RNA–Protein interactions for RNA: ENST00000277198.6

C9orf3-201, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2 BASIC

Gene C9orf3, Length 1,966 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-201ENST00000277198 ACTA1P68133 377 aa11.94□□□□□ -0.5
C9orf3-201ENST00000277198 POU4F2Q12837 409 aa11.94□□□□□ -0.5
C9orf3-201ENST00000277198 FHL5Q5TD97 284 aa11.94□□□□□ -0.5
C9orf3-201ENST00000277198 FBXO42Q6P3S6 717 aa11.94□□□□□ -0.5
C9orf3-201ENST00000277198 ZNF613Q6PF04 617 aa11.94□□□□□ -0.5
C9orf3-201ENST00000277198 MS4A15Q8N5U1 240 aa11.94□□□□□ -0.5
C9orf3-201ENST00000277198 YIPF7Q8N8F6 280 aa11.94□□□□□ -0.5
C9orf3-201ENST00000277198 CAMKVQ8NCB2 501 aa11.94□□□□□ -0.5
C9orf3-201ENST00000277198 NLGN4YQ8NFZ3 816 aaPredicted RBP11.94□□□□□ -0.5
C9orf3-201ENST00000277198 OR4E2Q8NGC2 313 aa11.94□□□□□ -0.5
C9orf3-201ENST00000277198 OR5W2Q8NH69 310 aa11.94□□□□□ -0.5
C9orf3-201ENST00000277198 OR14C36Q8NHC7 312 aa11.94□□□□□ -0.5
C9orf3-201ENST00000277198 COL26A1Q96A83 441 aa11.94□□□□□ -0.5
C9orf3-201ENST00000277198 UPRTQ96BW1 309 aa11.94□□□□□ -0.5
C9orf3-201ENST00000277198 LRFN5Q96NI6 719 aa11.94□□□□□ -0.5
C9orf3-201ENST00000277198 OR2A5Q96R48 311 aa11.94□□□□□ -0.5
C9orf3-201ENST00000277198 ISG20L2Q9H9L3 353 aaKnown RBP11.94□□□□□ -0.5
C9orf3-201ENST00000277198 IL21RQ9HBE5 538 aa11.94□□□□□ -0.5
C9orf3-201ENST00000277198 MRPL39Q9NYK5 338 aaKnown RBP11.94□□□□□ -0.5
C9orf3-201ENST00000277198 EXTL2Q9UBQ6 330 aa11.94□□□□□ -0.5
C9orf3-201ENST00000277198 SLC35A3Q9Y2D2 325 aa11.94□□□□□ -0.5
C9orf3-201ENST00000277198 PRSS38A1L453 326 aa11.93□□□□□ -0.5
C9orf3-201ENST00000277198 PRR23D1E9PI22 279 aaPredicted RBP11.93□□□□□ -0.5
C9orf3-201ENST00000277198 INMT-MINDY4F8WBC2 141 aa11.93□□□□□ -0.5
C9orf3-201ENST00000277198 NCR1O76036 304 aa11.93□□□□□ -0.5
C9orf3-201ENST00000277198 NTN1O95631 604 aa11.93□□□□□ -0.5
C9orf3-201ENST00000277198 PRR23D2P0DMB1 279 aaPredicted RBP11.93□□□□□ -0.5
C9orf3-201ENST00000277198 ARSBP15848 533 aa11.93□□□□□ -0.5
C9orf3-201ENST00000277198 HK1P19367 917 aa11.93□□□□□ -0.5
C9orf3-201ENST00000277198 CSNK1EP49674 416 aaKnown RBP11.93□□□□□ -0.5
C9orf3-201ENST00000277198 FXYD6P3P58550 94 aa11.93□□□□□ -0.5
C9orf3-201ENST00000277198 RACK1P63244 317 aaKnown RBP11.93□□□□□ -0.5
C9orf3-201ENST00000277198 MAB21L1Q13394 359 aa11.93□□□□□ -0.5
C9orf3-201ENST00000277198 OR1Q1Q15612 314 aa11.93□□□□□ -0.5
C9orf3-201ENST00000277198 DCST2Q5T1A1 773 aa11.93□□□□□ -0.5
C9orf3-201ENST00000277198 PAMR1Q6UXH9 720 aa11.93□□□□□ -0.5
C9orf3-201ENST00000277198 ABHD13Q7L211 337 aa11.93□□□□□ -0.5
C9orf3-201ENST00000277198 PXKQ7Z7A4 578 aa11.93□□□□□ -0.5
C9orf3-201ENST00000277198 UBE2J2Q8N2K1 259 aa11.93□□□□□ -0.5
C9orf3-201ENST00000277198 RSC1A1Q92681 617 aa11.93□□□□□ -0.5
C9orf3-201ENST00000277198 KISS1RQ969F8 398 aaPredicted RBP11.93□□□□□ -0.5
C9orf3-201ENST00000277198 MFRPQ9BY79 579 aa11.93□□□□□ -0.5
C9orf3-201ENST00000277198 DPH1Q9BZG8 443 aa11.93□□□□□ -0.5
C9orf3-201ENST00000277198 SRMSQ9H3Y6 488 aa11.93□□□□□ -0.5
C9orf3-201ENST00000277198 NPFFR2Q9Y5X5 522 aa11.93□□□□□ -0.5
C9orf3-201ENST00000277198 SPACA6W5XKT8 324 aa11.93□□□□□ -0.5
C9orf3-201ENST00000277198 C10orf142B7Z368 130 aa11.92□□□□□ -0.5
C9orf3-201ENST00000277198 SC5DO75845 299 aa11.92□□□□□ -0.5
C9orf3-201ENST00000277198 LYPD3O95274 346 aa11.92□□□□□ -0.5
C9orf3-201ENST00000277198 IFI30P13284 250 aa11.92□□□□□ -0.5
C9orf3-201ENST00000277198 HTR2AP28223 471 aa11.92□□□□□ -0.5
C9orf3-201ENST00000277198 MAT2AP31153 395 aaKnown RBP11.92□□□□□ -0.5
C9orf3-201ENST00000277198 PITPNBP48739 271 aa11.92□□□□□ -0.5
C9orf3-201ENST00000277198 FOXK2Q01167 660 aa11.92□□□□□ -0.5
C9orf3-201ENST00000277198 EFR3AQ14156 821 aa11.92□□□□□ -0.5
C9orf3-201ENST00000277198 GPR68Q15743 365 aa11.92□□□□□ -0.5
C9orf3-201ENST00000277198 WDR45BQ5MNZ6 344 aa11.92□□□□□ -0.5
C9orf3-201ENST00000277198 MANEAQ5SRI9 462 aa11.92□□□□□ -0.5
C9orf3-201ENST00000277198 MRPL2Q5T653 305 aaKnown RBP11.92□□□□□ -0.5
C9orf3-201ENST00000277198 IDNKQ5T6J7 187 aa11.92□□□□□ -0.5
C9orf3-201ENST00000277198 ZNF57Q68EA5 555 aaPredicted RBP11.92□□□□□ -0.5
C9orf3-201ENST00000277198 KIAA0895LQ68EN5 471 aa11.92□□□□□ -0.5
C9orf3-201ENST00000277198 PYHIN1Q6K0P9 492 aa11.92□□□□□ -0.5
C9orf3-201ENST00000277198 SLC37A3Q8NCC5 494 aa11.92□□□□□ -0.5
C9orf3-201ENST00000277198 AKAP1Q92667 903 aaKnown RBP eCLIP11.92□□□□□ -0.5
C9orf3-201ENST00000277198 PTP4A1Q93096 173 aa11.92□□□□□ -0.5
C9orf3-201ENST00000277198 RFT1Q96AA3 541 aa11.92□□□□□ -0.5
C9orf3-201ENST00000277198 TEAD3Q99594 435 aa11.92□□□□□ -0.5
C9orf3-201ENST00000277198 NDEL1Q9GZM8 345 aa11.92□□□□□ -0.5
C9orf3-201ENST00000277198 FGF22Q9HCT0 170 aa11.92□□□□□ -0.5
C9orf3-201ENST00000277198 TMEM9BQ9NQ34 198 aa11.92□□□□□ -0.5
C9orf3-201ENST00000277198 MALT1Q9UDY8 824 aa11.92□□□□□ -0.5
C9orf3-201ENST00000277198 SIGLEC7Q9Y286 467 aa11.92□□□□□ -0.5
C9orf3-201ENST00000277198 NCKAP1Q9Y2A7 1128 aa11.92□□□□□ -0.5
C9orf3-201ENST00000277198 MED31Q9Y3C7 131 aa11.92□□□□□ -0.5
C9orf3-201ENST00000277198 A0A1B0GVT2 93 aa11.92□□□□□ -0.5
C9orf3-201ENST00000277198 FAM183AA6NL82 134 aa11.92□□□□□ -0.5
C9orf3-201ENST00000277198 RIIAD1A6NNX1 92 aa11.92□□□□□ -0.5
C9orf3-201ENST00000277198 BTN3A3O00478 584 aa11.92□□□□□ -0.5
C9orf3-201ENST00000277198 BCAT2O15382 392 aaPredicted RBP11.92□□□□□ -0.5
C9orf3-201ENST00000277198 SERPINA3P01011 423 aa11.92□□□□□ -0.5
C9orf3-201ENST00000277198 SBK2P0C263 348 aa11.92□□□□□ -0.5
C9orf3-201ENST00000277198 MAKP20794 623 aa11.92□□□□□ -0.5
C9orf3-201ENST00000277198 MAP3K8P41279 467 aa11.92□□□□□ -0.5
C9orf3-201ENST00000277198 GNG2P59768 71 aa11.92□□□□□ -0.5
C9orf3-201ENST00000277198 RUNX2Q13950 521 aa11.92□□□□□ -0.5
C9orf3-201ENST00000277198 AMZ1Q400G9 498 aa11.92□□□□□ -0.5
C9orf3-201ENST00000277198 CREB3L2Q70SY1 520 aa11.92□□□□□ -0.5
C9orf3-201ENST00000277198 FLVCR1-AS1Q8TAF5 88 aa11.92□□□□□ -0.5
C9orf3-201ENST00000277198 BPIFA2Q96DR5 249 aa11.92□□□□□ -0.5
C9orf3-201ENST00000277198 ZNF559Q9BR84 538 aa11.92□□□□□ -0.5
C9orf3-201ENST00000277198 THAP7Q9BT49 309 aaPredicted RBP11.92□□□□□ -0.5
C9orf3-201ENST00000277198 PLSCR3Q9NRY6 295 aa11.92□□□□□ -0.5
C9orf3-201ENST00000277198 RABL2AQ9UBK7 228 aaPredicted RBP11.92□□□□□ -0.5
C9orf3-201ENST00000277198 TBC1D29Q9UFV1 150 aa11.92□□□□□ -0.5
C9orf3-201ENST00000277198 IL20RAQ9UHF4 553 aa11.92□□□□□ -0.5
C9orf3-201ENST00000277198 SCML1Q9UN30 329 aa11.92□□□□□ -0.5
C9orf3-201ENST00000277198 RABL2BQ9UNT1 228 aa11.92□□□□□ -0.5
C9orf3-201ENST00000277198 CA5BQ9Y2D0 317 aa11.92□□□□□ -0.5
C9orf3-201ENST00000277198 BOLA1Q9Y3E2 137 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms