RNA–Protein interactions for RNA: ENST00000263780.8

CHMP2B-201, Transcript of charged multivesicular body protein 2B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2B, Length 2,557 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-201ENST00000263780 APOC3P02656 99 aa11.48□□□□□ -0.57
CHMP2B-201ENST00000263780 SOD2P04179 222 aa11.48□□□□□ -0.57
CHMP2B-201ENST00000263780 HOXB3P14651 431 aaPredicted RBP11.48□□□□□ -0.57
CHMP2B-201ENST00000263780 ZNF3P17036 446 aa11.48□□□□□ -0.57
CHMP2B-201ENST00000263780 CD96P40200 585 aa11.48□□□□□ -0.57
CHMP2B-201ENST00000263780 CBX5P45973 191 aa11.48□□□□□ -0.57
CHMP2B-201ENST00000263780 GPR1P46091 355 aa11.48□□□□□ -0.57
CHMP2B-201ENST00000263780 SFRP5Q5T4F7 317 aa11.48□□□□□ -0.57
CHMP2B-201ENST00000263780 MTFR2Q6P444 385 aa11.48□□□□□ -0.57
CHMP2B-201ENST00000263780 TMEM17Q86X19 198 aa11.48□□□□□ -0.57
CHMP2B-201ENST00000263780 IZUMO1Q8IYV9 350 aa11.48□□□□□ -0.57
CHMP2B-201ENST00000263780 STPG2Q8N412 459 aa11.48□□□□□ -0.57
CHMP2B-201ENST00000263780 RAB42Q8N4Z0 105 aa11.48□□□□□ -0.57
CHMP2B-201ENST00000263780 TMIEQ8NEW7 156 aa11.48□□□□□ -0.57
CHMP2B-201ENST00000263780 OR5AR1Q8NGP9 310 aa11.48□□□□□ -0.57
CHMP2B-201ENST00000263780 OR1S1Q8NH92 325 aa11.48□□□□□ -0.57
CHMP2B-201ENST00000263780 ADAMTS15Q8TE58 950 aa11.48□□□□□ -0.57
CHMP2B-201ENST00000263780 TFGQ92734 400 aaPredicted RBP11.48□□□□□ -0.57
CHMP2B-201ENST00000263780 PRAP1Q96NZ9 151 aa11.48□□□□□ -0.57
CHMP2B-201ENST00000263780 SLC38A3Q99624 504 aa11.48□□□□□ -0.57
CHMP2B-201ENST00000263780 NPAS1Q99742 590 aa11.48□□□□□ -0.57
CHMP2B-201ENST00000263780 OR52A5Q9H2C5 316 aa11.48□□□□□ -0.57
CHMP2B-201ENST00000263780 FBXL2Q9UKC9 423 aa11.48□□□□□ -0.57
CHMP2B-201ENST00000263780 ANTXRLA6NF34 631 aa11.47□□□□□ -0.57
CHMP2B-201ENST00000263780 GLTPD2A6NH11 291 aa11.47□□□□□ -0.57
CHMP2B-201ENST00000263780 NUPL2O15504 423 aaKnown RBP11.47□□□□□ -0.57
CHMP2B-201ENST00000263780 GPRIN2O60269 458 aa11.47□□□□□ -0.57
CHMP2B-201ENST00000263780 IFNGP01579 166 aa11.47□□□□□ -0.57
CHMP2B-201ENST00000263780 THY1P04216 161 aa11.47□□□□□ -0.57
CHMP2B-201ENST00000263780 MRPL3P09001 348 aaKnown RBP11.47□□□□□ -0.57
CHMP2B-201ENST00000263780 POU3F2P20265 443 aaPredicted RBP11.47□□□□□ -0.57
CHMP2B-201ENST00000263780 STXBP1P61764 594 aaKnown RBP11.47□□□□□ -0.57
CHMP2B-201ENST00000263780 CDK5R1Q15078 307 aa11.47□□□□□ -0.57
CHMP2B-201ENST00000263780 MPPED2Q15777 294 aa11.47□□□□□ -0.57
CHMP2B-201ENST00000263780 STK11Q15831 433 aa11.47□□□□□ -0.57
CHMP2B-201ENST00000263780 RPL22L1Q6P5R6 122 aaKnown RBP11.47□□□□□ -0.57
CHMP2B-201ENST00000263780 UBE2Q1Q7Z7E8 422 aa11.47□□□□□ -0.57
CHMP2B-201ENST00000263780 C11orf96Q7Z7L8 435 aa11.47□□□□□ -0.57
CHMP2B-201ENST00000263780 OR5J2Q8NH18 312 aa11.47□□□□□ -0.57
CHMP2B-201ENST00000263780 SP7Q8TDD2 431 aaPredicted RBP11.47□□□□□ -0.57
CHMP2B-201ENST00000263780 ZFPM2Q8WW38 1151 aa11.47□□□□□ -0.57
CHMP2B-201ENST00000263780 NSMAFQ92636 917 aa11.47□□□□□ -0.57
CHMP2B-201ENST00000263780 ZG16BQ96DA0 208 aa11.47□□□□□ -0.57
CHMP2B-201ENST00000263780 DPH1Q9BZG8 443 aa11.47□□□□□ -0.57
CHMP2B-201ENST00000263780 SLC7A5P2Q9GIP4 190 aa11.47□□□□□ -0.57
CHMP2B-201ENST00000263780 AK6Q9Y3D8 172 aaKnown RBP11.47□□□□□ -0.57
CHMP2B-201ENST00000263780 SELENOFO60613 162 aa11.47□□□□□ -0.57
CHMP2B-201ENST00000263780 HPP00738 406 aa11.47□□□□□ -0.57
CHMP2B-201ENST00000263780 MNDAP41218 407 aa11.47□□□□□ -0.57
CHMP2B-201ENST00000263780 S100A12P80511 92 aa11.47□□□□□ -0.57
CHMP2B-201ENST00000263780 IL10RAQ13651 578 aa11.47□□□□□ -0.57
CHMP2B-201ENST00000263780 PUS10Q3MIT2 529 aaKnown RBP11.47□□□□□ -0.57
CHMP2B-201ENST00000263780 ASTLQ6HA08 431 aaPredicted RBP11.47□□□□□ -0.57
CHMP2B-201ENST00000263780 RPTNQ6XPR3 784 aa11.47□□□□□ -0.57
CHMP2B-201ENST00000263780 SLC43A2Q8N370 569 aa11.47□□□□□ -0.57
CHMP2B-201ENST00000263780 DNAAF1Q8NEP3 725 aa11.47□□□□□ -0.57
CHMP2B-201ENST00000263780 OR6K3Q8NGY3 331 aa11.47□□□□□ -0.57
CHMP2B-201ENST00000263780 LILRB1Q8NHL6 650 aaPredicted RBP11.47□□□□□ -0.57
CHMP2B-201ENST00000263780 C1orf216Q8TAB5 229 aa11.47□□□□□ -0.57
CHMP2B-201ENST00000263780 HCAR1Q9BXC0 346 aa11.47□□□□□ -0.57
CHMP2B-201ENST00000263780 VN1R3Q9BXE9 311 aa11.47□□□□□ -0.57
CHMP2B-201ENST00000263780 SLC6A17Q9H1V8 727 aa11.47□□□□□ -0.57
CHMP2B-201ENST00000263780 IFT22Q9H7X7 185 aa11.47□□□□□ -0.57
CHMP2B-201ENST00000263780 SLC6A20Q9NP91 592 aa11.47□□□□□ -0.57
CHMP2B-201ENST00000263780 C14orf105Q9NVL8 296 aa11.47□□□□□ -0.57
CHMP2B-201ENST00000263780 OPN4Q9UHM6 478 aa11.47□□□□□ -0.57
CHMP2B-201ENST00000263780 NTNG1Q9Y2I2 539 aa11.47□□□□□ -0.57
CHMP2B-201ENST00000263780 ZBTB32Q9Y2Y4 487 aaPredicted RBP11.47□□□□□ -0.57
CHMP2B-201ENST00000263780 FXYD6-FXYD2A0A087WZ82 144 aa11.46□□□□□ -0.57
CHMP2B-201ENST00000263780 LRIT2A6NDA9 550 aa11.46□□□□□ -0.57
CHMP2B-201ENST00000263780 POM121CA8CG34 1229 aa11.46□□□□□ -0.57
CHMP2B-201ENST00000263780 F5H5P2 479 aa11.46□□□□□ -0.57
CHMP2B-201ENST00000263780 DNASE2O00115 360 aaPredicted RBP11.46□□□□□ -0.57
CHMP2B-201ENST00000263780 EGFP01133 1207 aa11.46□□□□□ -0.57
CHMP2B-201ENST00000263780 OR2T7P0C7T2 308 aa11.46□□□□□ -0.57
CHMP2B-201ENST00000263780 ANXA7P20073 488 aaKnown RBP11.46□□□□□ -0.57
CHMP2B-201ENST00000263780 MAOBP27338 520 aa11.46□□□□□ -0.57
CHMP2B-201ENST00000263780 HOXA1P49639 335 aaPredicted RBP11.46□□□□□ -0.57
CHMP2B-201ENST00000263780 SIRPAP78324 504 aa11.46□□□□□ -0.57
CHMP2B-201ENST00000263780 SCRN3Q0VDG4 424 aa11.46□□□□□ -0.57
CHMP2B-201ENST00000263780 STX4Q12846 297 aa11.46□□□□□ -0.57
CHMP2B-201ENST00000263780 GPR162Q16538 588 aa11.46□□□□□ -0.57
CHMP2B-201ENST00000263780 NDUFAF6Q330K2 333 aa11.46□□□□□ -0.57
CHMP2B-201ENST00000263780 LINC00303Q3SY05 128 aa11.46□□□□□ -0.57
CHMP2B-201ENST00000263780 UNQ9370/PRO34162Q6UXP9 181 aa11.46□□□□□ -0.57
CHMP2B-201ENST00000263780 CCDC36Q8IYA8 594 aa11.46□□□□□ -0.57
CHMP2B-201ENST00000263780 CAMKVQ8NCB2 501 aa11.46□□□□□ -0.57
CHMP2B-201ENST00000263780 PXT1Q8NFP0 134 aa11.46□□□□□ -0.57
CHMP2B-201ENST00000263780 OR2T27Q8NH04 317 aa11.46□□□□□ -0.57
CHMP2B-201ENST00000263780 ZDHHC1Q8WTX9 485 aa11.46□□□□□ -0.57
CHMP2B-201ENST00000263780 TMEM239Q8WW34 195 aa11.46□□□□□ -0.57
CHMP2B-201ENST00000263780 ORAI1Q96D31 301 aa11.46□□□□□ -0.57
CHMP2B-201ENST00000263780 MRPS24Q96EL2 167 aaKnown RBP11.46□□□□□ -0.57
CHMP2B-201ENST00000263780 FXYD6Q9H0Q3 95 aa11.46□□□□□ -0.57
CHMP2B-201ENST00000263780 MCCC2Q9HCC0 563 aa11.46□□□□□ -0.57
CHMP2B-201ENST00000263780 EQTNQ9NQ60 294 aa11.46□□□□□ -0.57
CHMP2B-201ENST00000263780 NTMQ9P121 344 aa11.46□□□□□ -0.57
CHMP2B-201ENST00000263780 ZNF223Q9UK11 482 aaPredicted RBP11.46□□□□□ -0.57
CHMP2B-201ENST00000263780 PLCL2Q9UPR0 1127 aa11.46□□□□□ -0.57
CHMP2B-201ENST00000263780 CHURC1-FNTBB4DL54 471 aa11.46□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms