RNA–Protein interactions for RNA: ENST00000265619.6

VAPB-201, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 3,596 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-201ENST00000265619 IFNGR1P15260 489 aa8.14□□□□□ -1.11
VAPB-201ENST00000265619 C4BPBP20851 252 aa8.14□□□□□ -1.11
VAPB-201ENST00000265619 RNF219Q5W0B1 726 aaPredicted RBP8.14□□□□□ -1.11
VAPB-201ENST00000265619 SLC29A4Q7RTT9 530 aa8.14□□□□□ -1.11
VAPB-201ENST00000265619 FAM71CQ8NEG0 241 aa8.14□□□□□ -1.11
VAPB-201ENST00000265619 CCDC54Q8NEL0 328 aa8.14□□□□□ -1.11
VAPB-201ENST00000265619 OR6K3Q8NGY3 331 aa8.14□□□□□ -1.11
VAPB-201ENST00000265619 ACOT12Q8WYK0 555 aa8.14□□□□□ -1.11
VAPB-201ENST00000265619 HS6ST2Q96MM7 605 aa8.14□□□□□ -1.11
VAPB-201ENST00000265619 CLCC1Q96S66 551 aa8.14□□□□□ -1.11
VAPB-201ENST00000265619 VRK1Q99986 396 aaPredicted RBP8.14□□□□□ -1.11
VAPB-201ENST00000265619 PINK1Q9BXM7 581 aa8.14□□□□□ -1.11
VAPB-201ENST00000265619 CHRDQ9H2X0 955 aa8.14□□□□□ -1.11
VAPB-201ENST00000265619 GAREM1Q9H706 876 aa8.14□□□□□ -1.11
VAPB-201ENST00000265619 FKRPQ9H9S5 495 aa8.14□□□□□ -1.11
VAPB-201ENST00000265619 FAM120CQ9NX05 1096 aaKnown RBP8.14□□□□□ -1.11
VAPB-201ENST00000265619 LUZP4Q9P127 313 aa8.14□□□□□ -1.11
VAPB-201ENST00000265619 BACE2Q9Y5Z0 518 aa8.14□□□□□ -1.11
VAPB-201ENST00000265619 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP8.14□□□□□ -1.11
VAPB-201ENST00000265619 ZNF840PA6NDX5 716 aa8.14□□□□□ -1.11
VAPB-201ENST00000265619 FAM183AA6NL82 134 aa8.14□□□□□ -1.11
VAPB-201ENST00000265619 HMSDA8MTL9 139 aa8.14□□□□□ -1.11
VAPB-201ENST00000265619 SOCS6O14544 535 aa8.14□□□□□ -1.11
VAPB-201ENST00000265619 TGM5O43548 720 aa8.14□□□□□ -1.11
VAPB-201ENST00000265619 KLKB1P03952 638 aa8.14□□□□□ -1.11
VAPB-201ENST00000265619 MPIP34949 423 aa8.14□□□□□ -1.11
VAPB-201ENST00000265619 NSG1P42857 185 aa8.14□□□□□ -1.11
VAPB-201ENST00000265619 PCBP3P57721 371 aaKnown RBP8.14□□□□□ -1.11
VAPB-201ENST00000265619 STXBP1P61764 594 aaKnown RBP8.14□□□□□ -1.11
VAPB-201ENST00000265619 RAB40BQ12829 278 aa8.14□□□□□ -1.11
VAPB-201ENST00000265619 ZNF177Q13360 481 aaPredicted RBP8.14□□□□□ -1.11
VAPB-201ENST00000265619 DOC2AQ14183 400 aa8.14□□□□□ -1.11
VAPB-201ENST00000265619 PYY3Q5JQD4 70 aa8.14□□□□□ -1.11
VAPB-201ENST00000265619 CPTPQ5TA50 214 aa8.14□□□□□ -1.11
VAPB-201ENST00000265619 PLBD1Q6P4A8 553 aa8.14□□□□□ -1.11
VAPB-201ENST00000265619 SSX9Q7RTT3 188 aa8.14□□□□□ -1.11
VAPB-201ENST00000265619 MAMDC2Q7Z304 686 aaPredicted RBP8.14□□□□□ -1.11
VAPB-201ENST00000265619 SLC39A11Q8N1S5 342 aa8.14□□□□□ -1.11
VAPB-201ENST00000265619 OR10H5Q8NGA6 315 aa8.14□□□□□ -1.11
VAPB-201ENST00000265619 OR4A4PQ8NGN8 299 aa8.14□□□□□ -1.11
VAPB-201ENST00000265619 AKR7LQ8NHP1 331 aa8.14□□□□□ -1.11
VAPB-201ENST00000265619 SORCS1Q8WY21 1168 aa8.14□□□□□ -1.11
VAPB-201ENST00000265619 SLC25A38Q96DW6 304 aa8.14□□□□□ -1.11
VAPB-201ENST00000265619 POLR1EQ9GZS1 481 aaKnown RBP8.14□□□□□ -1.11
VAPB-201ENST00000265619 SLC22A14Q9Y267 594 aa8.14□□□□□ -1.11
VAPB-201ENST00000265619 INSL5Q9Y5Q6 135 aa8.14□□□□□ -1.11
VAPB-201ENST00000265619 GREB1Q4ZG55 1949 aa8.13□□□□□ -1.11
VAPB-201ENST00000265619 REV3LO60673 3130 aa8.13□□□□□ -1.11
VAPB-201ENST00000265619 ANTXRLA6NF34 631 aa8.13□□□□□ -1.11
VAPB-201ENST00000265619 IFITM10A6NMD0 228 aa8.13□□□□□ -1.11
VAPB-201ENST00000265619 M0R3H8 397 aa8.13□□□□□ -1.11
VAPB-201ENST00000265619 PRODHO43272 600 aa8.13□□□□□ -1.11
VAPB-201ENST00000265619 RGS9O75916 674 aaPredicted RBP8.13□□□□□ -1.11
VAPB-201ENST00000265619 LAG3P18627 525 aa8.13□□□□□ -1.11
VAPB-201ENST00000265619 RORAP35398 523 aa8.13□□□□□ -1.11
VAPB-201ENST00000265619 TTPAP49638 278 aa8.13□□□□□ -1.11
VAPB-201ENST00000265619 STARP49675 285 aa8.13□□□□□ -1.11
VAPB-201ENST00000265619 CDK5Q00535 292 aa8.13□□□□□ -1.11
VAPB-201ENST00000265619 STX4Q12846 297 aa8.13□□□□□ -1.11
VAPB-201ENST00000265619 ARL9Q6T311 187 aa8.13□□□□□ -1.11
VAPB-201ENST00000265619 FAM151BQ6UXP7 276 aa8.13□□□□□ -1.11
VAPB-201ENST00000265619 LINGO2Q7L985 606 aa8.13□□□□□ -1.11
VAPB-201ENST00000265619 IQCHQ86VS3 1027 aa8.13□□□□□ -1.11
VAPB-201ENST00000265619 KLHL36Q8N4N3 616 aa8.13□□□□□ -1.11
VAPB-201ENST00000265619 ZNF614Q8N883 585 aa8.13□□□□□ -1.11
VAPB-201ENST00000265619 RAB7BQ96AH8 199 aa8.13□□□□□ -1.11
VAPB-201ENST00000265619 ZDHHC12Q96GR4 267 aa8.13□□□□□ -1.11
VAPB-201ENST00000265619 TTTY10Q9BZA0 68 aa8.13□□□□□ -1.11
VAPB-201ENST00000265619 CHST6Q9GZX3 395 aa8.13□□□□□ -1.11
VAPB-201ENST00000265619 ATG10Q9H0Y0 220 aa8.13□□□□□ -1.11
VAPB-201ENST00000265619 CCDC86Q9H6F5 360 aaKnown RBP8.13□□□□□ -1.11
VAPB-201ENST00000265619 C8orf33Q9H7E9 229 aaPredicted RBP8.13□□□□□ -1.11
VAPB-201ENST00000265619 IL21RQ9HBE5 538 aa8.13□□□□□ -1.11
VAPB-201ENST00000265619 UFSP2Q9NUQ7 469 aa8.13□□□□□ -1.11
VAPB-201ENST00000265619 FCF1Q9Y324 198 aaKnown RBP8.13□□□□□ -1.11
VAPB-201ENST00000265619 COL4A4P53420 1690 aaPredicted RBP8.13□□□□□ -1.11
VAPB-201ENST00000265619 A0A1W2PRB8 838 aa8.13□□□□□ -1.11
VAPB-201ENST00000265619 DBX1A6NMT0 343 aa8.13□□□□□ -1.11
VAPB-201ENST00000265619 LRRN3E7EW58 273 aa8.13□□□□□ -1.11
VAPB-201ENST00000265619 TMEM189-UBE2V1I3L0A0 370 aa8.13□□□□□ -1.11
VAPB-201ENST00000265619 NARSO43776 548 aaKnown RBP8.13□□□□□ -1.11
VAPB-201ENST00000265619 PRICKLE3O43900 615 aaPredicted RBP8.13□□□□□ -1.11
VAPB-201ENST00000265619 AQP8O94778 261 aa8.13□□□□□ -1.11
VAPB-201ENST00000265619 UBL3O95164 117 aa8.13□□□□□ -1.11
VAPB-201ENST00000265619 FARS2O95363 451 aaKnown RBP8.13□□□□□ -1.11
VAPB-201ENST00000265619 POP4O95707 220 aaKnown RBP8.13□□□□□ -1.11
VAPB-201ENST00000265619 ABCD3P28288 659 aa8.13□□□□□ -1.11
VAPB-201ENST00000265619 C21orf58P58505 322 aa8.13□□□□□ -1.11
VAPB-201ENST00000265619 FCRLBQ6BAA4 426 aa8.13□□□□□ -1.11
VAPB-201ENST00000265619 PTRHD1Q6GMV3 140 aaKnown RBP8.13□□□□□ -1.11
VAPB-201ENST00000265619 OR52W1Q6IF63 320 aa8.13□□□□□ -1.11
VAPB-201ENST00000265619 ZNF322Q6U7Q0 402 aaPredicted RBP8.13□□□□□ -1.11
VAPB-201ENST00000265619 ARMC10Q8N2F6 343 aa8.13□□□□□ -1.11
VAPB-201ENST00000265619 ZNF383Q8NA42 475 aa8.13□□□□□ -1.11
VAPB-201ENST00000265619 ZSCAN1Q8NBB4 408 aa8.13□□□□□ -1.11
VAPB-201ENST00000265619 PPP1R16AQ96I34 528 aa8.13□□□□□ -1.11
VAPB-201ENST00000265619 GAL3ST1Q99999 423 aa8.13□□□□□ -1.11
VAPB-201ENST00000265619 TGIF2Q9GZN2 237 aa8.13□□□□□ -1.11
VAPB-201ENST00000265619 LAT2Q9GZY6 243 aa8.13□□□□□ -1.11
VAPB-201ENST00000265619 LRRN3Q9H3W5 708 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms