RNA–Protein interactions for RNA: ENST00000279452.10

CD44-204, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-204ENST00000279452 COX6B1P14854 86 aa5.87□□□□□ -1.47
CD44-204ENST00000279452 AGAP20933 346 aa5.87□□□□□ -1.47
CD44-204ENST00000279452 CTSSP25774 331 aa5.87□□□□□ -1.47
CD44-204ENST00000279452 PSMA4P25789 261 aaKnown RBP5.87□□□□□ -1.47
CD44-204ENST00000279452 GRNP28799 593 aaKnown RBP5.87□□□□□ -1.47
CD44-204ENST00000279452 GTF2E2P29084 291 aaKnown RBP5.87□□□□□ -1.47
CD44-204ENST00000279452 PRDX6P30041 224 aa5.87□□□□□ -1.47
CD44-204ENST00000279452 OPRM1P35372 400 aa5.87□□□□□ -1.47
CD44-204ENST00000279452 TIMP3P35625 211 aa5.87□□□□□ -1.47
CD44-204ENST00000279452 APOBEC1P41238 236 aaKnown RBP5.87□□□□□ -1.47
CD44-204ENST00000279452 SLC1A3P43003 542 aa5.87□□□□□ -1.47
CD44-204ENST00000279452 HTR3AP46098 478 aa5.87□□□□□ -1.47
CD44-204ENST00000279452 KCNJ5P48544 419 aa5.87□□□□□ -1.47
CD44-204ENST00000279452 ZNF136P52737 540 aa5.87□□□□□ -1.47
CD44-204ENST00000279452 CTBP2P56545 445 aa5.87□□□□□ -1.47
CD44-204ENST00000279452 CARD18P57730 90 aa5.87□□□□□ -1.47
CD44-204ENST00000279452 OR2B6P58173 313 aa5.87□□□□□ -1.47
CD44-204ENST00000279452 PSME3P61289 254 aa5.87□□□□□ -1.47
CD44-204ENST00000279452 PLAURQ03405 335 aa5.87□□□□□ -1.47
CD44-204ENST00000279452 LIPEQ05469 1076 aa5.87□□□□□ -1.47
CD44-204ENST00000279452 EPS8Q12929 822 aa5.87□□□□□ -1.47
CD44-204ENST00000279452 FOXD4Q12950 439 aaPredicted RBP5.87□□□□□ -1.47
CD44-204ENST00000279452 CDSNQ15517 529 aa5.87□□□□□ -1.47
CD44-204ENST00000279452 ADRM1Q16186 407 aa5.87□□□□□ -1.47
CD44-204ENST00000279452 TMEM44Q2T9K0 475 aa5.87□□□□□ -1.47
CD44-204ENST00000279452 CTU2Q2VPK5 515 aaKnown RBP5.87□□□□□ -1.47
CD44-204ENST00000279452 ELOA3BQ3SY89 546 aa5.87□□□□□ -1.47
CD44-204ENST00000279452 GLIPR1L2Q4G1C9 344 aa5.87□□□□□ -1.47
CD44-204ENST00000279452 SYT14P1Q58G82 188 aa5.87□□□□□ -1.47
CD44-204ENST00000279452 WBP2NLQ6ICG8 309 aa5.87□□□□□ -1.47
CD44-204ENST00000279452 OR2A2Q6IF42 318 aa5.87□□□□□ -1.47
CD44-204ENST00000279452 DHRS4L2Q6PKH6 230 aa5.87□□□□□ -1.47
CD44-204ENST00000279452 SEM1Q6ZVN7 128 aa5.87□□□□□ -1.47
CD44-204ENST00000279452 NET1Q7Z628 596 aaPredicted RBP5.87□□□□□ -1.47
CD44-204ENST00000279452 PIGWQ7Z7B1 504 aa5.87□□□□□ -1.47
CD44-204ENST00000279452 PATL1Q86TB9 770 aaKnown RBP5.87□□□□□ -1.47
CD44-204ENST00000279452 LUZP2Q86TE4 346 aa5.87□□□□□ -1.47
CD44-204ENST00000279452 LSRQ86X29 649 aaPredicted RBP5.87□□□□□ -1.47
CD44-204ENST00000279452 BHLHE22Q8NFJ8 381 aaPredicted RBP5.87□□□□□ -1.47
CD44-204ENST00000279452 ELOA3Q8NG57 546 aa5.87□□□□□ -1.47
CD44-204ENST00000279452 OR52E4Q8NGH9 312 aa5.87□□□□□ -1.47
CD44-204ENST00000279452 MBD3L2Q8NHZ7 208 aaPredicted RBP5.87□□□□□ -1.47
CD44-204ENST00000279452 BCAS4Q8TDM0 211 aa5.87□□□□□ -1.47
CD44-204ENST00000279452 SLC25A43Q8WUT9 341 aaPredicted RBP5.87□□□□□ -1.47
CD44-204ENST00000279452 ROBO4Q8WZ75 1007 aa5.87□□□□□ -1.47
CD44-204ENST00000279452 PROX1Q92786 737 aa5.87□□□□□ -1.47
CD44-204ENST00000279452 OSTF1Q92882 214 aa5.87□□□□□ -1.47
CD44-204ENST00000279452 WNT2BQ93097 391 aa5.87□□□□□ -1.47
CD44-204ENST00000279452 CPNE4Q96A23 557 aaPredicted RBP5.87□□□□□ -1.47
CD44-204ENST00000279452 DDIT4LQ96D03 193 aa5.87□□□□□ -1.47
CD44-204ENST00000279452 ZHX1-C8orf76Q96EF9 292 aa5.87□□□□□ -1.47
CD44-204ENST00000279452 TPD52L3Q96J77 140 aa5.87□□□□□ -1.47
CD44-204ENST00000279452 PSMG3-AS1Q96PY0 264 aa5.87□□□□□ -1.47
CD44-204ENST00000279452 KCTD14Q9BQ13 255 aaPredicted RBP5.87□□□□□ -1.47
CD44-204ENST00000279452 OR11A1Q9GZK7 315 aa5.87□□□□□ -1.47
CD44-204ENST00000279452 PAQR5Q9NXK6 330 aaPredicted RBP5.87□□□□□ -1.47
CD44-204ENST00000279452 C6orf203Q9P0P8 240 aaPredicted RBP5.87□□□□□ -1.47
CD44-204ENST00000279452 TAGLN3Q9UI15 199 aa5.87□□□□□ -1.47
CD44-204ENST00000279452 ADAM21Q9UKJ8 722 aa5.87□□□□□ -1.47
CD44-204ENST00000279452 TMED7Q9Y3B3 224 aa5.87□□□□□ -1.47
CD44-204ENST00000279452 ZNF175Q9Y473 711 aa5.87□□□□□ -1.47
CD44-204ENST00000279452 GMEB1Q9Y692 573 aa5.87□□□□□ -1.47
CD44-204ENST00000279452 NCKAP5O14513 1909 aa5.87□□□□□ -1.47
CD44-204ENST00000279452 TMEM72A0PK05 275 aa5.86□□□□□ -1.47
CD44-204ENST00000279452 ELOVL7A1L3X0 281 aa5.86□□□□□ -1.47
CD44-204ENST00000279452 CPSF4LA6NMK7 179 aaKnown RBP5.86□□□□□ -1.47
CD44-204ENST00000279452 NME4O00746 187 aa5.86□□□□□ -1.47
CD44-204ENST00000279452 TPST1O60507 370 aa5.86□□□□□ -1.47
CD44-204ENST00000279452 GMNNO75496 209 aa5.86□□□□□ -1.47
CD44-204ENST00000279452 AQP8O94778 261 aa5.86□□□□□ -1.47
CD44-204ENST00000279452 MFN2O95140 757 aa5.86□□□□□ -1.47
CD44-204ENST00000279452 ZNF682O95780 498 aa5.86□□□□□ -1.47
CD44-204ENST00000279452 FESP07332 822 aa5.86□□□□□ -1.47
CD44-204ENST00000279452 TCN1P20061 433 aaPredicted RBP5.86□□□□□ -1.47
CD44-204ENST00000279452 PTNP21246 168 aa5.86□□□□□ -1.47
CD44-204ENST00000279452 ENPP1P22413 925 aa5.86□□□□□ -1.47
CD44-204ENST00000279452 IDUAP35475 653 aa5.86□□□□□ -1.47
CD44-204ENST00000279452 DIO1P49895 249 aa5.86□□□□□ -1.47
CD44-204ENST00000279452 ASCL1P50553 236 aa5.86□□□□□ -1.47
CD44-204ENST00000279452 CSNK2A1P68400 391 aaPredicted RBP5.86□□□□□ -1.47
CD44-204ENST00000279452 IL1RL1Q01638 556 aa5.86□□□□□ -1.47
CD44-204ENST00000279452 DMTNQ08495 405 aa5.86□□□□□ -1.47
CD44-204ENST00000279452 FOXF2Q12947 444 aa5.86□□□□□ -1.47
CD44-204ENST00000279452 BNIP2Q12982 314 aa5.86□□□□□ -1.47
CD44-204ENST00000279452 MYBPHQ13203 477 aa5.86□□□□□ -1.47
CD44-204ENST00000279452 ZNF239Q16600 458 aaKnown RBP5.86□□□□□ -1.47
CD44-204ENST00000279452 EXOC3L2Q2M3D2 409 aa5.86□□□□□ -1.47
CD44-204ENST00000279452 SLC25A35Q3KQZ1 300 aa5.86□□□□□ -1.47
CD44-204ENST00000279452 SLC25A53Q5H9E4 307 aa5.86□□□□□ -1.47
CD44-204ENST00000279452 ALG10BQ5I7T1 473 aa5.86□□□□□ -1.47
CD44-204ENST00000279452 TMEM201Q5SNT2 666 aa5.86□□□□□ -1.47
CD44-204ENST00000279452 C16orf89Q6UX73 402 aa5.86□□□□□ -1.47
CD44-204ENST00000279452 DEF8Q6ZN54 512 aa5.86□□□□□ -1.47
CD44-204ENST00000279452 FCRLAQ7L513 359 aa5.86□□□□□ -1.47
CD44-204ENST00000279452 LIX1LQ8IVB5 337 aa5.86□□□□□ -1.47
CD44-204ENST00000279452 MICU2Q8IYU8 434 aa5.86□□□□□ -1.47
CD44-204ENST00000279452 C10orf53Q8N6V4 93 aa5.86□□□□□ -1.47
CD44-204ENST00000279452 RNF148Q8N7C7 305 aa5.86□□□□□ -1.47
CD44-204ENST00000279452 LILRB4Q8NHJ6 448 aa5.86□□□□□ -1.47
CD44-204ENST00000279452 RASSF5Q8WWW0 418 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms