RNA–Protein interactions for RNA: ENST00000263071.8

SCARF1-201, Transcript of scavenger receptor class F member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCARF1, Length 3,443 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-201ENST00000263071 CDKN3Q16667 212 aa13.19□□□□□ -0.3
SCARF1-201ENST00000263071 MARCH9Q86YJ5 346 aa13.19□□□□□ -0.3
SCARF1-201ENST00000263071 NAXDQ8IW45 347 aa13.19□□□□□ -0.3
SCARF1-201ENST00000263071 OR4K5Q8NGD3 323 aa13.19□□□□□ -0.3
SCARF1-201ENST00000263071 TEFMQ96QE5 360 aaKnown RBP13.19□□□□□ -0.3
SCARF1-201ENST00000263071 SLC46A2Q9BY10 475 aa13.19□□□□□ -0.3
SCARF1-201ENST00000263071 GABARAPL3Q9BY60 117 aa13.19□□□□□ -0.3
SCARF1-201ENST00000263071 NDUFB11Q9NX14 153 aa13.19□□□□□ -0.3
SCARF1-201ENST00000263071 CNOT2Q9NZN8 540 aaKnown RBP13.19□□□□□ -0.3
SCARF1-201ENST00000263071 PTGFRNQ9P2B2 879 aa13.19□□□□□ -0.3
SCARF1-201ENST00000263071 C1orf226A1L170 272 aa13.19□□□□□ -0.3
SCARF1-201ENST00000263071 SOCS5O75159 536 aa13.19□□□□□ -0.3
SCARF1-201ENST00000263071 RAB3DO95716 219 aa13.19□□□□□ -0.3
SCARF1-201ENST00000263071 MRPL3P09001 348 aaKnown RBP13.19□□□□□ -0.3
SCARF1-201ENST00000263071 ACRP10323 421 aa13.19□□□□□ -0.3
SCARF1-201ENST00000263071 S100A2P29034 98 aa13.19□□□□□ -0.3
SCARF1-201ENST00000263071 MAPK8P45983 427 aa13.19□□□□□ -0.3
SCARF1-201ENST00000263071 GPR4P46093 362 aa13.19□□□□□ -0.3
SCARF1-201ENST00000263071 CLDN2P57739 230 aa13.19□□□□□ -0.3
SCARF1-201ENST00000263071 ILKQ13418 452 aa13.19□□□□□ -0.3
SCARF1-201ENST00000263071 GSG1Q2KHT4 349 aa13.19□□□□□ -0.3
SCARF1-201ENST00000263071 HDDC3Q8N4P3 179 aa13.19□□□□□ -0.3
SCARF1-201ENST00000263071 ARRDC1Q8N5I2 433 aa13.19□□□□□ -0.3
SCARF1-201ENST00000263071 ZFP3Q96NJ6 502 aa13.19□□□□□ -0.3
SCARF1-201ENST00000263071 SUCNR1Q9BXA5 334 aa13.19□□□□□ -0.3
SCARF1-201ENST00000263071 TMEM45AQ9NWC5 275 aa13.19□□□□□ -0.3
SCARF1-201ENST00000263071 A0A087X0M5 115 aa13.19□□□□□ -0.3
SCARF1-201ENST00000263071 A0A1B0GX30 115 aa13.19□□□□□ -0.3
SCARF1-201ENST00000263071 TMEM229AB2RXF0 380 aa13.19□□□□□ -0.3
SCARF1-201ENST00000263071 STK25O00506 426 aa13.19□□□□□ -0.3
SCARF1-201ENST00000263071 FZD7O75084 574 aa13.19□□□□□ -0.3
SCARF1-201ENST00000263071 F12P00748 615 aaPredicted RBP13.19□□□□□ -0.3
SCARF1-201ENST00000263071 C6P13671 934 aa13.19□□□□□ -0.3
SCARF1-201ENST00000263071 NPPBP16860 134 aa13.19□□□□□ -0.3
SCARF1-201ENST00000263071 GFOD2Q3B7J2 385 aa13.19□□□□□ -0.3
SCARF1-201ENST00000263071 AMER3Q8N944 861 aa13.19□□□□□ -0.3
SCARF1-201ENST00000263071 CWH43Q9H720 699 aa13.19□□□□□ -0.3
SCARF1-201ENST00000263071 TCF7L1Q9HCS4 588 aa13.19□□□□□ -0.3
SCARF1-201ENST00000263071 C1GALT1Q9NS00 363 aa13.19□□□□□ -0.3
SCARF1-201ENST00000263071 MRPL15Q9P015 296 aaKnown RBP13.19□□□□□ -0.3
SCARF1-201ENST00000263071 WDR87Q6ZQQ6 2873 aa13.18□□□□□ -0.3
SCARF1-201ENST00000263071 PLSCR5A0PG75 271 aa13.18□□□□□ -0.3
SCARF1-201ENST00000263071 SNAPC5O75971 98 aa13.18□□□□□ -0.3
SCARF1-201ENST00000263071 APBB3O95704 486 aa13.18□□□□□ -0.3
SCARF1-201ENST00000263071 HPXP02790 462 aa13.18□□□□□ -0.3
SCARF1-201ENST00000263071 C8AP07357 584 aa13.18□□□□□ -0.3
SCARF1-201ENST00000263071 SSR2P43308 183 aa13.18□□□□□ -0.3
SCARF1-201ENST00000263071 RGS19P49795 217 aa13.18□□□□□ -0.3
SCARF1-201ENST00000263071 TAS2R41P59536 307 aa13.18□□□□□ -0.3
SCARF1-201ENST00000263071 MELKQ14680 651 aa13.18□□□□□ -0.3
SCARF1-201ENST00000263071 TRAM1Q15629 374 aa13.18□□□□□ -0.3
SCARF1-201ENST00000263071 GRHL2Q6ISB3 625 aa13.18□□□□□ -0.3
SCARF1-201ENST00000263071 PODNL1Q6PEZ8 512 aa13.18□□□□□ -0.3
SCARF1-201ENST00000263071 SLITRK4Q8IW52 837 aa13.18□□□□□ -0.3
SCARF1-201ENST00000263071 ZNF511Q8NB15 262 aa13.18□□□□□ -0.3
SCARF1-201ENST00000263071 OR4D11Q8NGI4 311 aa13.18□□□□□ -0.3
SCARF1-201ENST00000263071 OR2A12Q8NGT7 310 aa13.18□□□□□ -0.3
SCARF1-201ENST00000263071 GLYATL1Q969I3 302 aa13.18□□□□□ -0.3
SCARF1-201ENST00000263071 MISP3Q96FF7 219 aa13.18□□□□□ -0.3
SCARF1-201ENST00000263071 IMP3Q9NV31 184 aaKnown RBP13.18□□□□□ -0.3
SCARF1-201ENST00000263071 SCN2AQ99250 2005 aa13.18□□□□□ -0.3
SCARF1-201ENST00000263071 TMEM218A2RU14 115 aa13.18□□□□□ -0.3
SCARF1-201ENST00000263071 GFYI3L273 518 aa13.18□□□□□ -0.3
SCARF1-201ENST00000263071 SLC34A2O95436 690 aa13.18□□□□□ -0.3
SCARF1-201ENST00000263071 FURINP09958 794 aa13.18□□□□□ -0.3
SCARF1-201ENST00000263071 SEC61A1P61619 476 aaKnown RBP13.18□□□□□ -0.3
SCARF1-201ENST00000263071 PLA2G7Q13093 441 aa13.18□□□□□ -0.3
SCARF1-201ENST00000263071 SLCO4C1Q6ZQN7 724 aa13.18□□□□□ -0.3
SCARF1-201ENST00000263071 OR2L5Q8NG80 312 aa13.18□□□□□ -0.3
SCARF1-201ENST00000263071 SLC22A18Q96BI1 424 aa13.18□□□□□ -0.3
SCARF1-201ENST00000263071 RNFT2Q96EX2 444 aa13.18□□□□□ -0.3
SCARF1-201ENST00000263071 FAM46AQ96IP4 442 aaKnown RBP13.18□□□□□ -0.3
SCARF1-201ENST00000263071 ASIC5Q9NY37 505 aa13.18□□□□□ -0.3
SCARF1-201ENST00000263071 SCN3AQ9NY46 2000 aa13.18□□□□□ -0.3
SCARF1-201ENST00000263071 A0A1W2PS29 197 aa13.17□□□□□ -0.3
SCARF1-201ENST00000263071 TSTD3H0UI37 97 aa13.17□□□□□ -0.3
SCARF1-201ENST00000263071 PSMD9O00233 223 aa13.17□□□□□ -0.3
SCARF1-201ENST00000263071 SUSD5O60279 629 aa13.17□□□□□ -0.3
SCARF1-201ENST00000263071 GPR37L1O60883 481 aa13.17□□□□□ -0.3
SCARF1-201ENST00000263071 ZP1P60852 638 aa13.17□□□□□ -0.3
SCARF1-201ENST00000263071 PLEKHS1Q5SXH7 462 aa13.17□□□□□ -0.3
SCARF1-201ENST00000263071 OR5M10Q6IEU7 315 aa13.17□□□□□ -0.3
SCARF1-201ENST00000263071 TCTN3Q6NUS6 607 aa13.17□□□□□ -0.3
SCARF1-201ENST00000263071 POMGNT2Q8NAT1 580 aa13.17□□□□□ -0.3
SCARF1-201ENST00000263071 DMBX1Q8NFW5 382 aa13.17□□□□□ -0.3
SCARF1-201ENST00000263071 OR51G2Q8NGK0 314 aa13.17□□□□□ -0.3
SCARF1-201ENST00000263071 MAPKAP1Q9BPZ7 522 aa13.17□□□□□ -0.3
SCARF1-201ENST00000263071 RSRP1Q9BUV0 290 aa13.17□□□□□ -0.3
SCARF1-201ENST00000263071 POLDIP3Q9BY77 421 aaKnown RBP13.17□□□□□ -0.3
SCARF1-201ENST00000263071 RNF32Q9H0A6 362 aa13.17□□□□□ -0.3
SCARF1-201ENST00000263071 SLC25A32Q9H2D1 315 aa13.17□□□□□ -0.3
SCARF1-201ENST00000263071 H2AFY2Q9P0M6 372 aaPredicted RBP13.17□□□□□ -0.3
SCARF1-201ENST00000263071 RPL36Q9Y3U8 105 aaKnown RBP13.17□□□□□ -0.3
SCARF1-201ENST00000263071 GRM6O15303 877 aa13.17□□□□□ -0.3
SCARF1-201ENST00000263071 HCKP08631 526 aa13.17□□□□□ -0.3
SCARF1-201ENST00000263071 C1GALT1C1LP0DN25 315 aa13.17□□□□□ -0.3
SCARF1-201ENST00000263071 XCR1P46094 333 aa13.17□□□□□ -0.3
SCARF1-201ENST00000263071 PAPD4Q6PIY7 484 aaKnown RBP13.17□□□□□ -0.3
SCARF1-201ENST00000263071 LRRTM4Q86VH4 590 aa13.17□□□□□ -0.3
SCARF1-201ENST00000263071 OR52E4Q8NGH9 312 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms