RNA–Protein interactions for RNA: ENST00000264012.8

CDH3-201, Transcript of cadherin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH3, Length 4,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-201ENST00000264012 SLC6A19Q695T7 634 aa13.03□□□□□ -0.32
CDH3-201ENST00000264012 LAS2Q8IYD9 372 aa13.03□□□□□ -0.32
CDH3-201ENST00000264012 OR6T1Q8NGN1 323 aa13.03□□□□□ -0.32
CDH3-201ENST00000264012 ZNF160Q9HCG1 818 aa13.03□□□□□ -0.32
CDH3-201ENST00000264012 PET100P0DJ07 73 aa13.03□□□□□ -0.32
CDH3-201ENST00000264012 ACPPP15309 386 aa13.03□□□□□ -0.32
CDH3-201ENST00000264012 SLC2A5P22732 501 aa13.03□□□□□ -0.32
CDH3-201ENST00000264012 PRKAR1BP31321 381 aa13.03□□□□□ -0.32
CDH3-201ENST00000264012 OLIG3Q7RTU3 272 aa13.03□□□□□ -0.32
CDH3-201ENST00000264012 LIMS2Q7Z4I7 341 aa13.03□□□□□ -0.32
CDH3-201ENST00000264012 LRRC56Q8IYG6 542 aaPredicted RBP13.03□□□□□ -0.32
CDH3-201ENST00000264012 OR5J2Q8NH18 312 aa13.03□□□□□ -0.32
CDH3-201ENST00000264012 MUL1Q969V5 352 aa13.03□□□□□ -0.32
CDH3-201ENST00000264012 C6orf106Q9H6K1 298 aaPredicted RBP13.03□□□□□ -0.32
CDH3-201ENST00000264012 MMP17Q9ULZ9 603 aa13.03□□□□□ -0.32
CDH3-201ENST00000264012 PEX11BO96011 259 aa13.03□□□□□ -0.32
CDH3-201ENST00000264012 CD63P08962 238 aa13.03□□□□□ -0.32
CDH3-201ENST00000264012 SBK3P0C264 359 aa13.03□□□□□ -0.32
CDH3-201ENST00000264012 ELAVL4P26378 380 aaKnown RBP13.03□□□□□ -0.32
CDH3-201ENST00000264012 ARRB2P32121 409 aa13.03□□□□□ -0.32
CDH3-201ENST00000264012 PBX2P40425 430 aa13.03□□□□□ -0.32
CDH3-201ENST00000264012 CSNK1A1P48729 337 aa13.03□□□□□ -0.32
CDH3-201ENST00000264012 PTH2RP49190 550 aa13.03□□□□□ -0.32
CDH3-201ENST00000264012 CASP6P55212 293 aa13.03□□□□□ -0.32
CDH3-201ENST00000264012 POU3F1Q03052 451 aaPredicted RBP13.03□□□□□ -0.32
CDH3-201ENST00000264012 SQSTM1Q13501 440 aa13.03□□□□□ -0.32
CDH3-201ENST00000264012 NKAIN2Q5VXU1 208 aa13.03□□□□□ -0.32
CDH3-201ENST00000264012 MBOAT2Q6ZWT7 520 aa13.03□□□□□ -0.32
CDH3-201ENST00000264012 TECPR1Q7Z6L1 1165 aa13.03□□□□□ -0.32
CDH3-201ENST00000264012 RPL3LQ92901 407 aaKnown RBP13.03□□□□□ -0.32
CDH3-201ENST00000264012 MYEF2Q9P2K5 600 aaKnown RBP13.03□□□□□ -0.32
CDH3-201ENST00000264012 PISDQ9UG56 409 aa13.03□□□□□ -0.32
CDH3-201ENST00000264012 PAPPA2Q9BXP8 1791 aa13.02□□□□□ -0.32
CDH3-201ENST00000264012 CLDN24A6NM45 220 aa13.02□□□□□ -0.32
CDH3-201ENST00000264012 SSTR4P31391 388 aa13.02□□□□□ -0.32
CDH3-201ENST00000264012 OPRD1P41143 372 aa13.02□□□□□ -0.32
CDH3-201ENST00000264012 CYHR1Q6ZMK1 362 aa13.02□□□□□ -0.32
CDH3-201ENST00000264012 FN3KQ9H479 309 aa13.02□□□□□ -0.32
CDH3-201ENST00000264012 TREM1Q9NP99 234 aa13.02□□□□□ -0.32
CDH3-201ENST00000264012 MED17Q9NVC6 651 aa13.02□□□□□ -0.32
CDH3-201ENST00000264012 PAQR5Q9NXK6 330 aaPredicted RBP13.02□□□□□ -0.32
CDH3-201ENST00000264012 SIDT1Q9NXL6 827 aaKnown RBP13.02□□□□□ -0.32
CDH3-201ENST00000264012 A0A1B0GVC2 190 aa13.02□□□□□ -0.32
CDH3-201ENST00000264012 CTNSO60931 367 aa13.02□□□□□ -0.32
CDH3-201ENST00000264012 RP2O75695 350 aa13.02□□□□□ -0.32
CDH3-201ENST00000264012 BMP1P13497 986 aa13.02□□□□□ -0.32
CDH3-201ENST00000264012 HOXD12P35452 270 aa13.02□□□□□ -0.32
CDH3-201ENST00000264012 CSNK2A1P68400 391 aaPredicted RBP13.02□□□□□ -0.32
CDH3-201ENST00000264012 IL20RBQ6UXL0 311 aa13.02□□□□□ -0.32
CDH3-201ENST00000264012 NPRL2Q8WTW4 380 aa13.02□□□□□ -0.32
CDH3-201ENST00000264012 MS4A6EQ96DS6 147 aa13.02□□□□□ -0.32
CDH3-201ENST00000264012 PLEK2Q9NYT0 353 aa13.02□□□□□ -0.32
CDH3-201ENST00000264012 PSORS1C1Q9UIG5 152 aa13.02□□□□□ -0.32
CDH3-201ENST00000264012 ASB4Q9Y574 426 aa13.02□□□□□ -0.32
CDH3-201ENST00000264012 LAMB2P55268 1798 aa13.02□□□□□ -0.33
CDH3-201ENST00000264012 A0A1B0GTW7 788 aa13.02□□□□□ -0.33
CDH3-201ENST00000264012 PCP4L1A6NKN8 68 aa13.02□□□□□ -0.33
CDH3-201ENST00000264012 EFCAB7A8K855 629 aa13.02□□□□□ -0.33
CDH3-201ENST00000264012 TMX2-CTNND1H3BSU7 103 aa13.02□□□□□ -0.33
CDH3-201ENST00000264012 ZNF35P13682 527 aa13.02□□□□□ -0.33
CDH3-201ENST00000264012 HNRNPFP52597 415 aaKnown RBP13.02□□□□□ -0.33
CDH3-201ENST00000264012 SMAD2Q15796 467 aaKnown RBP13.02□□□□□ -0.33
CDH3-201ENST00000264012 FOXN4Q96NZ1 517 aa13.02□□□□□ -0.33
CDH3-201ENST00000264012 TNFRSF13CQ96RJ3 184 aa13.02□□□□□ -0.33
CDH3-201ENST00000264012 NIPSNAP1Q9BPW8 284 aa13.02□□□□□ -0.33
CDH3-201ENST00000264012 KATNB1Q9BVA0 655 aa13.02□□□□□ -0.33
CDH3-201ENST00000264012 AMBRA1Q9C0C7 1298 aa13.02□□□□□ -0.33
CDH3-201ENST00000264012 HCRTR1O43613 425 aa13.02□□□□□ -0.33
CDH3-201ENST00000264012 TACR3P29371 465 aa13.02□□□□□ -0.33
CDH3-201ENST00000264012 CDK10Q15131 360 aa13.02□□□□□ -0.33
CDH3-201ENST00000264012 GARNL3Q5VVW2 1013 aa13.02□□□□□ -0.33
CDH3-201ENST00000264012 SPAG16Q8N0X2 631 aa13.02□□□□□ -0.33
CDH3-201ENST00000264012 MFSD8Q8NHS3 518 aa13.02□□□□□ -0.33
CDH3-201ENST00000264012 RASD1Q9Y272 281 aa13.02□□□□□ -0.33
CDH3-201ENST00000264012 A0A1B0GWA3 101 aa13.01□□□□□ -0.33
CDH3-201ENST00000264012 OR5K3A6NET4 321 aa13.01□□□□□ -0.33
CDH3-201ENST00000264012 A6NL46 340 aa13.01□□□□□ -0.33
CDH3-201ENST00000264012 MPIG6BO95866 241 aa13.01□□□□□ -0.33
CDH3-201ENST00000264012 MANEAQ5SRI9 462 aa13.01□□□□□ -0.33
CDH3-201ENST00000264012 TMEM64Q6YI46 380 aa13.01□□□□□ -0.33
CDH3-201ENST00000264012 DUSP19Q8WTR2 217 aa13.01□□□□□ -0.33
CDH3-201ENST00000264012 MRI1Q9BV20 369 aa13.01□□□□□ -0.33
CDH3-201ENST00000264012 MED20Q9H944 212 aa13.01□□□□□ -0.33
CDH3-201ENST00000264012 SPHK1Q9NYA1 384 aa13.01□□□□□ -0.33
CDH3-201ENST00000264012 HIF3AQ9Y2N7 669 aa13.01□□□□□ -0.33
CDH3-201ENST00000264012 HEMK1Q9Y5R4 338 aaPredicted RBP13.01□□□□□ -0.33
CDH3-201ENST00000264012 MARF1Q9Y4F3 1742 aaKnown RBP13.01□□□□□ -0.33
CDH3-201ENST00000264012 H7C417 338 aa13.01□□□□□ -0.33
CDH3-201ENST00000264012 SLC16A6O15403 523 aa13.01□□□□□ -0.33
CDH3-201ENST00000264012 FNTBP49356 437 aa13.01□□□□□ -0.33
CDH3-201ENST00000264012 TMEM244Q5VVB8 128 aa13.01□□□□□ -0.33
CDH3-201ENST00000264012 MED25Q71SY5 747 aa13.01□□□□□ -0.33
CDH3-201ENST00000264012 ULBP3Q9BZM4 244 aa13.01□□□□□ -0.33
CDH3-201ENST00000264012 KCNS2Q9ULS6 477 aa13.01□□□□□ -0.33
CDH3-201ENST00000264012 HHLA2Q9UM44 414 aa13.01□□□□□ -0.33
CDH3-201ENST00000264012 hCG_1807616A0A1W2PRN6 198 aa13.01□□□□□ -0.33
CDH3-201ENST00000264012 TARM1B6A8C7 271 aa13.01□□□□□ -0.33
CDH3-201ENST00000264012 F5H0A9 414 aaPredicted RBP13.01□□□□□ -0.33
CDH3-201ENST00000264012 YY2O15391 372 aa13.01□□□□□ -0.33
CDH3-201ENST00000264012 SLC19A1P41440 591 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms