RNA–Protein interactions for RNA: ENST00000265245.9

LSG1-201, Transcript of large 60S subunit nuclear export GTPase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSG1, Length 3,572 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSG1-201ENST00000265245 RDH10Q8IZV5 341 aa9.52□□□□□ -0.89
LSG1-201ENST00000265245 UBE2J2Q8N2K1 259 aa9.52□□□□□ -0.89
LSG1-201ENST00000265245 KISS1RQ969F8 398 aaPredicted RBP9.52□□□□□ -0.89
LSG1-201ENST00000265245 ARSGQ96EG1 525 aa9.52□□□□□ -0.89
LSG1-201ENST00000265245 RBCK1Q9BYM8 510 aa9.52□□□□□ -0.89
LSG1-201ENST00000265245 SEMA6CQ9H3T2 930 aa9.52□□□□□ -0.89
LSG1-201ENST00000265245 RNF121Q9H920 327 aa9.52□□□□□ -0.89
LSG1-201ENST00000265245 MRPS33Q9Y291 106 aaKnown RBP9.52□□□□□ -0.89
LSG1-201ENST00000265245 PCDHGB7Q9Y5F8 929 aa9.52□□□□□ -0.89
LSG1-201ENST00000265245 CEP290O15078 2479 aa9.52□□□□□ -0.89
LSG1-201ENST00000265245 HMX3A6NHT5 357 aa9.52□□□□□ -0.89
LSG1-201ENST00000265245 B4DXG7 233 aa9.52□□□□□ -0.89
LSG1-201ENST00000265245 MRPL3P09001 348 aaKnown RBP9.52□□□□□ -0.89
LSG1-201ENST00000265245 PRKAR1AP10644 381 aa9.52□□□□□ -0.89
LSG1-201ENST00000265245 PEPDP12955 493 aa9.52□□□□□ -0.89
LSG1-201ENST00000265245 ST6GAL1P15907 406 aa9.52□□□□□ -0.89
LSG1-201ENST00000265245 CD53P19397 219 aa9.52□□□□□ -0.89
LSG1-201ENST00000265245 DDOSTP39656 456 aa9.52□□□□□ -0.89
LSG1-201ENST00000265245 RBM34P42696 430 aaKnown RBP9.52□□□□□ -0.89
LSG1-201ENST00000265245 AKR1D1P51857 326 aa9.52□□□□□ -0.89
LSG1-201ENST00000265245 PSG6Q00889 435 aa9.52□□□□□ -0.89
LSG1-201ENST00000265245 CRMP1Q14194 572 aa9.52□□□□□ -0.89
LSG1-201ENST00000265245 TRAM1Q15629 374 aa9.52□□□□□ -0.89
LSG1-201ENST00000265245 TBRG1Q3YBR2 411 aa9.52□□□□□ -0.89
LSG1-201ENST00000265245 CDONQ4KMG0 1287 aa9.52□□□□□ -0.89
LSG1-201ENST00000265245 FCRLBQ6BAA4 426 aa9.52□□□□□ -0.89
LSG1-201ENST00000265245 ALKBH2Q6NS38 261 aa9.52□□□□□ -0.89
LSG1-201ENST00000265245 ARHGAP11AQ6P4F7 1023 aa9.52□□□□□ -0.89
LSG1-201ENST00000265245 ZNF438Q7Z4V0 828 aa9.52□□□□□ -0.89
LSG1-201ENST00000265245 PCNPQ8WW12 178 aaKnown RBP9.52□□□□□ -0.89
LSG1-201ENST00000265245 RIT1Q92963 219 aa9.52□□□□□ -0.89
LSG1-201ENST00000265245 UQCC2Q9BRT2 126 aa9.52□□□□□ -0.89
LSG1-201ENST00000265245 OR2B2Q9GZK3 357 aa9.52□□□□□ -0.89
LSG1-201ENST00000265245 RNF32Q9H0A6 362 aa9.52□□□□□ -0.89
LSG1-201ENST00000265245 ZC4H2Q9NQZ6 224 aa9.52□□□□□ -0.89
LSG1-201ENST00000265245 MMP17Q9ULZ9 603 aa9.52□□□□□ -0.89
LSG1-201ENST00000265245 XIRP2A4UGR9 3374 aa9.51□□□□□ -0.89
LSG1-201ENST00000265245 TICRRQ7Z2Z1 1910 aa9.51□□□□□ -0.89
LSG1-201ENST00000265245 CENPXA8MT69 81 aa9.51□□□□□ -0.89
LSG1-201ENST00000265245 PLA2G10O15496 165 aa9.51□□□□□ -0.89
LSG1-201ENST00000265245 PPP1R3DO95685 299 aa9.51□□□□□ -0.89
LSG1-201ENST00000265245 CELA2BP08218 269 aaPredicted RBP9.51□□□□□ -0.89
LSG1-201ENST00000265245 SBK2P0C263 348 aa9.51□□□□□ -0.89
LSG1-201ENST00000265245 TALDO1P37837 337 aa9.51□□□□□ -0.89
LSG1-201ENST00000265245 CAPZA2P47755 286 aa9.51□□□□□ -0.89
LSG1-201ENST00000265245 CENPAP49450 140 aa9.51□□□□□ -0.89
LSG1-201ENST00000265245 ACTC1P68032 377 aa9.51□□□□□ -0.89
LSG1-201ENST00000265245 ACTA1P68133 377 aa9.51□□□□□ -0.89
LSG1-201ENST00000265245 IFITM2Q01629 132 aa9.51□□□□□ -0.89
LSG1-201ENST00000265245 IDNKQ5T6J7 187 aa9.51□□□□□ -0.89
LSG1-201ENST00000265245 LSRQ86X29 649 aaPredicted RBP9.51□□□□□ -0.89
LSG1-201ENST00000265245 SLC43A2Q8N370 569 aa9.51□□□□□ -0.89
LSG1-201ENST00000265245 LSMEM1Q8N8F7 131 aa9.51□□□□□ -0.89
LSG1-201ENST00000265245 CYB561A3Q8NBI2 242 aa9.51□□□□□ -0.89
LSG1-201ENST00000265245 PTCHD1Q96NR3 888 aa9.51□□□□□ -0.89
LSG1-201ENST00000265245 SOSTQ9BQB4 213 aa9.51□□□□□ -0.89
LSG1-201ENST00000265245 FOLH1BQ9HBA9 442 aa9.51□□□□□ -0.89
LSG1-201ENST00000265245 MCCC2Q9HCC0 563 aa9.51□□□□□ -0.89
LSG1-201ENST00000265245 FAM60AQ9NP50 221 aa9.51□□□□□ -0.89
LSG1-201ENST00000265245 RPS6KB2Q9UBS0 482 aa9.51□□□□□ -0.89
LSG1-201ENST00000265245 POMT2Q9UKY4 750 aa9.51□□□□□ -0.89
LSG1-201ENST00000265245 ARHGEF17Q96PE2 2063 aaPredicted RBP9.51□□□□□ -0.89
LSG1-201ENST00000265245 RFPL3O75679 317 aa9.51□□□□□ -0.89
LSG1-201ENST00000265245 HLA-DQB1P01920 261 aa9.51□□□□□ -0.89
LSG1-201ENST00000265245 THEGLP0DJG4 465 aa9.51□□□□□ -0.89
LSG1-201ENST00000265245 RNH1P13489 461 aaKnown RBP9.51□□□□□ -0.89
LSG1-201ENST00000265245 PRKCAP17252 672 aa9.51□□□□□ -0.89
LSG1-201ENST00000265245 PLAURQ03405 335 aa9.51□□□□□ -0.89
LSG1-201ENST00000265245 POU4F2Q12837 409 aa9.51□□□□□ -0.89
LSG1-201ENST00000265245 P2RY14Q15391 338 aa9.51□□□□□ -0.89
LSG1-201ENST00000265245 ZNF550Q7Z398 422 aa9.51□□□□□ -0.89
LSG1-201ENST00000265245 SLC2A12Q8TD20 617 aa9.51□□□□□ -0.89
LSG1-201ENST00000265245 UBASH3BQ8TF42 649 aa9.51□□□□□ -0.89
LSG1-201ENST00000265245 HOXB13Q92826 284 aaPredicted RBP9.51□□□□□ -0.89
LSG1-201ENST00000265245 SNX18Q96RF0 628 aa9.51□□□□□ -0.89
LSG1-201ENST00000265245 LMF2Q9BU23 707 aaKnown RBP9.51□□□□□ -0.89
LSG1-201ENST00000265245 ST6GALNAC1Q9NSC7 600 aaPredicted RBP9.51□□□□□ -0.89
LSG1-201ENST00000265245 RBFOX1Q9NWB1 397 aaKnown RBP9.51□□□□□ -0.89
LSG1-201ENST00000265245 FLRT3Q9NZU0 649 aa9.51□□□□□ -0.89
LSG1-201ENST00000265245 CD207Q9UJ71 328 aa9.51□□□□□ -0.89
LSG1-201ENST00000265245 SIRT4Q9Y6E7 314 aaPredicted RBP9.51□□□□□ -0.89
LSG1-201ENST00000265245 SPTY2D1-AS1A0A0U1RR47 76 aa9.5□□□□□ -0.89
LSG1-201ENST00000265245 LINC01387J3KSC0 135 aa9.5□□□□□ -0.89
LSG1-201ENST00000265245 HCRTR1O43613 425 aa9.5□□□□□ -0.89
LSG1-201ENST00000265245 PTP4A3O75365 173 aa9.5□□□□□ -0.89
LSG1-201ENST00000265245 IGHV4-34P06331 123 aa9.5□□□□□ -0.89
LSG1-201ENST00000265245 BLKP51451 505 aa9.5□□□□□ -0.89
LSG1-201ENST00000265245 CRYZQ08257 329 aaKnown RBP9.5□□□□□ -0.89
LSG1-201ENST00000265245 C1orf61Q13536 156 aa9.5□□□□□ -0.89
LSG1-201ENST00000265245 ZSWIM7Q19AV6 140 aa9.5□□□□□ -0.89
LSG1-201ENST00000265245 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.5□□□□□ -0.894e-8■■■■□ 22.9
LSG1-201ENST00000265245 HBMQ6B0K9 141 aa9.5□□□□□ -0.89
LSG1-201ENST00000265245 DGAT2L6Q6ZPD8 337 aa9.5□□□□□ -0.89
LSG1-201ENST00000265245 SLC44A3Q8N4M1 653 aa9.5□□□□□ -0.89
LSG1-201ENST00000265245 C19orf47Q8N9M1 422 aaKnown RBP9.5□□□□□ -0.89
LSG1-201ENST00000265245 NLGN4YQ8NFZ3 816 aaPredicted RBP9.5□□□□□ -0.89
LSG1-201ENST00000265245 TP53INP1Q96A56 240 aa9.5□□□□□ -0.89
LSG1-201ENST00000265245 AHCYL2Q96HN2 611 aaKnown RBP9.5□□□□□ -0.89
LSG1-201ENST00000265245 TNFRSF13CQ96RJ3 184 aa9.5□□□□□ -0.89
LSG1-201ENST00000265245 Q9N2J8 555 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms