RNA–Protein interactions for RNA: ENST00000275036.11

HMGN3-201, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

TSL 1 (best) BASIC

Gene HMGN3, Length 831 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-201ENST00000275036 INTS9Q9NV88 658 aaKnown RBP12.86□□□□□ -0.35
HMGN3-201ENST00000275036 ARGLU1Q9NWB6 273 aaPredicted RBP12.86□□□□□ -0.35
HMGN3-201ENST00000275036 NDRG3Q9UGV2 375 aa12.86□□□□□ -0.35
HMGN3-201ENST00000275036 ING1Q9UK53 422 aaPredicted RBP12.86□□□□□ -0.35
HMGN3-201ENST00000275036 PCDHB14Q9Y5E9 798 aa12.86□□□□□ -0.35
HMGN3-201ENST00000275036 DSCAMO60469 2012 aa12.86□□□□□ -0.35
HMGN3-201ENST00000275036 ARID1AO14497 2285 aa12.86□□□□□ -0.35
HMGN3-201ENST00000275036 RAI1Q7Z5J4 1906 aaPredicted RBP12.86□□□□□ -0.35
HMGN3-201ENST00000275036 CADP27708 2225 aa12.85□□□□□ -0.35
HMGN3-201ENST00000275036 C2CD3Q4AC94 2353 aa12.85□□□□□ -0.35
HMGN3-201ENST00000275036 C16orf97H3BN30 126 aa12.85□□□□□ -0.35
HMGN3-201ENST00000275036 GOSR1O95249 250 aa12.85□□□□□ -0.35
HMGN3-201ENST00000275036 ANP32DO95626 131 aa12.85□□□□□ -0.35
HMGN3-201ENST00000275036 RAF1P04049 648 aa12.85□□□□□ -0.35
HMGN3-201ENST00000275036 TFPTP0C1Z6 253 aa12.85□□□□□ -0.35
HMGN3-201ENST00000275036 NR2F1P10589 423 aa12.85□□□□□ -0.35
HMGN3-201ENST00000275036 CD53P19397 219 aa12.85□□□□□ -0.35
HMGN3-201ENST00000275036 DNASE1P24855 282 aa12.85□□□□□ -0.35
HMGN3-201ENST00000275036 LOXP28300 417 aaPredicted RBP12.85□□□□□ -0.35
HMGN3-201ENST00000275036 SLC7A1P30825 629 aa12.85□□□□□ -0.35
HMGN3-201ENST00000275036 CRATP43155 626 aa12.85□□□□□ -0.35
HMGN3-201ENST00000275036 ANXA11P50995 505 aaKnown RBP12.85□□□□□ -0.35
HMGN3-201ENST00000275036 RAC3P60763 192 aa12.85□□□□□ -0.35
HMGN3-201ENST00000275036 C6orf10Q5SRN2 563 aa12.85□□□□□ -0.35
HMGN3-201ENST00000275036 ANKRD34AQ69YU3 496 aa12.85□□□□□ -0.35
HMGN3-201ENST00000275036 NUFIP2Q7Z417 695 aaKnown RBP12.85□□□□□ -0.35
HMGN3-201ENST00000275036 KRTAP1-3Q8IUG1 177 aa12.85□□□□□ -0.35
HMGN3-201ENST00000275036 TUSC5Q8IXB3 177 aa12.85□□□□□ -0.35
HMGN3-201ENST00000275036 WDR60Q8WVS4 1066 aa12.85□□□□□ -0.35
HMGN3-201ENST00000275036 TMEM234Q8WY98 164 aa12.85□□□□□ -0.35
HMGN3-201ENST00000275036 HS3ST6Q96QI5 342 aa12.85□□□□□ -0.35
HMGN3-201ENST00000275036 ALPK1Q96QP1 1244 aa12.85□□□□□ -0.35
HMGN3-201ENST00000275036 OR5B2Q96R09 309 aa12.85□□□□□ -0.35
HMGN3-201ENST00000275036 CCDC28BQ9BUN5 200 aa12.85□□□□□ -0.35
HMGN3-201ENST00000275036 KLHL4Q9C0H6 718 aa12.85□□□□□ -0.35
HMGN3-201ENST00000275036 MTHFD2LQ9H903 347 aaPredicted RBP12.85□□□□□ -0.35
HMGN3-201ENST00000275036 TIGARQ9NQ88 270 aa12.85□□□□□ -0.35
HMGN3-201ENST00000275036 CTPS2Q9NRF8 586 aa12.85□□□□□ -0.35
HMGN3-201ENST00000275036 SLAMF8Q9P0V8 285 aa12.85□□□□□ -0.35
HMGN3-201ENST00000275036 DSPPQ9NZW4 1301 aa12.85□□□□□ -0.35
HMGN3-201ENST00000275036 FLNAP21333 2647 aaKnown RBP12.84□□□□□ -0.35
HMGN3-201ENST00000275036 SMAD9O15198 467 aaKnown RBP12.84□□□□□ -0.35
HMGN3-201ENST00000275036 BCHEP06276 602 aa12.84□□□□□ -0.35
HMGN3-201ENST00000275036 THBDP07204 575 aa12.84□□□□□ -0.35
HMGN3-201ENST00000275036 NUDT7P0C024 238 aa12.84□□□□□ -0.35
HMGN3-201ENST00000275036 CRYGSP22914 178 aa12.84□□□□□ -0.35
HMGN3-201ENST00000275036 DSTNP60981 165 aa12.84□□□□□ -0.35
HMGN3-201ENST00000275036 RNPS1Q15287 305 aaKnown RBP12.84□□□□□ -0.35
HMGN3-201ENST00000275036 DEFB113Q30KQ7 82 aa12.84□□□□□ -0.35
HMGN3-201ENST00000275036 SYT14P1Q58G82 188 aa12.84□□□□□ -0.35
HMGN3-201ENST00000275036 RPS26P11Q5JNZ5 115 aaPredicted RBP12.84□□□□□ -0.35
HMGN3-201ENST00000275036 MRPL2Q5T653 305 aaKnown RBP12.84□□□□□ -0.35
HMGN3-201ENST00000275036 BLOC1S3Q6QNY0 202 aa12.84□□□□□ -0.35
HMGN3-201ENST00000275036 STAC2Q6ZMT1 411 aa12.84□□□□□ -0.35
HMGN3-201ENST00000275036 VRK2Q86Y07 508 aa12.84□□□□□ -0.35
HMGN3-201ENST00000275036 ADGRG3Q86Y34 549 aa12.84□□□□□ -0.35
HMGN3-201ENST00000275036 TGIF2LYQ8IUE0 185 aa12.84□□□□□ -0.35
HMGN3-201ENST00000275036 MSRB3Q8IXL7 192 aa12.84□□□□□ -0.35
HMGN3-201ENST00000275036 CMIPQ8IY22 773 aa12.84□□□□□ -0.35
HMGN3-201ENST00000275036 ARFGAP2Q8N6H7 521 aa12.84□□□□□ -0.35
HMGN3-201ENST00000275036 GOLGA6L1Q8N7Z2 621 aa12.84□□□□□ -0.35
HMGN3-201ENST00000275036 ZNF563Q8TA94 476 aa12.84□□□□□ -0.35
HMGN3-201ENST00000275036 SLC38A5Q8WUX1 472 aa12.84□□□□□ -0.35
HMGN3-201ENST00000275036 DNAJA3Q96EY1 480 aa12.84□□□□□ -0.35
HMGN3-201ENST00000275036 THOC1Q96FV9 657 aaKnown RBP12.84□□□□□ -0.35
HMGN3-201ENST00000275036 ZC3HAV1LQ96H79 300 aaKnown RBP12.84□□□□□ -0.35
HMGN3-201ENST00000275036 REXO5Q96IC2 774 aaKnown RBP12.84□□□□□ -0.35
HMGN3-201ENST00000275036 PSD2Q9BQI7 771 aa12.84□□□□□ -0.35
HMGN3-201ENST00000275036 MED18Q9BUE0 208 aa12.84□□□□□ -0.35
HMGN3-201ENST00000275036 RLIMQ9NVW2 624 aa12.84□□□□□ -0.35
HMGN3-201ENST00000275036 SLC25A37Q9NYZ2 338 aa12.84□□□□□ -0.35
HMGN3-201ENST00000275036 KLHL13Q9P2N7 655 aa12.84□□□□□ -0.35
HMGN3-201ENST00000275036 P2RX2Q9UBL9 471 aa12.84□□□□□ -0.35
HMGN3-201ENST00000275036 CHST2Q9Y4C5 530 aa12.84□□□□□ -0.35
HMGN3-201ENST00000275036 CASKO14936 926 aa12.83□□□□□ -0.36
HMGN3-201ENST00000275036 PRKD3O94806 890 aa12.83□□□□□ -0.36
HMGN3-201ENST00000275036 DBIP07108 87 aaKnown RBP12.83□□□□□ -0.36
HMGN3-201ENST00000275036 PABPC4LP0CB38 370 aaKnown RBP12.83□□□□□ -0.36
HMGN3-201ENST00000275036 IL7RP16871 459 aa12.83□□□□□ -0.36
HMGN3-201ENST00000275036 EDNRAP25101 427 aa12.83□□□□□ -0.36
HMGN3-201ENST00000275036 APOBEC1P41238 236 aaKnown RBP12.83□□□□□ -0.36
HMGN3-201ENST00000275036 MAGEA8P43361 318 aa12.83□□□□□ -0.36
HMGN3-201ENST00000275036 IDH2P48735 452 aaKnown RBP12.83□□□□□ -0.36
HMGN3-201ENST00000275036 DIO1P49895 249 aa12.83□□□□□ -0.36
HMGN3-201ENST00000275036 STX1BP61266 288 aa12.83□□□□□ -0.36
HMGN3-201ENST00000275036 ADAM8P78325 824 aa12.83□□□□□ -0.36
HMGN3-201ENST00000275036 FOXD4Q12950 439 aaPredicted RBP12.83□□□□□ -0.36
HMGN3-201ENST00000275036 RGNQ15493 299 aa12.83□□□□□ -0.36
HMGN3-201ENST00000275036 PAGE3Q5JUK9 113 aa12.83□□□□□ -0.36
HMGN3-201ENST00000275036 GTF2IRD2BQ6EKJ0 949 aa12.83□□□□□ -0.36
HMGN3-201ENST00000275036 TFAP2EQ6VUC0 442 aa12.83□□□□□ -0.36
HMGN3-201ENST00000275036 ZNF836Q6ZNA1 936 aa12.83□□□□□ -0.36
HMGN3-201ENST00000275036 TMPPEQ6ZT21 453 aa12.83□□□□□ -0.36
HMGN3-201ENST00000275036 GRINAQ7Z429 371 aa12.83□□□□□ -0.36
HMGN3-201ENST00000275036 GTF2IRD2Q86UP8 949 aa12.83□□□□□ -0.36
HMGN3-201ENST00000275036 C10orf111Q8N326 155 aa12.83□□□□□ -0.36
HMGN3-201ENST00000275036 PMM1Q92871 262 aa12.83□□□□□ -0.36
HMGN3-201ENST00000275036 TMEM19Q96HH6 336 aa12.83□□□□□ -0.36
HMGN3-201ENST00000275036 ARL5BQ96KC2 179 aa12.83□□□□□ -0.36
HMGN3-201ENST00000275036 MAGEB18Q96M61 343 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms