RNA–Protein interactions for RNA: ENST00000261058.2

CCDC54-201, Transcript of coiled-coil domain containing 54, humanhuman

APPRIS P1 BASIC

Gene CCDC54, Length 1,444 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC54-201ENST00000261058 TRMT10AQ8TBZ6 339 aaKnown RBP3.43□□□□□ -1.86
CCDC54-201ENST00000261058 CRYGNQ8WXF5 182 aa3.43□□□□□ -1.86
CCDC54-201ENST00000261058 PINX1Q96BK5 328 aaKnown RBP3.43□□□□□ -1.86
CCDC54-201ENST00000261058 TSNARE1Q96NA8 513 aa3.43□□□□□ -1.86
CCDC54-201ENST00000261058 CIB1Q99828 191 aa3.43□□□□□ -1.86
CCDC54-201ENST00000261058 SHCBP1LQ9BZQ2 653 aa3.43□□□□□ -1.86
CCDC54-201ENST00000261058 PAQR5Q9NXK6 330 aaPredicted RBP3.43□□□□□ -1.86
CCDC54-201ENST00000261058 TAS2R16Q9NYV7 291 aa3.43□□□□□ -1.86
CCDC54-201ENST00000261058 SENP1Q9P0U3 644 aa3.43□□□□□ -1.86
CCDC54-201ENST00000261058 RNF14Q9UBS8 474 aa3.43□□□□□ -1.86
CCDC54-201ENST00000261058 SLC7A8Q9UHI5 535 aa3.43□□□□□ -1.86
CCDC54-201ENST00000261058 ZNF490Q9ULM2 529 aaPredicted RBP3.43□□□□□ -1.86
CCDC54-201ENST00000261058 RNF24Q9Y225 148 aa3.43□□□□□ -1.86
CCDC54-201ENST00000261058 MMP24Q9Y5R2 645 aa3.43□□□□□ -1.86
CCDC54-201ENST00000261058 ELP1O95163 1332 aa3.42□□□□□ -1.86
CCDC54-201ENST00000261058 IGKV3D-20A0A0C4DH25 116 aa3.42□□□□□ -1.86
CCDC54-201ENST00000261058 GOLGA8QA0A0J9YX86 632 aa3.42□□□□□ -1.86
CCDC54-201ENST00000261058 GABRR3A8MPY1 467 aa3.42□□□□□ -1.86
CCDC54-201ENST00000261058 CYSRT1A8MQ03 144 aa3.42□□□□□ -1.86
CCDC54-201ENST00000261058 SGK494L7N484 410 aa3.42□□□□□ -1.86
CCDC54-201ENST00000261058 PSMD11O00231 422 aa3.42□□□□□ -1.86
CCDC54-201ENST00000261058 ZNF354AO60765 605 aaPredicted RBP3.42□□□□□ -1.86
CCDC54-201ENST00000261058 DNAJB6O75190 326 aa3.42□□□□□ -1.86
CCDC54-201ENST00000261058 CDH16O75309 829 aa3.42□□□□□ -1.86
CCDC54-201ENST00000261058 CBR3O75828 277 aa3.42□□□□□ -1.86
CCDC54-201ENST00000261058 TGM6O95932 706 aa3.42□□□□□ -1.86
CCDC54-201ENST00000261058 GOT2P00505 430 aaKnown RBP3.42□□□□□ -1.86
CCDC54-201ENST00000261058 HMGN1P05114 100 aa3.42□□□□□ -1.86
CCDC54-201ENST00000261058 GLAP06280 429 aa3.42□□□□□ -1.86
CCDC54-201ENST00000261058 PLEKP08567 350 aaPredicted RBP3.42□□□□□ -1.86
CCDC54-201ENST00000261058 HOXB7P09629 217 aa3.42□□□□□ -1.86
CCDC54-201ENST00000261058 CYP11B1P15538 503 aa3.42□□□□□ -1.86
CCDC54-201ENST00000261058 MX1P20591 662 aa3.42□□□□□ -1.86
CCDC54-201ENST00000261058 CYP2B6P20813 491 aa3.42□□□□□ -1.86
CCDC54-201ENST00000261058 SPAM1P38567 509 aa3.42□□□□□ -1.86
CCDC54-201ENST00000261058 RGS4P49798 205 aa3.42□□□□□ -1.86
CCDC54-201ENST00000261058 TAF6P49848 677 aa3.42□□□□□ -1.86
CCDC54-201ENST00000261058 MFAP2P55001 183 aa3.42□□□□□ -1.86
CCDC54-201ENST00000261058 TGM3Q08188 693 aa3.42□□□□□ -1.86
CCDC54-201ENST00000261058 SLC1A5Q15758 541 aa3.42□□□□□ -1.86
CCDC54-201ENST00000261058 ADPRMQ3LIE5 342 aa3.42□□□□□ -1.86
CCDC54-201ENST00000261058 HSP90AA4PQ58FG1 418 aa3.42□□□□□ -1.86
CCDC54-201ENST00000261058 TTMPQ5BVD1 217 aa3.42□□□□□ -1.86
CCDC54-201ENST00000261058 ACER2Q5QJU3 275 aa3.42□□□□□ -1.86
CCDC54-201ENST00000261058 SEL1L2Q5TEA6 688 aa3.42□□□□□ -1.86
CCDC54-201ENST00000261058 PTRHD1Q6GMV3 140 aaKnown RBP3.42□□□□□ -1.86
CCDC54-201ENST00000261058 LEG1Q6P5S2 330 aa3.42□□□□□ -1.86
CCDC54-201ENST00000261058 CBLN3Q6UW01 205 aa3.42□□□□□ -1.86
CCDC54-201ENST00000261058 SYT10Q6XYQ8 523 aa3.42□□□□□ -1.86
CCDC54-201ENST00000261058 TPGS1Q6ZTW0 290 aa3.42□□□□□ -1.86
CCDC54-201ENST00000261058 USP50Q70EL3 339 aaPredicted RBP3.42□□□□□ -1.86
CCDC54-201ENST00000261058 CEACAM19Q7Z692 300 aa3.42□□□□□ -1.86
CCDC54-201ENST00000261058 KATNAL2Q8IYT4 538 aa3.42□□□□□ -1.86
CCDC54-201ENST00000261058 LRRC34Q8IZ02 419 aa3.42□□□□□ -1.86
CCDC54-201ENST00000261058 ANKFN1Q8N957 763 aa3.42□□□□□ -1.86
CCDC54-201ENST00000261058 OR8K1Q8NGG5 319 aa3.42□□□□□ -1.86
CCDC54-201ENST00000261058 ZNF461Q8TAF7 563 aa3.42□□□□□ -1.86
CCDC54-201ENST00000261058 TEX47Q8TBZ9 253 aa3.42□□□□□ -1.86
CCDC54-201ENST00000261058 GLYATL2Q8WU03 294 aa3.42□□□□□ -1.86
CCDC54-201ENST00000261058 SCFD1Q8WVM8 642 aa3.42□□□□□ -1.86
CCDC54-201ENST00000261058 ASZ1Q8WWH4 475 aa3.42□□□□□ -1.86
CCDC54-201ENST00000261058 ANKRD9Q96BM1 317 aaPredicted RBP3.42□□□□□ -1.86
CCDC54-201ENST00000261058 SLC25A36Q96CQ1 311 aa3.42□□□□□ -1.86
CCDC54-201ENST00000261058 COQ2Q96H96 371 aa3.42□□□□□ -1.86
CCDC54-201ENST00000261058 C4orf36Q96KX1 117 aa3.42□□□□□ -1.86
CCDC54-201ENST00000261058 RPRD1AQ96P16 312 aaPredicted RBP3.42□□□□□ -1.86
CCDC54-201ENST00000261058 TMEM43Q9BTV4 400 aa3.42□□□□□ -1.86
CCDC54-201ENST00000261058 WRAP53Q9BUR4 548 aaKnown RBP3.42□□□□□ -1.86
CCDC54-201ENST00000261058 TRIM9Q9C026 710 aa3.42□□□□□ -1.86
CCDC54-201ENST00000261058 ALG9Q9H6U8 611 aa3.42□□□□□ -1.86
CCDC54-201ENST00000261058 MEAF6Q9HAF1 191 aa3.42□□□□□ -1.86
CCDC54-201ENST00000261058 ELL3Q9HB65 397 aaPredicted RBP3.42□□□□□ -1.86
CCDC54-201ENST00000261058 ADGRL4Q9HBW9 690 aa3.42□□□□□ -1.86
CCDC54-201ENST00000261058 TAS2R7Q9NYW3 318 aa3.42□□□□□ -1.86
CCDC54-201ENST00000261058 RCOR3Q9P2K3 495 aaPredicted RBP3.42□□□□□ -1.86
CCDC54-201ENST00000261058 STX18Q9P2W9 335 aaKnown RBP3.42□□□□□ -1.86
CCDC54-201ENST00000261058 CYTH4Q9UIA0 394 aa3.42□□□□□ -1.86
CCDC54-201ENST00000261058 KLF2Q9Y5W3 355 aaPredicted RBP3.42□□□□□ -1.86
CCDC54-201ENST00000261058 DYNC1LI1Q9Y6G9 523 aaKnown RBP3.42□□□□□ -1.86
CCDC54-201ENST00000261058 BAZ1BQ9UIG0 1483 aaKnown RBP3.41□□□□□ -1.86
CCDC54-201ENST00000261058 ABCC4O15439 1325 aa3.41□□□□□ -1.86
CCDC54-201ENST00000261058 BTBD17A6NE02 478 aa3.41□□□□□ -1.86
CCDC54-201ENST00000261058 FBLL1A6NHQ2 334 aaKnown RBP3.41□□□□□ -1.86
CCDC54-201ENST00000261058 ZNF487B1APH4 448 aa3.41□□□□□ -1.86
CCDC54-201ENST00000261058 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP3.41□□□□□ -1.86
CCDC54-201ENST00000261058 PDXKO00764 312 aa3.41□□□□□ -1.86
CCDC54-201ENST00000261058 KMOO15229 486 aa3.41□□□□□ -1.86
CCDC54-201ENST00000261058 AKR7A2O43488 359 aa3.41□□□□□ -1.86
CCDC54-201ENST00000261058 SRSF10O75494 262 aaKnown RBP3.41□□□□□ -1.86
CCDC54-201ENST00000261058 PDE5AO76074 875 aa3.41□□□□□ -1.86
CCDC54-201ENST00000261058 OR4F21O95013 312 aa3.41□□□□□ -1.86
CCDC54-201ENST00000261058 IFNA14P01570 189 aa3.41□□□□□ -1.86
CCDC54-201ENST00000261058 DBTP11182 482 aaKnown RBP3.41□□□□□ -1.86
CCDC54-201ENST00000261058 HSD17B1P14061 328 aa3.41□□□□□ -1.86
CCDC54-201ENST00000261058 ATF6P18850 670 aa3.41□□□□□ -1.86
CCDC54-201ENST00000261058 M6PRP20645 277 aa3.41□□□□□ -1.86
CCDC54-201ENST00000261058 PSMA2P25787 234 aa3.41□□□□□ -1.86
CCDC54-201ENST00000261058 ALDH3A1P30838 453 aa3.41□□□□□ -1.86
CCDC54-201ENST00000261058 RRM2P31350 389 aa3.41□□□□□ -1.86
CCDC54-201ENST00000261058 PRDX2P32119 198 aa3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms