RNA–Protein interactions for RNA: ENST00000261674.8

SFSWAP-201, Transcript of splicing factor SWAP, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SFSWAP, Length 3,246 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-201ENST00000261674 OAFQ86UD1 273 aa13.4□□□□□ -0.26
SFSWAP-201ENST00000261674 CCDC28AQ8IWP9 274 aa13.4□□□□□ -0.26
SFSWAP-201ENST00000261674 PIAS4Q8N2W9 510 aaPredicted RBP13.4□□□□□ -0.26
SFSWAP-201ENST00000261674 RFLNBQ8N5W9 214 aa13.4□□□□□ -0.26
SFSWAP-201ENST00000261674 OR11H7Q8NGC8 314 aa13.4□□□□□ -0.26
SFSWAP-201ENST00000261674 OR2L8Q8NGY9 312 aa13.4□□□□□ -0.26
SFSWAP-201ENST00000261674 ACOT12Q8WYK0 555 aa13.4□□□□□ -0.26
SFSWAP-201ENST00000261674 TNFRSF13CQ96RJ3 184 aa13.4□□□□□ -0.26
SFSWAP-201ENST00000261674 OR51J1Q9H342 316 aa13.4□□□□□ -0.26
SFSWAP-201ENST00000261674 FOLH1BQ9HBA9 442 aa13.4□□□□□ -0.26
SFSWAP-201ENST00000261674 FAM171A2A8MVW0 826 aa13.39□□□□□ -0.27
SFSWAP-201ENST00000261674 I3L521 148 aa13.39□□□□□ -0.27
SFSWAP-201ENST00000261674 RFPL3O75679 317 aa13.39□□□□□ -0.27
SFSWAP-201ENST00000261674 HLA-DQB1P01920 261 aa13.39□□□□□ -0.27
SFSWAP-201ENST00000261674 RAB3BP20337 219 aa13.39□□□□□ -0.27
SFSWAP-201ENST00000261674 PEBP1P30086 187 aaKnown RBP13.39□□□□□ -0.27
SFSWAP-201ENST00000261674 PKLRP30613 574 aa13.39□□□□□ -0.27
SFSWAP-201ENST00000261674 VSX2P58304 361 aaPredicted RBP13.39□□□□□ -0.27
SFSWAP-201ENST00000261674 FXYD6P3P58550 94 aa13.39□□□□□ -0.27
SFSWAP-201ENST00000261674 TNK1Q13470 666 aa13.39□□□□□ -0.27
SFSWAP-201ENST00000261674 SSX6Q7RTT6 188 aa13.39□□□□□ -0.27
SFSWAP-201ENST00000261674 SDR9C7Q8NEX9 313 aa13.39□□□□□ -0.27
SFSWAP-201ENST00000261674 SMPDL3BQ92485 455 aa13.39□□□□□ -0.27
SFSWAP-201ENST00000261674 PDCD1LG2Q9BQ51 273 aa13.39□□□□□ -0.27
SFSWAP-201ENST00000261674 ZNF559Q9BR84 538 aa13.39□□□□□ -0.27
SFSWAP-201ENST00000261674 GIMAP1-GIMAP5A0A087WTJ2 511 aa13.39□□□□□ -0.27
SFSWAP-201ENST00000261674 A0A1W2PQU0 124 aa13.39□□□□□ -0.27
SFSWAP-201ENST00000261674 CIB4A0PJX0 185 aa13.39□□□□□ -0.27
SFSWAP-201ENST00000261674 LRRN3E7EW58 273 aa13.39□□□□□ -0.27
SFSWAP-201ENST00000261674 HTR2AP28223 471 aa13.39□□□□□ -0.27
SFSWAP-201ENST00000261674 GABRA3P34903 492 aa13.39□□□□□ -0.27
SFSWAP-201ENST00000261674 RGS1Q08116 209 aa13.39□□□□□ -0.27
SFSWAP-201ENST00000261674 ZIC1Q15915 447 aa13.39□□□□□ -0.27
SFSWAP-201ENST00000261674 RPE65Q16518 533 aa13.39□□□□□ -0.27
SFSWAP-201ENST00000261674 CREB3L2Q70SY1 520 aa13.39□□□□□ -0.27
SFSWAP-201ENST00000261674 BMPERQ8N8U9 685 aa13.39□□□□□ -0.27
SFSWAP-201ENST00000261674 OR11H4Q8NGC9 324 aa13.39□□□□□ -0.27
SFSWAP-201ENST00000261674 RELTQ969Z4 430 aa13.39□□□□□ -0.27
SFSWAP-201ENST00000261674 MOAP1Q96BY2 351 aa13.39□□□□□ -0.27
SFSWAP-201ENST00000261674 GIMAP5Q96F15 307 aa13.39□□□□□ -0.27
SFSWAP-201ENST00000261674 MAP6Q96JE9 813 aa13.39□□□□□ -0.27
SFSWAP-201ENST00000261674 RBCK1Q9BYM8 510 aa13.39□□□□□ -0.27
SFSWAP-201ENST00000261674 LRRN3Q9H3W5 708 aa13.39□□□□□ -0.27
SFSWAP-201ENST00000261674 EML2O95834 649 aa13.39□□□□□ -0.27
SFSWAP-201ENST00000261674 CLDN12P56749 244 aa13.39□□□□□ -0.27
SFSWAP-201ENST00000261674 SNTB2Q13425 540 aaKnown RBP13.39□□□□□ -0.27
SFSWAP-201ENST00000261674 NNATQ16517 81 aa13.39□□□□□ -0.27
SFSWAP-201ENST00000261674 ZNF767PQ75MW2 155 aa13.39□□□□□ -0.27
SFSWAP-201ENST00000261674 OR52E2Q8NGJ4 325 aa13.39□□□□□ -0.27
SFSWAP-201ENST00000261674 CCL4L1Q8NHW4 92 aa13.39□□□□□ -0.27
SFSWAP-201ENST00000261674 MS4A3Q96HJ5 214 aa13.39□□□□□ -0.27
SFSWAP-201ENST00000261674 MS4A4EQ96PG1 132 aa13.39□□□□□ -0.27
SFSWAP-201ENST00000261674 GPR174Q9BXC1 333 aa13.39□□□□□ -0.27
SFSWAP-201ENST00000261674 FN3KQ9H479 309 aa13.39□□□□□ -0.27
SFSWAP-201ENST00000261674 SPATA2Q9UM82 520 aa13.39□□□□□ -0.27
SFSWAP-201ENST00000261674 FLVCR2Q9UPI3 526 aa13.39□□□□□ -0.27
SFSWAP-201ENST00000261674 MED31Q9Y3C7 131 aa13.39□□□□□ -0.27
SFSWAP-201ENST00000261674 CELSR3Q9NYQ7 3312 aa13.38□□□□□ -0.27
SFSWAP-201ENST00000261674 SLC35G6P0C7Q6 338 aa13.38□□□□□ -0.27
SFSWAP-201ENST00000261674 POLR2CP19387 275 aaPredicted RBP13.38□□□□□ -0.27
SFSWAP-201ENST00000261674 CFL1P23528 166 aaKnown RBP13.38□□□□□ -0.27
SFSWAP-201ENST00000261674 ZNF136P52737 540 aa13.38□□□□□ -0.27
SFSWAP-201ENST00000261674 GALEQ14376 348 aa13.38□□□□□ -0.27
SFSWAP-201ENST00000261674 TMEM92Q6UXU6 159 aa13.38□□□□□ -0.27
SFSWAP-201ENST00000261674 LINGO2Q7L985 606 aa13.38□□□□□ -0.27
SFSWAP-201ENST00000261674 PRSS41Q7RTY9 318 aa13.38□□□□□ -0.27
SFSWAP-201ENST00000261674 C9orf62Q8N4C0 152 aa13.38□□□□□ -0.27
SFSWAP-201ENST00000261674 OR5T3Q8NGG3 340 aa13.38□□□□□ -0.27
SFSWAP-201ENST00000261674 OR6K6Q8NGW6 343 aa13.38□□□□□ -0.27
SFSWAP-201ENST00000261674 SNX33Q8WV41 574 aa13.38□□□□□ -0.27
SFSWAP-201ENST00000261674 FAM3CQ92520 227 aa13.38□□□□□ -0.27
SFSWAP-201ENST00000261674 PEX11GQ96HA9 241 aa13.38□□□□□ -0.27
SFSWAP-201ENST00000261674 ERMAPQ96PL5 475 aaPredicted RBP13.38□□□□□ -0.27
SFSWAP-201ENST00000261674 SRMSQ9H3Y6 488 aa13.38□□□□□ -0.27
SFSWAP-201ENST00000261674 MED17Q9NVC6 651 aa13.38□□□□□ -0.27
SFSWAP-201ENST00000261674 ANKRD61A6NGH8 418 aa13.38□□□□□ -0.27
SFSWAP-201ENST00000261674 RCBTB2O95199 551 aa13.38□□□□□ -0.27
SFSWAP-201ENST00000261674 CEACAM5P06731 702 aa13.38□□□□□ -0.27
SFSWAP-201ENST00000261674 SBK2P0C263 348 aa13.38□□□□□ -0.27
SFSWAP-201ENST00000261674 PTHLHP12272 177 aa13.38□□□□□ -0.27
SFSWAP-201ENST00000261674 PVRP15151 417 aa13.38□□□□□ -0.27
SFSWAP-201ENST00000261674 TLX1P31314 330 aaPredicted RBP13.38□□□□□ -0.27
SFSWAP-201ENST00000261674 PLA1AQ53H76 456 aa13.38□□□□□ -0.27
SFSWAP-201ENST00000261674 SMUG1Q53HV7 270 aa13.38□□□□□ -0.27
SFSWAP-201ENST00000261674 AGBL4Q5VU57 503 aa13.38□□□□□ -0.27
SFSWAP-201ENST00000261674 PITHD1Q9GZP4 211 aaPredicted RBP13.38□□□□□ -0.27
SFSWAP-201ENST00000261674 SLC25A18Q9H1K4 315 aa13.38□□□□□ -0.27
SFSWAP-201ENST00000261674 TRPV4Q9HBA0 871 aa13.38□□□□□ -0.27
SFSWAP-201ENST00000261674 STARD5Q9NSY2 213 aa13.38□□□□□ -0.27
SFSWAP-201ENST00000261674 GNG8Q9UK08 70 aa13.38□□□□□ -0.27
SFSWAP-201ENST00000261674 TRIM3O75382 744 aaPredicted RBP13.37□□□□□ -0.27
SFSWAP-201ENST00000261674 ANXA3P12429 323 aa13.37□□□□□ -0.27
SFSWAP-201ENST00000261674 RPL4P36578 427 aaKnown RBP13.37□□□□□ -0.27
SFSWAP-201ENST00000261674 PPM1FP49593 454 aaPredicted RBP13.37□□□□□ -0.27
SFSWAP-201ENST00000261674 HES5Q5TA89 166 aa13.37□□□□□ -0.27
SFSWAP-201ENST00000261674 VN1R4Q7Z5H5 301 aa13.37□□□□□ -0.27
SFSWAP-201ENST00000261674 HSD17B8Q92506 261 aa13.37□□□□□ -0.27
SFSWAP-201ENST00000261674 DNAJA3Q96EY1 480 aa13.37□□□□□ -0.27
SFSWAP-201ENST00000261674 TIMP4Q99727 224 aa13.37□□□□□ -0.27
SFSWAP-201ENST00000261674 PRSS27Q9BQR3 290 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 270.2 ms