RNA–Protein interactions for RNA: ENST00000266085.6

TIMP3-201, Transcript of TIMP metallopeptidase inhibitor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TIMP3, Length 4,603 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP3-201ENST00000266085 GGHQ92820 318 aa14.35□□□□□ -0.11
TIMP3-201ENST00000266085 ZNF578Q96N58 590 aaPredicted RBP14.35□□□□□ -0.11
TIMP3-201ENST00000266085 SLC5A7Q9GZV3 580 aa14.35□□□□□ -0.11
TIMP3-201ENST00000266085 BABAM2Q9NXR7 383 aa14.35□□□□□ -0.11
TIMP3-201ENST00000266085 AK6Q9Y3D8 172 aaKnown RBP14.35□□□□□ -0.11
TIMP3-201ENST00000266085 BRWD3Q6RI45 1802 aa14.34□□□□□ -0.11
TIMP3-201ENST00000266085 A8MV72 311 aaPredicted RBP14.34□□□□□ -0.11
TIMP3-201ENST00000266085 YY2O15391 372 aa14.34□□□□□ -0.11
TIMP3-201ENST00000266085 YKT6O15498 198 aa14.34□□□□□ -0.11
TIMP3-201ENST00000266085 IDUAP35475 653 aa14.34□□□□□ -0.11
TIMP3-201ENST00000266085 OPRL1P41146 370 aa14.34□□□□□ -0.11
TIMP3-201ENST00000266085 GPLD1P80108 840 aa14.34□□□□□ -0.11
TIMP3-201ENST00000266085 ACSM3Q53FZ2 586 aa14.34□□□□□ -0.11
TIMP3-201ENST00000266085 ATAD3CQ5T2N8 411 aa14.34□□□□□ -0.11
TIMP3-201ENST00000266085 MFSD12Q6NUT3 480 aa14.34□□□□□ -0.11
TIMP3-201ENST00000266085 DLEU7Q6UYE1 221 aa14.34□□□□□ -0.11
TIMP3-201ENST00000266085 SPEM1Q8N4L4 309 aa14.34□□□□□ -0.11
TIMP3-201ENST00000266085 POGLUT1Q8NBL1 392 aa14.34□□□□□ -0.11
TIMP3-201ENST00000266085 OR13C2Q8NGS9 318 aa14.34□□□□□ -0.11
TIMP3-201ENST00000266085 SENP5Q96HI0 755 aaPredicted RBP14.34□□□□□ -0.11
TIMP3-201ENST00000266085 LMF1Q96S06 567 aa14.34□□□□□ -0.11
TIMP3-201ENST00000266085 TNFRSF12AQ9NP84 129 aa14.34□□□□□ -0.11
TIMP3-201ENST00000266085 NLKQ9UBE8 527 aa14.34□□□□□ -0.11
TIMP3-201ENST00000266085 PPT2Q9UMR5 302 aa14.34□□□□□ -0.11
TIMP3-201ENST00000266085 DCDC2BA2VCK2 349 aa14.34□□□□□ -0.11
TIMP3-201ENST00000266085 SERINC4A6NH21 518 aa14.34□□□□□ -0.11
TIMP3-201ENST00000266085 TARM1B6A8C7 271 aa14.34□□□□□ -0.11
TIMP3-201ENST00000266085 F5H5K5 113 aa14.34□□□□□ -0.11
TIMP3-201ENST00000266085 CAPNS1P04632 268 aa14.34□□□□□ -0.11
TIMP3-201ENST00000266085 H2AFB2P0C5Z0 115 aa14.34□□□□□ -0.11
TIMP3-201ENST00000266085 ACP2P11117 423 aa14.34□□□□□ -0.11
TIMP3-201ENST00000266085 MAOAP21397 527 aa14.34□□□□□ -0.11
TIMP3-201ENST00000266085 CASP6P55212 293 aa14.34□□□□□ -0.11
TIMP3-201ENST00000266085 ARL6IP1Q15041 203 aa14.34□□□□□ -0.11
TIMP3-201ENST00000266085 BORAQ6PGQ7 559 aa14.34□□□□□ -0.11
TIMP3-201ENST00000266085 CFHR5Q9BXR6 569 aa14.34□□□□□ -0.11
TIMP3-201ENST00000266085 ZNF442Q9H7R0 627 aa14.34□□□□□ -0.11
TIMP3-201ENST00000266085 A4GALTQ9NPC4 353 aa14.34□□□□□ -0.11
TIMP3-201ENST00000266085 INPP5EQ9NRR6 644 aa14.34□□□□□ -0.11
TIMP3-201ENST00000266085 PLEK2Q9NYT0 353 aa14.34□□□□□ -0.11
TIMP3-201ENST00000266085 PADI1Q9ULC6 663 aa14.34□□□□□ -0.11
TIMP3-201ENST00000266085 TRAV18A0A075B6X5 111 aa14.34□□□□□ -0.11
TIMP3-201ENST00000266085 ZSCAN5BA6NJL1 495 aa14.34□□□□□ -0.11
TIMP3-201ENST00000266085 RAD1O60671 282 aa14.34□□□□□ -0.11
TIMP3-201ENST00000266085 LRRC56Q8IYG6 542 aaPredicted RBP14.34□□□□□ -0.11
TIMP3-201ENST00000266085 FAM71F1Q96KD3 344 aaPredicted RBP14.34□□□□□ -0.11
TIMP3-201ENST00000266085 SGPP1Q9BX95 441 aa14.34□□□□□ -0.11
TIMP3-201ENST00000266085 DAPP1Q9UN19 280 aa14.34□□□□□ -0.11
TIMP3-201ENST00000266085 MMACHCQ9Y4U1 282 aa14.34□□□□□ -0.11
TIMP3-201ENST00000266085 ZNF749O43361 778 aa14.34□□□□□ -0.11
TIMP3-201ENST00000266085 HCRTR1O43613 425 aa14.34□□□□□ -0.11
TIMP3-201ENST00000266085 KLK8O60259 260 aa14.34□□□□□ -0.11
TIMP3-201ENST00000266085 TFAP2AP05549 437 aa14.34□□□□□ -0.11
TIMP3-201ENST00000266085 S100A6P06703 90 aa14.34□□□□□ -0.11
TIMP3-201ENST00000266085 PRKAR1BP31321 381 aa14.34□□□□□ -0.11
TIMP3-201ENST00000266085 CSNK1A1P48729 337 aa14.34□□□□□ -0.11
TIMP3-201ENST00000266085 POU3F1Q03052 451 aaPredicted RBP14.34□□□□□ -0.11
TIMP3-201ENST00000266085 DCDC5Q6ZRR9 648 aa14.34□□□□□ -0.11
TIMP3-201ENST00000266085 OR4F15Q8NGB8 312 aa14.34□□□□□ -0.11
TIMP3-201ENST00000266085 LCORQ96JN0 433 aaPredicted RBP14.34□□□□□ -0.11
TIMP3-201ENST00000266085 SLC46A1Q96NT5 459 aa14.34□□□□□ -0.11
TIMP3-201ENST00000266085 COPZ2Q9P299 210 aa14.34□□□□□ -0.11
TIMP3-201ENST00000266085 MCTS1Q9ULC4 181 aaKnown RBP14.34□□□□□ -0.11
TIMP3-201ENST00000266085 ICKQ9UPZ9 632 aa14.34□□□□□ -0.11
TIMP3-201ENST00000266085 TSPAN12O95859 305 aa14.33□□□□□ -0.12
TIMP3-201ENST00000266085 F13BP05160 661 aa14.33□□□□□ -0.12
TIMP3-201ENST00000266085 ICAM2P13598 275 aa14.33□□□□□ -0.12
TIMP3-201ENST00000266085 ST6GAL1P15907 406 aa14.33□□□□□ -0.12
TIMP3-201ENST00000266085 GDF1P27539 372 aa14.33□□□□□ -0.12
TIMP3-201ENST00000266085 ZNF81P51508 661 aa14.33□□□□□ -0.12
TIMP3-201ENST00000266085 PLEKHN1Q494U1 663 aaPredicted RBP14.33□□□□□ -0.12
TIMP3-201ENST00000266085 PRAMEF20Q5VT98 475 aa14.33□□□□□ -0.12
TIMP3-201ENST00000266085 FAM205BPQ63HN1 556 aa14.33□□□□□ -0.12
TIMP3-201ENST00000266085 SLC6A19Q695T7 634 aa14.33□□□□□ -0.12
TIMP3-201ENST00000266085 TMEM205Q6UW68 189 aa14.33□□□□□ -0.12
TIMP3-201ENST00000266085 NLRP8Q86W28 1048 aa14.33□□□□□ -0.12
TIMP3-201ENST00000266085 MMP21Q8N119 569 aa14.33□□□□□ -0.12
TIMP3-201ENST00000266085 OR6T1Q8NGN1 323 aa14.33□□□□□ -0.12
TIMP3-201ENST00000266085 C4orf36Q96KX1 117 aa14.33□□□□□ -0.12
TIMP3-201ENST00000266085 ZNF160Q9HCG1 818 aa14.33□□□□□ -0.12
TIMP3-201ENST00000266085 KLHL9Q9P2J3 617 aa14.33□□□□□ -0.12
TIMP3-201ENST00000266085 POU2F3Q9UKI9 436 aa14.33□□□□□ -0.12
TIMP3-201ENST00000266085 HEMK1Q9Y5R4 338 aaPredicted RBP14.33□□□□□ -0.12
TIMP3-201ENST00000266085 TRIP12Q14669 1992 aaPredicted RBP14.33□□□□□ -0.12
TIMP3-201ENST00000266085 NUP214P35658 2090 aaPredicted RBP14.33□□□□□ -0.12
TIMP3-201ENST00000266085 VNN2O95498 520 aa14.33□□□□□ -0.12
TIMP3-201ENST00000266085 PSMB10P40306 273 aa14.33□□□□□ -0.12
TIMP3-201ENST00000266085 RPS5P46782 204 aaKnown RBP14.33□□□□□ -0.12
TIMP3-201ENST00000266085 LSM14AQ8ND56 463 aaKnown RBP14.33□□□□□ -0.12
TIMP3-201ENST00000266085 NANOS1Q8WY41 292 aaKnown RBP14.33□□□□□ -0.12
TIMP3-201ENST00000266085 FOLH1BQ9HBA9 442 aa14.33□□□□□ -0.12
TIMP3-201ENST00000266085 SIDT1Q9NXL6 827 aaKnown RBP14.33□□□□□ -0.12
TIMP3-201ENST00000266085 ALG5Q9Y673 324 aa14.33□□□□□ -0.12
TIMP3-201ENST00000266085 KRBA1A5PL33 1030 aa14.33□□□□□ -0.12
TIMP3-201ENST00000266085 SBK3P0C264 359 aa14.33□□□□□ -0.12
TIMP3-201ENST00000266085 ZNF35P13682 527 aa14.33□□□□□ -0.12
TIMP3-201ENST00000266085 LIM2P55344 173 aa14.33□□□□□ -0.12
TIMP3-201ENST00000266085 B4GALNT1Q00973 533 aa14.33□□□□□ -0.12
TIMP3-201ENST00000266085 MLLT11Q13015 90 aaPredicted RBP14.33□□□□□ -0.12
TIMP3-201ENST00000266085 ILKQ13418 452 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms