RNA–Protein interactions for RNA: ENST00000260130.8

SDCBP-201, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SDCBP, Length 2,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-201ENST00000260130 C3P1Q6ZMU1 363 aa15.19■□□□□ 0.02
SDCBP-201ENST00000260130 OFCC1Q8IZS5 231 aa15.19■□□□□ 0.02
SDCBP-201ENST00000260130 EID3Q8N140 333 aa15.19■□□□□ 0.02
SDCBP-201ENST00000260130 SSC4DQ8WTU2 575 aa15.19■□□□□ 0.02
SDCBP-201ENST00000260130 OIT3Q8WWZ8 545 aa15.19■□□□□ 0.02
SDCBP-201ENST00000260130 ABTB1Q969K4 478 aaPredicted RBP15.19■□□□□ 0.02
SDCBP-201ENST00000260130 ZG16BQ96DA0 208 aa15.19■□□□□ 0.02
SDCBP-201ENST00000260130 C1GALT1C1Q96EU7 318 aa15.19■□□□□ 0.02
SDCBP-201ENST00000260130 SH3YL1Q96HL8 342 aaPredicted RBP15.19■□□□□ 0.02
SDCBP-201ENST00000260130 RNF145Q96MT1 663 aa15.19■□□□□ 0.02
SDCBP-201ENST00000260130 SEPHS2Q99611 448 aa15.19■□□□□ 0.02
SDCBP-201ENST00000260130 CHID1Q9BWS9 393 aa15.19■□□□□ 0.02
SDCBP-201ENST00000260130 UGT2B28Q9BY64 529 aa15.19■□□□□ 0.02
SDCBP-201ENST00000260130 P2RX2Q9UBL9 471 aa15.19■□□□□ 0.02
SDCBP-201ENST00000260130 RPH3AQ9Y2J0 694 aaPredicted RBP15.19■□□□□ 0.02
SDCBP-201ENST00000260130 MEMO1Q9Y316 297 aa15.19■□□□□ 0.02
SDCBP-201ENST00000260130 USP9XQ93008 2570 aaPredicted RBP15.19■□□□□ 0.02
SDCBP-201ENST00000260130 BAHCC1Q9P281 2608 aa15.18■□□□□ 0.02
SDCBP-201ENST00000260130 SH3PXD2BA1X283 911 aa15.18■□□□□ 0.02
SDCBP-201ENST00000260130 WIPF3A6NGB9 483 aa15.18■□□□□ 0.02
SDCBP-201ENST00000260130 SERINC4A6NH21 518 aa15.18■□□□□ 0.02
SDCBP-201ENST00000260130 E9PLN8 166 aa15.18■□□□□ 0.02
SDCBP-201ENST00000260130 GTPBP1O00178 669 aaKnown RBP15.18■□□□□ 0.02
SDCBP-201ENST00000260130 HCRTR2O43614 444 aa15.18■□□□□ 0.02
SDCBP-201ENST00000260130 DEAF1O75398 565 aaPredicted RBP15.18■□□□□ 0.02
SDCBP-201ENST00000260130 SNAP29O95721 258 aa15.18■□□□□ 0.02
SDCBP-201ENST00000260130 CLIC3O95833 236 aa15.18■□□□□ 0.02
SDCBP-201ENST00000260130 TFPTP0C1Z6 253 aa15.18■□□□□ 0.02
SDCBP-201ENST00000260130 HK1P19367 917 aa15.18■□□□□ 0.02
SDCBP-201ENST00000260130 GLYATQ6IB77 296 aa15.18■□□□□ 0.02
SDCBP-201ENST00000260130 ZNF585AQ6P3V2 769 aa15.18■□□□□ 0.02
SDCBP-201ENST00000260130 VKORC1Q9BQB6 163 aa15.18■□□□□ 0.02
SDCBP-201ENST00000260130 SLC38A1Q9H2H9 487 aa15.18■□□□□ 0.02
SDCBP-201ENST00000260130 MTHFD2LQ9H903 347 aaPredicted RBP15.18■□□□□ 0.02
SDCBP-201ENST00000260130 NIPSNAP3AQ9UFN0 247 aaPredicted RBP15.18■□□□□ 0.02
SDCBP-201ENST00000260130 CENPVL1A0A0U1RR11 272 aa15.18■□□□□ 0.02
SDCBP-201ENST00000260130 H3BMQ9 156 aa15.18■□□□□ 0.02
SDCBP-201ENST00000260130 GMNNO75496 209 aa15.18■□□□□ 0.02
SDCBP-201ENST00000260130 TNFRSF21O75509 655 aa15.18■□□□□ 0.02
SDCBP-201ENST00000260130 CHRM4P08173 479 aa15.18■□□□□ 0.02
SDCBP-201ENST00000260130 TCEA1P23193 301 aaKnown RBP15.18■□□□□ 0.02
SDCBP-201ENST00000260130 ADH7P40394 386 aa15.18■□□□□ 0.02
SDCBP-201ENST00000260130 GFRA1P56159 465 aa15.18■□□□□ 0.02
SDCBP-201ENST00000260130 ZNF117Q03924 483 aa15.18■□□□□ 0.02
SDCBP-201ENST00000260130 MAPK11Q15759 364 aa15.18■□□□□ 0.02
SDCBP-201ENST00000260130 MAPK14Q16539 360 aa15.18■□□□□ 0.02
SDCBP-201ENST00000260130 GLYR1Q49A26 553 aaPredicted RBP15.18■□□□□ 0.02
SDCBP-201ENST00000260130 MTFR2Q6P444 385 aa15.18■□□□□ 0.02
SDCBP-201ENST00000260130 KCTD8Q6ZWB6 473 aa15.18■□□□□ 0.02
SDCBP-201ENST00000260130 SLC38A5Q8WUX1 472 aa15.18■□□□□ 0.02
SDCBP-201ENST00000260130 PMM1Q92871 262 aa15.18■□□□□ 0.02
SDCBP-201ENST00000260130 COG8Q96MW5 612 aa15.18■□□□□ 0.02
SDCBP-201ENST00000260130 SFXN2Q96NB2 322 aa15.18■□□□□ 0.02
SDCBP-201ENST00000260130 DCUN1D5Q9BTE7 237 aa15.18■□□□□ 0.02
SDCBP-201ENST00000260130 ALKBH4Q9NXW9 302 aa15.18■□□□□ 0.02
SDCBP-201ENST00000260130 CARD8Q9Y2G2 431 aa15.18■□□□□ 0.02
SDCBP-201ENST00000260130 TMEM247A6NEH6 219 aa15.17■□□□□ 0.02
SDCBP-201ENST00000260130 FIGNL2A6NMB9 653 aa15.17■□□□□ 0.02
SDCBP-201ENST00000260130 EVPLLA8MZ36 301 aa15.17■□□□□ 0.02
SDCBP-201ENST00000260130 ENTPD1P49961 510 aa15.17■□□□□ 0.02
SDCBP-201ENST00000260130 FAM98BQ52LJ0 330 aaKnown RBP15.17■□□□□ 0.02
SDCBP-201ENST00000260130 RUNDC3AQ59EK9 446 aa15.17■□□□□ 0.02
SDCBP-201ENST00000260130 GPR107Q5VW38 600 aa15.17■□□□□ 0.02
SDCBP-201ENST00000260130 CBLN3Q6UW01 205 aa15.17■□□□□ 0.02
SDCBP-201ENST00000260130 ARSKQ6UWY0 536 aa15.17■□□□□ 0.02
SDCBP-201ENST00000260130 CCDC120Q96HB5 630 aa15.17■□□□□ 0.02
SDCBP-201ENST00000260130 RUBCNLQ9H714 662 aa15.17■□□□□ 0.02
SDCBP-201ENST00000260130 TBCCD1Q9NVR7 557 aa15.17■□□□□ 0.02
SDCBP-201ENST00000260130 CALML5Q9NZT1 146 aa15.17■□□□□ 0.02
SDCBP-201ENST00000260130 CORO2BQ9UQ03 480 aa15.17■□□□□ 0.02
SDCBP-201ENST00000260130 LRRK2Q5S007 2527 aa15.17■□□□□ 0.02
SDCBP-201ENST00000260130 DNAJC13O75165 2243 aa15.17■□□□□ 0.02
SDCBP-201ENST00000260130 GTF3C1Q12789 2109 aa15.17■□□□□ 0.02
SDCBP-201ENST00000260130 ZNF264O43296 627 aa15.17■□□□□ 0.02
SDCBP-201ENST00000260130 WDR1O75083 606 aa15.17■□□□□ 0.02
SDCBP-201ENST00000260130 BCHEP06276 602 aa15.17■□□□□ 0.02
SDCBP-201ENST00000260130 NUDT7P0C024 238 aa15.17■□□□□ 0.02
SDCBP-201ENST00000260130 RAP2AP10114 183 aa15.17■□□□□ 0.02
SDCBP-201ENST00000260130 UBL4AP11441 157 aa15.17■□□□□ 0.02
SDCBP-201ENST00000260130 GPX2P18283 190 aa15.17■□□□□ 0.02
SDCBP-201ENST00000260130 CHMP24386 653 aa15.17■□□□□ 0.02
SDCBP-201ENST00000260130 ACVR2AP27037 513 aa15.17■□□□□ 0.02
SDCBP-201ENST00000260130 P2RX1P51575 399 aa15.17■□□□□ 0.02
SDCBP-201ENST00000260130 ALDH3A2P51648 485 aa15.17■□□□□ 0.02
SDCBP-201ENST00000260130 CRISP3P54108 245 aa15.17■□□□□ 0.02
SDCBP-201ENST00000260130 B3GALT5-AS1P59052 145 aa15.17■□□□□ 0.02
SDCBP-201ENST00000260130 GNA13Q14344 377 aa15.17■□□□□ 0.02
SDCBP-201ENST00000260130 RAET1LQ5VY80 246 aa15.17■□□□□ 0.02
SDCBP-201ENST00000260130 ENPP6Q6UWR7 440 aa15.17■□□□□ 0.02
SDCBP-201ENST00000260130 EIF3MQ7L2H7 374 aaKnown RBP15.17■□□□□ 0.02
SDCBP-201ENST00000260130 PM20D2Q8IYS1 436 aa15.17■□□□□ 0.02
SDCBP-201ENST00000260130 CGREF1Q99674 301 aa15.17■□□□□ 0.02
SDCBP-201ENST00000260130 PRDM14Q9GZV8 571 aa15.17■□□□□ 0.02
SDCBP-201ENST00000260130 QRSL1Q9H0R6 528 aaKnown RBP15.17■□□□□ 0.02
SDCBP-201ENST00000260130 IKZF5Q9H5V7 419 aa15.17■□□□□ 0.02
SDCBP-201ENST00000260130 RHBDL2Q9NX52 303 aa15.17■□□□□ 0.02
SDCBP-201ENST00000260130 ICAM5Q9UMF0 924 aa15.17■□□□□ 0.02
SDCBP-201ENST00000260130 VDAC3Q9Y277 283 aa15.17■□□□□ 0.02
SDCBP-201ENST00000260130 A0A087WZY1 265 aa15.16■□□□□ 0.02
SDCBP-201ENST00000260130 OIP5O43482 229 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms