RNA–Protein interactions for RNA: ENST00000296302.11

PBRM1-201, Transcript of polybromo 1, humanhuman

TSL 1 (best) BASIC

Gene PBRM1, Length 5,145 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-201ENST00000296302 LGALS14Q8TCE9 139 aa10.32□□□□□ -0.76
PBRM1-201ENST00000296302 DYNC2LI1Q8TCX1 351 aa10.32□□□□□ -0.76
PBRM1-201ENST00000296302 SLC38A5Q8WUX1 472 aa10.32□□□□□ -0.76
PBRM1-201ENST00000296302 ASB17Q8WXJ9 295 aa10.32□□□□□ -0.76
PBRM1-201ENST00000296302 SLC25A46Q96AG3 418 aa10.32□□□□□ -0.76
PBRM1-201ENST00000296302 AMBRA1Q9C0C7 1298 aa10.32□□□□□ -0.76
PBRM1-201ENST00000296302 QRSL1Q9H0R6 528 aaKnown RBP10.32□□□□□ -0.76
PBRM1-201ENST00000296302 DUSP21Q9H596 190 aa10.32□□□□□ -0.76
PBRM1-201ENST00000296302 TMEM38AQ9H6F2 299 aa10.32□□□□□ -0.76
PBRM1-201ENST00000296302 SLC22A7Q9Y694 548 aa10.32□□□□□ -0.76
PBRM1-201ENST00000296302 MYH1P12882 1939 aa10.32□□□□□ -0.76
PBRM1-201ENST00000296302 MYH4Q9Y623 1939 aa10.32□□□□□ -0.76
PBRM1-201ENST00000296302 TRAV27A0A087WT01 109 aa10.32□□□□□ -0.76
PBRM1-201ENST00000296302 KDM4FA0A1W2PPD8 638 aa10.32□□□□□ -0.76
PBRM1-201ENST00000296302 HTR3BO95264 441 aa10.32□□□□□ -0.76
PBRM1-201ENST00000296302 SHC1P29353 583 aa10.32□□□□□ -0.76
PBRM1-201ENST00000296302 FXYD4P59646 89 aa10.32□□□□□ -0.76
PBRM1-201ENST00000296302 ZC3H14Q6PJT7 736 aaKnown RBP10.32□□□□□ -0.76
PBRM1-201ENST00000296302 CD163Q86VB7 1156 aa10.32□□□□□ -0.76
PBRM1-201ENST00000296302 UEVLDQ8IX04 471 aa10.32□□□□□ -0.76
PBRM1-201ENST00000296302 RNF141Q8WVD5 230 aa10.32□□□□□ -0.76
PBRM1-201ENST00000296302 ZNF566Q969W8 418 aa10.32□□□□□ -0.76
PBRM1-201ENST00000296302 DEFB126Q9BYW3 111 aa10.32□□□□□ -0.76
PBRM1-201ENST00000296302 SLC25A31Q9H0C2 315 aa10.32□□□□□ -0.76
PBRM1-201ENST00000296302 ATXN7L1Q9ULK2 861 aaPredicted RBP10.32□□□□□ -0.76
PBRM1-201ENST00000296302 GPR34Q9UPC5 381 aa10.32□□□□□ -0.76
PBRM1-201ENST00000296302 NPFFR2Q9Y5X5 522 aa10.32□□□□□ -0.76
PBRM1-201ENST00000296302 SMAD6O43541 496 aaKnown RBP10.32□□□□□ -0.76
PBRM1-201ENST00000296302 SULT1B1O43704 296 aa10.32□□□□□ -0.76
PBRM1-201ENST00000296302 HTR1FP30939 366 aa10.32□□□□□ -0.76
PBRM1-201ENST00000296302 SIRPAP78324 504 aa10.32□□□□□ -0.76
PBRM1-201ENST00000296302 DBPQ10586 325 aaPredicted RBP10.32□□□□□ -0.76
PBRM1-201ENST00000296302 BEX5Q5H9J7 111 aa10.32□□□□□ -0.76
PBRM1-201ENST00000296302 DLEU7Q6UYE1 221 aa10.32□□□□□ -0.76
PBRM1-201ENST00000296302 TTLL10Q6ZVT0 673 aa10.32□□□□□ -0.76
PBRM1-201ENST00000296302 OR5T1Q8NG75 326 aa10.32□□□□□ -0.76
PBRM1-201ENST00000296302 PCNPQ8WW12 178 aaKnown RBP10.32□□□□□ -0.76
PBRM1-201ENST00000296302 PEX11GQ96HA9 241 aa10.32□□□□□ -0.76
PBRM1-201ENST00000296302 NIPSNAP1Q9BPW8 284 aa10.32□□□□□ -0.76
PBRM1-201ENST00000296302 NICN1Q9BSH3 213 aa10.32□□□□□ -0.76
PBRM1-201ENST00000296302 SLC19A3Q9BZV2 496 aa10.32□□□□□ -0.76
PBRM1-201ENST00000296302 GABARAPL1Q9H0R8 117 aa10.32□□□□□ -0.76
PBRM1-201ENST00000296302 PLEKHJ1Q9NW61 149 aa10.32□□□□□ -0.76
PBRM1-201ENST00000296302 OR6C6A6NF89 314 aa10.31□□□□□ -0.76
PBRM1-201ENST00000296302 RAD1O60671 282 aa10.31□□□□□ -0.76
PBRM1-201ENST00000296302 CLEC2LP0C7M8 214 aa10.31□□□□□ -0.76
PBRM1-201ENST00000296302 LIPCP11150 499 aa10.31□□□□□ -0.76
PBRM1-201ENST00000296302 ELAVL4P26378 380 aaKnown RBP10.31□□□□□ -0.76
PBRM1-201ENST00000296302 CTHP32929 405 aa10.31□□□□□ -0.76
PBRM1-201ENST00000296302 VEGFCP49767 419 aa10.31□□□□□ -0.76
PBRM1-201ENST00000296302 CCR9P51686 369 aa10.31□□□□□ -0.76
PBRM1-201ENST00000296302 GPLD1P80108 840 aa10.31□□□□□ -0.76
PBRM1-201ENST00000296302 TTC9BQ8N6N2 239 aa10.31□□□□□ -0.76
PBRM1-201ENST00000296302 GHSRQ92847 366 aa10.31□□□□□ -0.76
PBRM1-201ENST00000296302 MBOAT4Q96T53 435 aa10.31□□□□□ -0.76
PBRM1-201ENST00000296302 REV1Q9UBZ9 1251 aa10.31□□□□□ -0.76
PBRM1-201ENST00000296302 NDRG4Q9ULP0 352 aaKnown RBP10.31□□□□□ -0.76
PBRM1-201ENST00000296302 TOR1AO14656 332 aa10.31□□□□□ -0.76
PBRM1-201ENST00000296302 ADAM23O75077 832 aa10.31□□□□□ -0.76
PBRM1-201ENST00000296302 C1orf105O95561 183 aa10.31□□□□□ -0.76
PBRM1-201ENST00000296302 HIST1H1TP22492 207 aaPredicted RBP10.31□□□□□ -0.76
PBRM1-201ENST00000296302 ARL3P36405 182 aa10.31□□□□□ -0.76
PBRM1-201ENST00000296302 RGRP47804 291 aa10.31□□□□□ -0.76
PBRM1-201ENST00000296302 DLX2Q07687 328 aaPredicted RBP10.31□□□□□ -0.76
PBRM1-201ENST00000296302 RAB33AQ14088 237 aa10.31□□□□□ -0.76
PBRM1-201ENST00000296302 SSX2Q16385 188 aa10.31□□□□□ -0.76
PBRM1-201ENST00000296302 IDO2Q6ZQW0 420 aa10.31□□□□□ -0.76
PBRM1-201ENST00000296302 HSD11B1LQ7Z5J1 315 aa10.31□□□□□ -0.76
PBRM1-201ENST00000296302 SLCO4A1Q96BD0 722 aa10.31□□□□□ -0.76
PBRM1-201ENST00000296302 SORCS2Q96PQ0 1159 aa10.31□□□□□ -0.76
PBRM1-201ENST00000296302 OR1F2PQ96R84 312 aa10.31□□□□□ -0.76
PBRM1-201ENST00000296302 FAM212BQ9NTI7 297 aaPredicted RBP10.31□□□□□ -0.76
PBRM1-201ENST00000296302 TMPRSS11EQ9UL52 423 aa10.31□□□□□ -0.76
PBRM1-201ENST00000296302 SLC6A14Q9UN76 642 aa10.31□□□□□ -0.76
PBRM1-201ENST00000296302 ETV7Q9Y603 341 aa10.31□□□□□ -0.76
PBRM1-201ENST00000296302 GFRA2O00451 464 aa10.31□□□□□ -0.76
PBRM1-201ENST00000296302 C5AR1P21730 350 aa10.31□□□□□ -0.76
PBRM1-201ENST00000296302 CX3CR1P49238 355 aa10.31□□□□□ -0.76
PBRM1-201ENST00000296302 ARRB1P49407 418 aaPredicted RBP10.31□□□□□ -0.76
PBRM1-201ENST00000296302 PRLHRP49683 370 aa10.31□□□□□ -0.76
PBRM1-201ENST00000296302 GPR155Q7Z3F1 870 aa10.31□□□□□ -0.76
PBRM1-201ENST00000296302 NANOGP1Q8N7R0 232 aa10.31□□□□□ -0.76
PBRM1-201ENST00000296302 TMEM68Q96MH6 324 aa10.31□□□□□ -0.76
PBRM1-201ENST00000296302 UQCC2Q9BRT2 126 aa10.31□□□□□ -0.76
PBRM1-201ENST00000296302 TUBB1Q9H4B7 451 aa10.31□□□□□ -0.76
PBRM1-201ENST00000296302 KLHL13Q9P2N7 655 aa10.31□□□□□ -0.76
PBRM1-201ENST00000296302 ENTPD2Q9Y5L3 495 aa10.31□□□□□ -0.76
PBRM1-201ENST00000296302 NAV1Q8NEY1 1877 aa10.31□□□□□ -0.76
PBRM1-201ENST00000296302 LTBP3Q9NS15 1303 aa10.31□□□□□ -0.76
PBRM1-201ENST00000296302 TRABD2BA6NFA1 517 aa10.31□□□□□ -0.76
PBRM1-201ENST00000296302 SMLR1H3BR10 107 aa10.31□□□□□ -0.76
PBRM1-201ENST00000296302 SYT5O00445 386 aa10.31□□□□□ -0.76
PBRM1-201ENST00000296302 ZNF195O14628 629 aa10.31□□□□□ -0.76
PBRM1-201ENST00000296302 SYNGR4O95473 234 aa10.31□□□□□ -0.76
PBRM1-201ENST00000296302 IL33O95760 270 aa10.31□□□□□ -0.76
PBRM1-201ENST00000296302 ZNF888P0CJ79 500 aaPredicted RBP10.31□□□□□ -0.76
PBRM1-201ENST00000296302 CLDN6P56747 220 aa10.31□□□□□ -0.76
PBRM1-201ENST00000296302 DUSP6Q16828 381 aa10.31□□□□□ -0.76
PBRM1-201ENST00000296302 CTU2Q2VPK5 515 aaKnown RBP10.31□□□□□ -0.76
PBRM1-201ENST00000296302 SBSNQ6UWP8 590 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms