RNA–Protein interactions for RNA: ENST00000260810.9

TOPBP1-201, Transcript of DNA topoisomerase II binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOPBP1, Length 5,378 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-201ENST00000260810 BTN3A2P78410 334 aa5.05□□□□□ -1.6
TOPBP1-201ENST00000260810 FOXM1Q08050 763 aa5.05□□□□□ -1.6
TOPBP1-201ENST00000260810 FGFBP1Q14512 234 aa5.05□□□□□ -1.6
TOPBP1-201ENST00000260810 NCF4Q15080 339 aa5.05□□□□□ -1.6
TOPBP1-201ENST00000260810 METAP1DQ6UB28 335 aaPredicted RBP5.05□□□□□ -1.6
TOPBP1-201ENST00000260810 SYTL1Q8IYJ3 562 aa5.05□□□□□ -1.6
TOPBP1-201ENST00000260810 OR52R1Q8NGF1 315 aa5.05□□□□□ -1.6
TOPBP1-201ENST00000260810 Q96MT0 163 aa5.05□□□□□ -1.6
TOPBP1-201ENST00000260810 RASL10BQ96S79 203 aa5.05□□□□□ -1.6
TOPBP1-201ENST00000260810 SLC35A5Q9BS91 424 aa5.05□□□□□ -1.6
TOPBP1-201ENST00000260810 EVA1AQ9H8M9 152 aa5.05□□□□□ -1.6
TOPBP1-201ENST00000260810 CTPS2Q9NRF8 586 aa5.05□□□□□ -1.6
TOPBP1-201ENST00000260810 SH3BP4Q9P0V3 963 aa5.05□□□□□ -1.6
TOPBP1-201ENST00000260810 ENTPD4Q9Y227 616 aa5.05□□□□□ -1.6
TOPBP1-201ENST00000260810 NOTCH1P46531 2555 aa5.04□□□□□ -1.6
TOPBP1-201ENST00000260810 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP5.04□□□□□ -1.62e-13■■■■■ 47.4
TOPBP1-201ENST00000260810 HYKKA2RU49 373 aa5.04□□□□□ -1.6
TOPBP1-201ENST00000260810 CACNB4O00305 520 aaPredicted RBP5.04□□□□□ -1.6
TOPBP1-201ENST00000260810 ZSCAN9O15535 394 aaPredicted RBP5.04□□□□□ -1.6
TOPBP1-201ENST00000260810 INMTO95050 263 aa5.04□□□□□ -1.6
TOPBP1-201ENST00000260810 BGLAPP02818 100 aa5.04□□□□□ -1.6
TOPBP1-201ENST00000260810 PRPS1L1P21108 318 aa5.04□□□□□ -1.6
TOPBP1-201ENST00000260810 STAT5AP42229 794 aa5.04□□□□□ -1.6
TOPBP1-201ENST00000260810 AGFG1P52594 562 aaKnown RBP5.04□□□□□ -1.6
TOPBP1-201ENST00000260810 EPHA4P54764 986 aa5.04□□□□□ -1.6
TOPBP1-201ENST00000260810 ZNF33BQ06732 778 aa5.04□□□□□ -1.6
TOPBP1-201ENST00000260810 SPCS2Q15005 226 aa5.04□□□□□ -1.6
TOPBP1-201ENST00000260810 TIMM50Q3ZCQ8 353 aa5.04□□□□□ -1.6
TOPBP1-201ENST00000260810 MED27Q6P2C8 311 aa5.04□□□□□ -1.6
TOPBP1-201ENST00000260810 PRR23CQ6ZRP0 262 aa5.04□□□□□ -1.6
TOPBP1-201ENST00000260810 EID3Q8N140 333 aa5.04□□□□□ -1.6
TOPBP1-201ENST00000260810 IFI44Q8TCB0 444 aa5.04□□□□□ -1.6
TOPBP1-201ENST00000260810 LMX1AQ8TE12 382 aa5.04□□□□□ -1.6
TOPBP1-201ENST00000260810 PSMG3-AS1Q96PY0 264 aa5.04□□□□□ -1.6
TOPBP1-201ENST00000260810 ZNF559Q9BR84 538 aa5.04□□□□□ -1.6
TOPBP1-201ENST00000260810 UGT2B28Q9BY64 529 aa5.04□□□□□ -1.6
TOPBP1-201ENST00000260810 PRPF19Q9UMS4 504 aaKnown RBP5.04□□□□□ -1.6
TOPBP1-201ENST00000260810 SNX7Q9UNH6 387 aa5.04□□□□□ -1.6
TOPBP1-201ENST00000260810 SNX6Q9UNH7 406 aa5.04□□□□□ -1.6
TOPBP1-201ENST00000260810 KIR2DS5A0A0G2JLQ3 304 aa5.04□□□□□ -1.6
TOPBP1-201ENST00000260810 A0A0G2JNG1 304 aa5.04□□□□□ -1.6
TOPBP1-201ENST00000260810 KIR2DS3K7RE56 304 aa5.04□□□□□ -1.6
TOPBP1-201ENST00000260810 CFLARO15519 480 aa5.04□□□□□ -1.6
TOPBP1-201ENST00000260810 GNSP15586 552 aa5.04□□□□□ -1.6
TOPBP1-201ENST00000260810 RAD23AP54725 363 aa5.04□□□□□ -1.6
TOPBP1-201ENST00000260810 PER3P56645 1201 aa5.04□□□□□ -1.6
TOPBP1-201ENST00000260810 GPLD1P80108 840 aa5.04□□□□□ -1.6
TOPBP1-201ENST00000260810 ALDH6A1Q02252 535 aaKnown RBP5.04□□□□□ -1.6
TOPBP1-201ENST00000260810 IRF8Q02556 426 aa5.04□□□□□ -1.6
TOPBP1-201ENST00000260810 LASP1Q14847 261 aaKnown RBP5.04□□□□□ -1.6
TOPBP1-201ENST00000260810 KIR2DS5Q14953 304 aa5.04□□□□□ -1.6
TOPBP1-201ENST00000260810 CDC73Q6P1J9 531 aa5.04□□□□□ -1.6
TOPBP1-201ENST00000260810 LRFN4Q6PJG9 635 aa5.04□□□□□ -1.6
TOPBP1-201ENST00000260810 OVCH1Q7RTY7 1134 aa5.04□□□□□ -1.6
TOPBP1-201ENST00000260810 MIER2Q8N344 545 aa5.04□□□□□ -1.6
TOPBP1-201ENST00000260810 TTLQ8NG68 377 aa5.04□□□□□ -1.6
TOPBP1-201ENST00000260810 SNIP1Q8TAD8 396 aaKnown RBP5.04□□□□□ -1.6
TOPBP1-201ENST00000260810 RNF217Q8TC41 542 aa5.04□□□□□ -1.6
TOPBP1-201ENST00000260810 SLC2A12Q8TD20 617 aa5.04□□□□□ -1.6
TOPBP1-201ENST00000260810 PIGKQ92643 395 aa5.04□□□□□ -1.6
TOPBP1-201ENST00000260810 TXNDC15Q96J42 360 aa5.04□□□□□ -1.6
TOPBP1-201ENST00000260810 ZNF514Q96K75 400 aaPredicted RBP5.04□□□□□ -1.6
TOPBP1-201ENST00000260810 ART5Q96L15 291 aa5.04□□□□□ -1.6
TOPBP1-201ENST00000260810 OPALINQ96PE5 141 aa5.04□□□□□ -1.6
TOPBP1-201ENST00000260810 FERD3LQ96RJ6 166 aa5.04□□□□□ -1.6
TOPBP1-201ENST00000260810 PIGQQ9BRB3 760 aa5.04□□□□□ -1.6
TOPBP1-201ENST00000260810 ADI1Q9BV57 179 aa5.04□□□□□ -1.6
TOPBP1-201ENST00000260810 MRPS26Q9BYN8 205 aaKnown RBP5.04□□□□□ -1.6
TOPBP1-201ENST00000260810 ADPRHL2Q9NX46 363 aa5.04□□□□□ -1.6
TOPBP1-201ENST00000260810 CALML5Q9NZT1 146 aa5.04□□□□□ -1.6
TOPBP1-201ENST00000260810 CNIH4Q9P003 139 aa5.04□□□□□ -1.6
TOPBP1-201ENST00000260810 MYCBP2O75592 4640 aa5.04□□□□□ -1.6
TOPBP1-201ENST00000260810 LRRC72A6NJI9 287 aa5.04□□□□□ -1.6
TOPBP1-201ENST00000260810 CXCR6O00574 342 aa5.04□□□□□ -1.6
TOPBP1-201ENST00000260810 PSMD4P55036 377 aaKnown RBP5.04□□□□□ -1.6
TOPBP1-201ENST00000260810 CTBP2P56545 445 aa5.04□□□□□ -1.6
TOPBP1-201ENST00000260810 SLC34A1Q06495 639 aa5.04□□□□□ -1.6
TOPBP1-201ENST00000260810 CHAF1BQ13112 559 aa5.04□□□□□ -1.6
TOPBP1-201ENST00000260810 C1orf189Q5VU69 101 aa5.04□□□□□ -1.6
TOPBP1-201ENST00000260810 C1orf146Q5VVC0 180 aa5.04□□□□□ -1.6
TOPBP1-201ENST00000260810 FIGNL1Q6PIW4 674 aa5.04□□□□□ -1.6
TOPBP1-201ENST00000260810 LIX1LQ8IVB5 337 aa5.04□□□□□ -1.6
TOPBP1-201ENST00000260810 LILRB1Q8NHL6 650 aaPredicted RBP5.04□□□□□ -1.6
TOPBP1-201ENST00000260810 ST7LQ8TDW4 575 aa5.04□□□□□ -1.6
TOPBP1-201ENST00000260810 RASSF5Q8WWW0 418 aa5.04□□□□□ -1.6
TOPBP1-201ENST00000260810 CPNE2Q96FN4 548 aaPredicted RBP5.04□□□□□ -1.6
TOPBP1-201ENST00000260810 MARCH7Q9H992 704 aa5.04□□□□□ -1.6
TOPBP1-201ENST00000260810 PRDM9Q9NQV7 894 aa5.04□□□□□ -1.6
TOPBP1-201ENST00000260810 FBXO8Q9NRD0 319 aa5.04□□□□□ -1.6
TOPBP1-201ENST00000260810 SLC6A5Q9Y345 797 aa5.04□□□□□ -1.6
TOPBP1-201ENST00000260810 COLEC10Q9Y6Z7 277 aa5.04□□□□□ -1.6
TOPBP1-201ENST00000260810 GSAPA4D1B5 854 aa5.04□□□□□ -1.6
TOPBP1-201ENST00000260810 MEN1O00255 615 aa5.04□□□□□ -1.6
TOPBP1-201ENST00000260810 AKAP8O43823 692 aaKnown RBP5.04□□□□□ -1.6
TOPBP1-201ENST00000260810 TTKP33981 857 aa5.04□□□□□ -1.6
TOPBP1-201ENST00000260810 SEPHS1P49903 392 aa5.04□□□□□ -1.6
TOPBP1-201ENST00000260810 MAPK10P53779 464 aa5.04□□□□□ -1.6
TOPBP1-201ENST00000260810 ZP1P60852 638 aa5.04□□□□□ -1.6
TOPBP1-201ENST00000260810 IL1RL1Q01638 556 aa5.04□□□□□ -1.6
TOPBP1-201ENST00000260810 DDX39BQ13838 428 aaKnown RBP5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms