RNA–Protein interactions for RNA: ENST00000261556.10

TMEM260-201, Transcript of transmembrane protein 260, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TMEM260, Length 4,264 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-201ENST00000261556 KCNJ10P78508 379 aa12.16□□□□□ -0.46
TMEM260-201ENST00000261556 FABP5Q01469 135 aa12.16□□□□□ -0.46
TMEM260-201ENST00000261556 DUOXA1Q1HG43 343 aa12.16□□□□□ -0.46
TMEM260-201ENST00000261556 Q6ZTK2 550 aa12.16□□□□□ -0.46
TMEM260-201ENST00000261556 NDUFAF7Q7L592 441 aa12.16□□□□□ -0.46
TMEM260-201ENST00000261556 WDR53Q7Z5U6 358 aaPredicted RBP12.16□□□□□ -0.46
TMEM260-201ENST00000261556 NAGSQ8N159 534 aa12.16□□□□□ -0.46
TMEM260-201ENST00000261556 ZNF687Q8N1G0 1237 aa12.16□□□□□ -0.46
TMEM260-201ENST00000261556 GEMIN6Q8WXD5 167 aaKnown RBP12.16□□□□□ -0.46
TMEM260-201ENST00000261556 RFKQ969G6 155 aa12.16□□□□□ -0.46
TMEM260-201ENST00000261556 CPED1A4D0V7 1026 aa12.15□□□□□ -0.46
TMEM260-201ENST00000261556 CASC3O15234 703 aaKnown RBP12.15□□□□□ -0.46
TMEM260-201ENST00000261556 MAGEB4O15481 346 aaPredicted RBP12.15□□□□□ -0.46
TMEM260-201ENST00000261556 SLC34A2O95436 690 aa12.15□□□□□ -0.46
TMEM260-201ENST00000261556 FGF2P09038 288 aa12.15□□□□□ -0.46
TMEM260-201ENST00000261556 GIPP09681 153 aaPredicted RBP12.15□□□□□ -0.46
TMEM260-201ENST00000261556 BPIFB3P59826 476 aa12.15□□□□□ -0.46
TMEM260-201ENST00000261556 S100A10P60903 97 aa12.15□□□□□ -0.46
TMEM260-201ENST00000261556 MEF2AQ02078 507 aaPredicted RBP12.15□□□□□ -0.46
TMEM260-201ENST00000261556 ERV3-1Q14264 604 aa12.15□□□□□ -0.46
TMEM260-201ENST00000261556 SURF2Q15527 256 aaPredicted RBP12.15□□□□□ -0.46
TMEM260-201ENST00000261556 TGIF1Q15583 401 aa12.15□□□□□ -0.46
TMEM260-201ENST00000261556 NHLRC3Q5JS37 347 aa12.15□□□□□ -0.46
TMEM260-201ENST00000261556 FBXO46Q6PJ61 603 aaPredicted RBP12.15□□□□□ -0.46
TMEM260-201ENST00000261556 TERB2Q8NHR7 220 aa12.15□□□□□ -0.46
TMEM260-201ENST00000261556 NUBPLQ8TB37 319 aa12.15□□□□□ -0.46
TMEM260-201ENST00000261556 METTL21AQ8WXB1 218 aa12.15□□□□□ -0.46
TMEM260-201ENST00000261556 WDR89Q96FK6 387 aaPredicted RBP12.15□□□□□ -0.46
TMEM260-201ENST00000261556 PITX2Q99697 317 aa12.15□□□□□ -0.46
TMEM260-201ENST00000261556 MRPL22Q9NWU5 206 aaKnown RBP12.15□□□□□ -0.46
TMEM260-201ENST00000261556 GSKIPQ9P0R6 139 aa12.15□□□□□ -0.46
TMEM260-201ENST00000261556 PCDHB11Q9Y5F2 797 aa12.15□□□□□ -0.46
TMEM260-201ENST00000261556 MMP24Q9Y5R2 645 aa12.15□□□□□ -0.46
TMEM260-201ENST00000261556 ASXL3Q9C0F0 2248 aa12.15□□□□□ -0.46
TMEM260-201ENST00000261556 KDM3BQ7LBC6 1761 aa12.15□□□□□ -0.46
TMEM260-201ENST00000261556 DBX1A6NMT0 343 aa12.15□□□□□ -0.46
TMEM260-201ENST00000261556 TARM1B6A8C7 271 aa12.15□□□□□ -0.46
TMEM260-201ENST00000261556 BLOC1S5-TXNDC5H3BN57 136 aa12.15□□□□□ -0.46
TMEM260-201ENST00000261556 PRAMEF11O60813 436 aa12.15□□□□□ -0.46
TMEM260-201ENST00000261556 CLN5O75503 358 aa12.15□□□□□ -0.46
TMEM260-201ENST00000261556 TGFB1P01137 390 aa12.15□□□□□ -0.46
TMEM260-201ENST00000261556 EIF4EP06730 217 aaKnown RBP12.15□□□□□ -0.46
TMEM260-201ENST00000261556 TFPIP10646 304 aa12.15□□□□□ -0.46
TMEM260-201ENST00000261556 MPIP34949 423 aa12.15□□□□□ -0.46
TMEM260-201ENST00000261556 TAS2R41P59536 307 aa12.15□□□□□ -0.46
TMEM260-201ENST00000261556 SUSD1Q6UWL2 747 aa12.15□□□□□ -0.46
TMEM260-201ENST00000261556 Q6ZSR9 355 aa12.15□□□□□ -0.46
TMEM260-201ENST00000261556 FAM26EQ8N5C1 309 aa12.15□□□□□ -0.46
TMEM260-201ENST00000261556 OR5M9Q8NGP3 310 aa12.15□□□□□ -0.46
TMEM260-201ENST00000261556 ZNF563Q8TA94 476 aa12.15□□□□□ -0.46
TMEM260-201ENST00000261556 BBS10Q8TAM1 723 aa12.15□□□□□ -0.46
TMEM260-201ENST00000261556 GTF3AQ92664 365 aaKnown RBP12.15□□□□□ -0.46
TMEM260-201ENST00000261556 SCAMP4Q969E2 229 aa12.15□□□□□ -0.46
TMEM260-201ENST00000261556 MS4A4AQ96JQ5 239 aa12.15□□□□□ -0.46
TMEM260-201ENST00000261556 MBD1Q9UIS9 605 aaPredicted RBP12.15□□□□□ -0.46
TMEM260-201ENST00000261556 MED16Q9Y2X0 877 aa12.15□□□□□ -0.46
TMEM260-201ENST00000261556 LRP6O75581 1613 aa12.15□□□□□ -0.46
TMEM260-201ENST00000261556 TMEM127O75204 238 aa12.15□□□□□ -0.46
TMEM260-201ENST00000261556 H1F0P07305 194 aaKnown RBP12.15□□□□□ -0.46
TMEM260-201ENST00000261556 PRPS2P11908 318 aa12.15□□□□□ -0.46
TMEM260-201ENST00000261556 RPL29P47914 159 aaKnown RBP12.15□□□□□ -0.46
TMEM260-201ENST00000261556 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.15□□□□□ -0.46
TMEM260-201ENST00000261556 OR4F15Q8NGB8 312 aa12.15□□□□□ -0.46
TMEM260-201ENST00000261556 TFGQ92734 400 aaPredicted RBP12.15□□□□□ -0.46
TMEM260-201ENST00000261556 HAPLN2Q9GZV7 340 aa12.15□□□□□ -0.46
TMEM260-201ENST00000261556 ADAP2Q9NPF8 381 aa12.15□□□□□ -0.46
TMEM260-201ENST00000261556 PLCXD1Q9NUJ7 323 aa12.15□□□□□ -0.46
TMEM260-201ENST00000261556 KCNK6Q9Y257 313 aa12.15□□□□□ -0.46
TMEM260-201ENST00000261556 SLC22A14Q9Y267 594 aa12.15□□□□□ -0.46
TMEM260-201ENST00000261556 SLC9B1P1A6NJY1 282 aa12.14□□□□□ -0.47
TMEM260-201ENST00000261556 CNMDO75829 334 aa12.14□□□□□ -0.47
TMEM260-201ENST00000261556 AGFG1P52594 562 aaKnown RBP12.14□□□□□ -0.47
TMEM260-201ENST00000261556 CARD18P57730 90 aa12.14□□□□□ -0.47
TMEM260-201ENST00000261556 RGS8P57771 180 aaPredicted RBP12.14□□□□□ -0.47
TMEM260-201ENST00000261556 ADAM8P78325 824 aa12.14□□□□□ -0.47
TMEM260-201ENST00000261556 MPPED2Q15777 294 aa12.14□□□□□ -0.47
TMEM260-201ENST00000261556 GSG1Q2KHT4 349 aa12.14□□□□□ -0.47
TMEM260-201ENST00000261556 C3orf38Q5JPI3 329 aa12.14□□□□□ -0.47
TMEM260-201ENST00000261556 ZNF585AQ6P3V2 769 aa12.14□□□□□ -0.47
TMEM260-201ENST00000261556 SKA3Q8IX90 412 aa12.14□□□□□ -0.47
TMEM260-201ENST00000261556 OR4K1Q8NGD4 311 aa12.14□□□□□ -0.47
TMEM260-201ENST00000261556 ZNF75AQ96N20 296 aa12.14□□□□□ -0.47
TMEM260-201ENST00000261556 ZNF559Q9BR84 538 aa12.14□□□□□ -0.47
TMEM260-201ENST00000261556 CDCA4Q9BXL8 241 aa12.14□□□□□ -0.47
TMEM260-201ENST00000261556 LANCL2Q9NS86 450 aa12.14□□□□□ -0.47
TMEM260-201ENST00000261556 DNAJC13O75165 2243 aa12.14□□□□□ -0.47
TMEM260-201ENST00000261556 ZNF840PA6NDX5 716 aa12.14□□□□□ -0.47
TMEM260-201ENST00000261556 A8MXK9 166 aa12.14□□□□□ -0.47
TMEM260-201ENST00000261556 LDB2O43679 373 aa12.14□□□□□ -0.47
TMEM260-201ENST00000261556 ARG1P05089 322 aa12.14□□□□□ -0.47
TMEM260-201ENST00000261556 NUBP1P53384 320 aa12.14□□□□□ -0.47
TMEM260-201ENST00000261556 COL13A1Q5TAT6 717 aaPredicted RBP12.14□□□□□ -0.47
TMEM260-201ENST00000261556 EIF5AL1Q6IS14 154 aaKnown RBP12.14□□□□□ -0.47
TMEM260-201ENST00000261556 OR2G2Q8NGZ5 317 aa12.14□□□□□ -0.47
TMEM260-201ENST00000261556 SPRYD4Q8WW59 207 aaPredicted RBP12.14□□□□□ -0.47
TMEM260-201ENST00000261556 EPYCQ99645 322 aa12.14□□□□□ -0.47
TMEM260-201ENST00000261556 ALG8Q9BVK2 526 aa12.14□□□□□ -0.47
TMEM260-201ENST00000261556 OR51I1Q9H343 314 aa12.14□□□□□ -0.47
TMEM260-201ENST00000261556 NDUFB11Q9NX14 153 aa12.14□□□□□ -0.47
TMEM260-201ENST00000261556 ZSCAN32Q9NX65 697 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms