91□□□□□ -0.66
HMGB2-201ENST00000296503 CCR4P51679 360 aa10.91□□□□□ -0.66
HMGB2-201ENST00000296503 FUT5Q11128 374 aa10.91□□□□□ -0.66
HMGB2-201ENST00000296503 CDSNQ15517 529 aa10.91□□□□□ -0.66
HMGB2-201ENST00000296503 RGS21Q2M5E4 152 aa10.91□□□□□ -0.66
HMGB2-201ENST00000296503 NDUFAF6Q330K2 333 aa10.91□□□□□ -0.66
HMGB2-201ENST00000296503 PAGE3Q5JUK9 113 aa10.91□□□□□ -0.66
HMGB2-201ENST00000296503 NANOGP8Q6NSW7 305 aa10.91□□□□□ -0.66
HMGB2-201ENST00000296503 C8orf82Q6P1X6 216 aaPredicted RBP10.91□□□□□ -0.66
HMGB2-201ENST00000296503 FRRS1Q6ZNA5 592 aa10.91□□□□□ -0.66
HMGB2-201ENST00000296503 EIF3MQ7L2H7 374 aaKnown RBP10.91□□□□□ -0.66
HMGB2-201ENST00000296503 HMGN2P46Q86SG4 172 aa10.91□□□□□ -0.66
HMGB2-201ENST00000296503 LACC1Q8IV20 430 aa10.91□□□□□ -0.66
HMGB2-201ENST00000296503 MEIOBQ8N635 442 aa10.91□□□□□ -0.66
HMGB2-201ENST00000296503 PCYOX1LQ8NBM8 494 aa10.91□□□□□ -0.66
HMGB2-201ENST00000296503 ZG16BQ96DA0 208 aa10.91□□□□□ -0.66
HMGB2-201ENST00000296503 COG8Q96MW5 612 aa10.91□□□□□ -0.66
HMGB2-201ENST00000296503 SAP130Q9H0E3 1048 aa10.91□□□□□ -0.66
HMGB2-201ENST00000296503 RAD21L1Q9H4I0 556 aa10.91□□□□□ -0.66
HMGB2-201ENST00000296503 MTHFD2LQ9H903 347 aaPredicted RBP10.91□□□□□ -0.66
HMGB2-201ENST00000296503 MED17Q9NVC6 651 aa10.91□□□□□ -0.66
HMGB2-201ENST00000296503 SELENONQ9NZV5 590 aa10.91□□□□□ -0.66
HMGB2-201ENST00000296503 SLAMF8Q9P0V8 285 aa10.91□□□□□ -0.66
HMGB2-201ENST00000296503 NDUFAF1Q9Y375 327 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms