RNA–Protein interactions for RNA: ENST00000262291.8

VMP1-201, Transcript of vacuole membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VMP1, Length 2,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-201ENST00000262291 A0A1W2PPC1 479 aa12.49□□□□□ -0.41
VMP1-201ENST00000262291 FITM1A5D6W6 292 aa12.49□□□□□ -0.41
VMP1-201ENST00000262291 STAT5AP42229 794 aa12.49□□□□□ -0.41
VMP1-201ENST00000262291 ARRB1P49407 418 aaPredicted RBP12.49□□□□□ -0.41
VMP1-201ENST00000262291 EPHA4P54764 986 aa12.49□□□□□ -0.41
VMP1-201ENST00000262291 EFNB1P98172 346 aa12.49□□□□□ -0.41
VMP1-201ENST00000262291 PGGHGQ32M88 737 aa12.49□□□□□ -0.41
VMP1-201ENST00000262291 LIPKQ5VXJ0 399 aa12.49□□□□□ -0.41
VMP1-201ENST00000262291 KIRREL2Q6UWL6 708 aa12.49□□□□□ -0.41
VMP1-201ENST00000262291 ZNF574Q6ZN55 896 aaPredicted RBP12.49□□□□□ -0.41
VMP1-201ENST00000262291 LANCL3Q6ZV70 420 aa12.49□□□□□ -0.41
VMP1-201ENST00000262291 MED25Q71SY5 747 aa12.49□□□□□ -0.41
VMP1-201ENST00000262291 ZNF367Q7RTV3 350 aa12.49□□□□□ -0.41
VMP1-201ENST00000262291 NRARPQ7Z6K4 114 aa12.49□□□□□ -0.41
VMP1-201ENST00000262291 CPOQ8IVL8 374 aa12.49□□□□□ -0.41
VMP1-201ENST00000262291 BPIFA2Q96DR5 249 aa12.49□□□□□ -0.41
VMP1-201ENST00000262291 UBQLN3Q9H347 655 aa12.49□□□□□ -0.41
VMP1-201ENST00000262291 RANGRFQ9HD47 186 aaPredicted RBP12.49□□□□□ -0.41
VMP1-201ENST00000262291 YARS2Q9Y2Z4 477 aaKnown RBP12.49□□□□□ -0.41
VMP1-201ENST00000262291 CLCA3PQ9Y6N3 262 aa12.49□□□□□ -0.41
VMP1-201ENST00000262291 H0YIG0 161 aa12.49□□□□□ -0.41
VMP1-201ENST00000262291 SURF4O15260 269 aa12.49□□□□□ -0.41
VMP1-201ENST00000262291 AK1P00568 194 aa12.49□□□□□ -0.41
VMP1-201ENST00000262291 APOA1P02647 267 aa12.49□□□□□ -0.41
VMP1-201ENST00000262291 DRD5P21918 477 aa12.49□□□□□ -0.41
VMP1-201ENST00000262291 FUT7Q11130 342 aa12.49□□□□□ -0.41
VMP1-201ENST00000262291 ALG10BQ5I7T1 473 aa12.49□□□□□ -0.41
VMP1-201ENST00000262291 PLBD1Q6P4A8 553 aa12.49□□□□□ -0.41
VMP1-201ENST00000262291 LINC00299Q6ZSB3 139 aa12.49□□□□□ -0.41
VMP1-201ENST00000262291 GATAD2BQ8WXI9 593 aa12.49□□□□□ -0.41
VMP1-201ENST00000262291 OSTF1Q92882 214 aa12.49□□□□□ -0.41
VMP1-201ENST00000262291 HCAR1Q9BXC0 346 aa12.49□□□□□ -0.41
VMP1-201ENST00000262291 POLR2J2Q9GZM3 115 aaKnown RBP12.49□□□□□ -0.41
VMP1-201ENST00000262291 HINT3Q9NQE9 182 aaKnown RBP12.49□□□□□ -0.41
VMP1-201ENST00000262291 KCNN3Q9UGI6 736 aa12.49□□□□□ -0.41
VMP1-201ENST00000262291 MKL2Q9ULH7 1088 aa12.49□□□□□ -0.41
VMP1-201ENST00000262291 CDH10Q9Y6N8 788 aa12.49□□□□□ -0.41
VMP1-201ENST00000262291 SMIM30A4D0T7 59 aa12.48□□□□□ -0.41
VMP1-201ENST00000262291 SAGE2PA6NJ88 616 aa12.48□□□□□ -0.41
VMP1-201ENST00000262291 GDF9O60383 454 aa12.48□□□□□ -0.41
VMP1-201ENST00000262291 GPX5O75715 221 aa12.48□□□□□ -0.41
VMP1-201ENST00000262291 TSPAN9O75954 239 aa12.48□□□□□ -0.41
VMP1-201ENST00000262291 TIAF1O95411 115 aa12.48□□□□□ -0.41
VMP1-201ENST00000262291 CSTAP01040 98 aa12.48□□□□□ -0.41
VMP1-201ENST00000262291 RPLP0P05388 317 aaKnown RBP12.48□□□□□ -0.41
VMP1-201ENST00000262291 FBLP22087 321 aaKnown RBP12.48□□□□□ -0.41
VMP1-201ENST00000262291 SLC9A3P48764 834 aa12.48□□□□□ -0.41
VMP1-201ENST00000262291 CDH11P55287 796 aa12.48□□□□□ -0.41
VMP1-201ENST00000262291 SPHARQ15513 63 aa12.48□□□□□ -0.41
VMP1-201ENST00000262291 NSDHLQ15738 373 aa12.48□□□□□ -0.41
VMP1-201ENST00000262291 C16orf47Q6ZP98 133 aaPredicted RBP12.48□□□□□ -0.41
VMP1-201ENST00000262291 UBQLNLQ8IYU4 475 aa12.48□□□□□ -0.41
VMP1-201ENST00000262291 LRRC17Q8N6Y2 441 aa12.48□□□□□ -0.41
VMP1-201ENST00000262291 ZSCAN1Q8NBB4 408 aa12.48□□□□□ -0.41
VMP1-201ENST00000262291 CYB561A3Q8NBI2 242 aa12.48□□□□□ -0.41
VMP1-201ENST00000262291 ANGPTL6Q8NI99 470 aa12.48□□□□□ -0.41
VMP1-201ENST00000262291 SNAPC3Q92966 411 aa12.48□□□□□ -0.41
VMP1-201ENST00000262291 TRMT61AQ96FX7 289 aaKnown RBP12.48□□□□□ -0.41
VMP1-201ENST00000262291 CRELD1Q96HD1 420 aa12.48□□□□□ -0.41
VMP1-201ENST00000262291 TBX5Q99593 518 aa12.48□□□□□ -0.41
VMP1-201ENST00000262291 NUAK2Q9H093 628 aa12.48□□□□□ -0.41
VMP1-201ENST00000262291 ANKRD19PQ9H560 264 aa12.48□□□□□ -0.41
VMP1-201ENST00000262291 IL20Q9NYY1 176 aa12.48□□□□□ -0.41
VMP1-201ENST00000262291 LSM2Q9Y333 95 aaKnown RBP12.48□□□□□ -0.41
VMP1-201ENST00000262291 MYL12BO14950 172 aa12.48□□□□□ -0.41
VMP1-201ENST00000262291 SIGLEC6O43699 453 aa12.48□□□□□ -0.41
VMP1-201ENST00000262291 TPPPO94811 219 aa12.48□□□□□ -0.41
VMP1-201ENST00000262291 CRYZQ08257 329 aaKnown RBP12.48□□□□□ -0.41
VMP1-201ENST00000262291 CD226Q15762 336 aa12.48□□□□□ -0.41
VMP1-201ENST00000262291 HLA-BQ31612 363 aa12.48□□□□□ -0.41
VMP1-201ENST00000262291 FAM69BQ5VUD6 431 aa12.48□□□□□ -0.41
VMP1-201ENST00000262291 D2HGDHQ8N465 521 aa12.48□□□□□ -0.41
VMP1-201ENST00000262291 FAM109AQ8N4B1 249 aa12.48□□□□□ -0.41
VMP1-201ENST00000262291 SLC38A9Q8NBW4 561 aa12.48□□□□□ -0.41
VMP1-201ENST00000262291 HOXB13Q92826 284 aaPredicted RBP12.48□□□□□ -0.41
VMP1-201ENST00000262291 TRIM63Q969Q1 353 aa12.48□□□□□ -0.41
VMP1-201ENST00000262291 ZNF524Q96C55 264 aa12.48□□□□□ -0.41
VMP1-201ENST00000262291 ADOQ96SZ5 270 aa12.48□□□□□ -0.41
VMP1-201ENST00000262291 CD180Q99467 661 aa12.48□□□□□ -0.41
VMP1-201ENST00000262291 IFT27Q9BW83 186 aa12.48□□□□□ -0.41
VMP1-201ENST00000262291 ZNF304Q9HCX3 659 aa12.48□□□□□ -0.41
VMP1-201ENST00000262291 TESQ9UGI8 421 aaKnown RBP12.48□□□□□ -0.41
VMP1-201ENST00000262291 MED31Q9Y3C7 131 aa12.48□□□□□ -0.41
VMP1-201ENST00000262291 A0A0B4J2E0 115 aa12.47□□□□□ -0.41
VMP1-201ENST00000262291 A0A1B0GX12 115 aa12.47□□□□□ -0.41
VMP1-201ENST00000262291 RAB36O95755 333 aa12.47□□□□□ -0.41
VMP1-201ENST00000262291 CLUP10909 449 aa12.47□□□□□ -0.41
VMP1-201ENST00000262291 PIPP12273 146 aaPredicted RBP12.47□□□□□ -0.41
VMP1-201ENST00000262291 UQCRC1P31930 480 aa12.47□□□□□ -0.41
VMP1-201ENST00000262291 MTNR1AP48039 350 aa12.47□□□□□ -0.41
VMP1-201ENST00000262291 TGM4P49221 684 aa12.47□□□□□ -0.41
VMP1-201ENST00000262291 SLC16A1P53985 500 aa12.47□□□□□ -0.41
VMP1-201ENST00000262291 GAS1P54826 345 aa12.47□□□□□ -0.41
VMP1-201ENST00000262291 SLC37A1P57057 533 aa12.47□□□□□ -0.41
VMP1-201ENST00000262291 CCL7P80098 99 aa12.47□□□□□ -0.41
VMP1-201ENST00000262291 CD83Q01151 205 aa12.47□□□□□ -0.41
VMP1-201ENST00000262291 NCF4Q15080 339 aa12.47□□□□□ -0.41
VMP1-201ENST00000262291 KLHL12Q53G59 568 aa12.47□□□□□ -0.41
VMP1-201ENST00000262291 FAM205BPQ63HN1 556 aa12.47□□□□□ -0.41
VMP1-201ENST00000262291 CBLN3Q6UW01 205 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms