RNA–Protein interactions for RNA: ENST00000261037.7

COL8A1-201, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL8A1, Length 5,705 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-201ENST00000261037 SIMC1Q8NDZ2 872 aa11.31□□□□□ -0.6
COL8A1-201ENST00000261037 OR4K15Q8NH41 348 aa11.31□□□□□ -0.6
COL8A1-201ENST00000261037 FRZBQ92765 325 aa11.31□□□□□ -0.6
COL8A1-201ENST00000261037 ARRDC3Q96B67 414 aa11.31□□□□□ -0.6
COL8A1-201ENST00000261037 AGAP4Q96P64 663 aa11.31□□□□□ -0.6
COL8A1-201ENST00000261037 ELOVL3Q9HB03 270 aa11.31□□□□□ -0.6
COL8A1-201ENST00000261037 TP53TG5Q9Y2B4 290 aa11.31□□□□□ -0.6
COL8A1-201ENST00000261037 SLC6A5Q9Y345 797 aa11.31□□□□□ -0.6
COL8A1-201ENST00000261037 MYH11P35749 1972 aa11.31□□□□□ -0.6
COL8A1-201ENST00000261037 H0YGG7 62 aa11.3□□□□□ -0.6
COL8A1-201ENST00000261037 PTTG1O95997 202 aa11.3□□□□□ -0.6
COL8A1-201ENST00000261037 ACPPP15309 386 aa11.3□□□□□ -0.6
COL8A1-201ENST00000261037 LTB4RQ15722 352 aa11.3□□□□□ -0.6
COL8A1-201ENST00000261037 MRPL2Q5T653 305 aaKnown RBP11.3□□□□□ -0.6
COL8A1-201ENST00000261037 PPP1R3BQ86XI6 285 aa11.3□□□□□ -0.6
COL8A1-201ENST00000261037 RBM12BQ8IXT5 1001 aaKnown RBP11.3□□□□□ -0.6
COL8A1-201ENST00000261037 ZBED3Q96IU2 234 aaPredicted RBP11.3□□□□□ -0.6
COL8A1-201ENST00000261037 HCAR1Q9BXC0 346 aa11.3□□□□□ -0.6
COL8A1-201ENST00000261037 CXCL16Q9H2A7 254 aa11.3□□□□□ -0.6
COL8A1-201ENST00000261037 ADAMTS5Q9UNA0 930 aa11.3□□□□□ -0.6
COL8A1-201ENST00000261037 NUMBLQ9Y6R0 609 aa11.3□□□□□ -0.6
COL8A1-201ENST00000261037 BTAF1O14981 1849 aa11.3□□□□□ -0.6
COL8A1-201ENST00000261037 LOC105369274A0A096LPK9 316 aa11.3□□□□□ -0.6
COL8A1-201ENST00000261037 IFNA4P05014 189 aa11.3□□□□□ -0.6
COL8A1-201ENST00000261037 ATXN1LP0C7T5 689 aaKnown RBP11.3□□□□□ -0.6
COL8A1-201ENST00000261037 MAOAP21397 527 aa11.3□□□□□ -0.6
COL8A1-201ENST00000261037 TNFSF4P23510 183 aa11.3□□□□□ -0.6
COL8A1-201ENST00000261037 TNFRSF4P43489 277 aa11.3□□□□□ -0.6
COL8A1-201ENST00000261037 HBA1P69905 142 aa11.3□□□□□ -0.6
COL8A1-201ENST00000261037 GPR18Q14330 331 aa11.3□□□□□ -0.6
COL8A1-201ENST00000261037 PGGHGQ32M88 737 aa11.3□□□□□ -0.6
COL8A1-201ENST00000261037 OR4N4Q8N0Y3 316 aa11.3□□□□□ -0.6
COL8A1-201ENST00000261037 MFSD9Q8NBP5 474 aa11.3□□□□□ -0.6
COL8A1-201ENST00000261037 RLIMQ9NVW2 624 aa11.3□□□□□ -0.6
COL8A1-201ENST00000261037 COL16A1Q07092 1604 aaPredicted RBP11.3□□□□□ -0.6
COL8A1-201ENST00000261037 MDFIC2A0A1B0GVS7 189 aa11.3□□□□□ -0.6
COL8A1-201ENST00000261037 TMEM269A0A1B0GVZ9 245 aa11.3□□□□□ -0.6
COL8A1-201ENST00000261037 PLSCR5A0PG75 271 aa11.3□□□□□ -0.6
COL8A1-201ENST00000261037 SCRG1O75711 98 aa11.3□□□□□ -0.6
COL8A1-201ENST00000261037 CER1O95813 267 aa11.3□□□□□ -0.6
COL8A1-201ENST00000261037 IL32P24001 234 aa11.3□□□□□ -0.6
COL8A1-201ENST00000261037 SLC7A9P82251 487 aa11.3□□□□□ -0.6
COL8A1-201ENST00000261037 RAB41Q5JT25 222 aa11.3□□□□□ -0.6
COL8A1-201ENST00000261037 METTL11BQ5VVY1 283 aa11.3□□□□□ -0.6
COL8A1-201ENST00000261037 BORCS7Q96B45 105 aa11.3□□□□□ -0.6
COL8A1-201ENST00000261037 COQ10AQ96MF6 247 aa11.3□□□□□ -0.6
COL8A1-201ENST00000261037 RPS10P5Q9NQ39 176 aa11.3□□□□□ -0.6
COL8A1-201ENST00000261037 SLC6A14Q9UN76 642 aa11.3□□□□□ -0.6
COL8A1-201ENST00000261037 V9GY05 133 aa11.3□□□□□ -0.6
COL8A1-201ENST00000261037 MEGF11A6BM72 1044 aa11.3□□□□□ -0.6
COL8A1-201ENST00000261037 ZNF780AO75290 641 aaPredicted RBP11.3□□□□□ -0.6
COL8A1-201ENST00000261037 GJA4P35212 333 aa11.3□□□□□ -0.6
COL8A1-201ENST00000261037 HTR3AP46098 478 aa11.3□□□□□ -0.6
COL8A1-201ENST00000261037 CLDN17P56750 224 aa11.3□□□□□ -0.6
COL8A1-201ENST00000261037 ZNF691Q5VV52 312 aa11.3□□□□□ -0.6
COL8A1-201ENST00000261037 PGBD5Q8N414 524 aa11.3□□□□□ -0.6
COL8A1-201ENST00000261037 OR5K2Q8NHB8 316 aa11.3□□□□□ -0.6
COL8A1-201ENST00000261037 GGHQ92820 318 aa11.3□□□□□ -0.6
COL8A1-201ENST00000261037 SNAPC3Q92966 411 aa11.3□□□□□ -0.6
COL8A1-201ENST00000261037 RSPRY1Q96DX4 576 aa11.3□□□□□ -0.6
COL8A1-201ENST00000261037 MALSU1Q96EH3 234 aa11.3□□□□□ -0.6
COL8A1-201ENST00000261037 OR6C1Q96RD1 312 aa11.3□□□□□ -0.6
COL8A1-201ENST00000261037 RPH3ALQ9UNE2 315 aa11.3□□□□□ -0.6
COL8A1-201ENST00000261037 AP1G1O43747 822 aa11.3□□□□□ -0.6
COL8A1-201ENST00000261037 PIP5K1CO60331 668 aa11.3□□□□□ -0.6
COL8A1-201ENST00000261037 ITGAMP11215 1152 aa11.3□□□□□ -0.6
COL8A1-201ENST00000261037 RAB4AP20338 218 aa11.3□□□□□ -0.6
COL8A1-201ENST00000261037 TAS2R31P59538 309 aa11.3□□□□□ -0.6
COL8A1-201ENST00000261037 RAB40BQ12829 278 aa11.3□□□□□ -0.6
COL8A1-201ENST00000261037 ZNF529Q6P280 563 aa11.3□□□□□ -0.6
COL8A1-201ENST00000261037 BORAQ6PGQ7 559 aa11.3□□□□□ -0.6
COL8A1-201ENST00000261037 TBPL2Q6SJ96 375 aa11.3□□□□□ -0.6
COL8A1-201ENST00000261037 ARRDC2Q8TBH0 407 aa11.3□□□□□ -0.6
COL8A1-201ENST00000261037 PAQR8Q8TEZ7 354 aa11.3□□□□□ -0.6
COL8A1-201ENST00000261037 ASB11Q8WXH4 323 aa11.3□□□□□ -0.6
COL8A1-201ENST00000261037 C22orf15Q8WYQ4 148 aa11.3□□□□□ -0.6
COL8A1-201ENST00000261037 CTRCQ99895 268 aa11.3□□□□□ -0.6
COL8A1-201ENST00000261037 DYNLRB1Q9NP97 96 aa11.3□□□□□ -0.6
COL8A1-201ENST00000261037 TMEM100Q9NV29 134 aa11.3□□□□□ -0.6
COL8A1-201ENST00000261037 SRPK3Q9UPE1 567 aa11.3□□□□□ -0.6
COL8A1-201ENST00000261037 LOC102725191A0A1B0GVB3 256 aa11.29□□□□□ -0.6
COL8A1-201ENST00000261037 IGHG1P01857 330 aa11.29□□□□□ -0.6
COL8A1-201ENST00000261037 SSTR2P30874 369 aa11.29□□□□□ -0.6
COL8A1-201ENST00000261037 CSNK1EP49674 416 aaKnown RBP11.29□□□□□ -0.6
COL8A1-201ENST00000261037 SMN1Q16637 294 aaKnown RBP11.29□□□□□ -0.6
COL8A1-201ENST00000261037 OR2G6Q5TZ20 316 aa11.29□□□□□ -0.6
COL8A1-201ENST00000261037 TANGO2Q6ICL3 276 aa11.29□□□□□ -0.6
COL8A1-201ENST00000261037 FAM43BQ6ZT52 329 aaPredicted RBP11.29□□□□□ -0.6
COL8A1-201ENST00000261037 C19orf47Q8N9M1 422 aaKnown RBP11.29□□□□□ -0.6
COL8A1-201ENST00000261037 BEST4Q8NFU0 473 aa11.29□□□□□ -0.6
COL8A1-201ENST00000261037 FNDC9Q8TBE3 224 aa11.29□□□□□ -0.6
COL8A1-201ENST00000261037 CRYGNQ8WXF5 182 aa11.29□□□□□ -0.6
COL8A1-201ENST00000261037 LMF2Q9BU23 707 aaKnown RBP11.29□□□□□ -0.6
COL8A1-201ENST00000261037 VN1R3Q9BXE9 311 aa11.29□□□□□ -0.6
COL8A1-201ENST00000261037 ZNF225Q9UK10 706 aa11.29□□□□□ -0.6
COL8A1-201ENST00000261037 SOCS6O14544 535 aa11.29□□□□□ -0.6
COL8A1-201ENST00000261037 GIFP27352 417 aa11.29□□□□□ -0.6
COL8A1-201ENST00000261037 GCAP28676 217 aa11.29□□□□□ -0.6
COL8A1-201ENST00000261037 C21orf33P30042 268 aaPredicted RBP11.29□□□□□ -0.6
COL8A1-201ENST00000261037 ERVFC1P60507 584 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 74.4 ms