RNA–Protein interactions for RNA: ENST00000254480.9

SMARCC1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCC1, Length 6,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-201ENST00000254480 GCM1Q9NP62 436 aa17.44■□□□□ 0.38
SMARCC1-201ENST00000254480 TESQ9UGI8 421 aaKnown RBP17.44■□□□□ 0.38
SMARCC1-201ENST00000254480 CACNG2Q9Y698 323 aa17.44■□□□□ 0.38
SMARCC1-201ENST00000254480 INHBCP55103 352 aa17.44■□□□□ 0.38
SMARCC1-201ENST00000254480 BCDIN3DQ7Z5W3 292 aaKnown RBP17.44■□□□□ 0.38
SMARCC1-201ENST00000254480 CCDC28AQ8IWP9 274 aa17.44■□□□□ 0.38
SMARCC1-201ENST00000254480 CCDC32Q9BV29 185 aa17.44■□□□□ 0.38
SMARCC1-201ENST00000254480 DUSP23Q9BVJ7 150 aa17.44■□□□□ 0.38
SMARCC1-201ENST00000254480 PCDHB10Q9UN67 800 aa17.44■□□□□ 0.38
SMARCC1-201ENST00000254480 HEMK1Q9Y5R4 338 aaPredicted RBP17.44■□□□□ 0.38
SMARCC1-201ENST00000254480 PLSCR5A0PG75 271 aa17.44■□□□□ 0.38
SMARCC1-201ENST00000254480 SERPINE2P07093 398 aa17.44■□□□□ 0.38
SMARCC1-201ENST00000254480 OR8G3PP0DMU2 310 aa17.44■□□□□ 0.38
SMARCC1-201ENST00000254480 TDGQ13569 410 aa17.44■□□□□ 0.38
SMARCC1-201ENST00000254480 GPR18Q14330 331 aa17.44■□□□□ 0.38
SMARCC1-201ENST00000254480 NDUFAF7Q7L592 441 aa17.44■□□□□ 0.38
SMARCC1-201ENST00000254480 GTPBP8Q8N3Z3 284 aaPredicted RBP17.44■□□□□ 0.38
SMARCC1-201ENST00000254480 OR5D18Q8NGL1 313 aa17.44■□□□□ 0.38
SMARCC1-201ENST00000254480 NT5C3BQ969T7 300 aa17.44■□□□□ 0.38
SMARCC1-201ENST00000254480 SULT4A1Q9BR01 284 aa17.44■□□□□ 0.38
SMARCC1-201ENST00000254480 C5P01031 1676 aa17.44■□□□□ 0.38
SMARCC1-201ENST00000254480 SIRPAP78324 504 aa17.44■□□□□ 0.38
SMARCC1-201ENST00000254480 LSAMPQ13449 338 aa17.44■□□□□ 0.38
SMARCC1-201ENST00000254480 MELKQ14680 651 aa17.44■□□□□ 0.38
SMARCC1-201ENST00000254480 AKR1C8PQ5T2L2 129 aa17.44■□□□□ 0.38
SMARCC1-201ENST00000254480 WBP2NLQ6ICG8 309 aa17.44■□□□□ 0.38
SMARCC1-201ENST00000254480 ZNF576Q9H609 170 aa17.44■□□□□ 0.38
SMARCC1-201ENST00000254480 FOLH1BQ9HBA9 442 aa17.44■□□□□ 0.38
SMARCC1-201ENST00000254480 TAS2R8Q9NYW2 309 aa17.44■□□□□ 0.38
SMARCC1-201ENST00000254480 PIP5K1CO60331 668 aa17.44■□□□□ 0.38
SMARCC1-201ENST00000254480 CLDN17P56750 224 aa17.44■□□□□ 0.38
SMARCC1-201ENST00000254480 PGGHGQ32M88 737 aa17.44■□□□□ 0.38
SMARCC1-201ENST00000254480 EXOSC6Q5RKV6 272 aaKnown RBP17.44■□□□□ 0.38
SMARCC1-201ENST00000254480 GARNL3Q5VVW2 1013 aa17.44■□□□□ 0.38
SMARCC1-201ENST00000254480 TMEM53Q6P2H8 277 aa17.44■□□□□ 0.38
SMARCC1-201ENST00000254480 OR56B2PQ8NGI1 322 aa17.44■□□□□ 0.38
SMARCC1-201ENST00000254480 PHOSPHO2Q8TCD6 241 aa17.44■□□□□ 0.38
SMARCC1-201ENST00000254480 ZNF681Q96N22 645 aa17.44■□□□□ 0.38
SMARCC1-201ENST00000254480 OR5B12Q96R08 314 aa17.44■□□□□ 0.38
SMARCC1-201ENST00000254480 SUSD5O60279 629 aa17.43■□□□□ 0.38
SMARCC1-201ENST00000254480 CER1O95813 267 aa17.43■□□□□ 0.38
SMARCC1-201ENST00000254480 CDK1P06493 297 aa17.43■□□□□ 0.38
SMARCC1-201ENST00000254480 PTCRAQ6ISU1 281 aaPredicted RBP17.43■□□□□ 0.38
SMARCC1-201ENST00000254480 MEPCEQ7L2J0 689 aaKnown RBP17.43■□□□□ 0.38
SMARCC1-201ENST00000254480 CPOXP36551 454 aa17.43■□□□□ 0.38
SMARCC1-201ENST00000254480 COX20Q5RI15 118 aa17.43■□□□□ 0.38
SMARCC1-201ENST00000254480 CBLL1Q75N03 491 aa17.43■□□□□ 0.38
SMARCC1-201ENST00000254480 SPNS2Q8IVW8 549 aa17.43■□□□□ 0.38
SMARCC1-201ENST00000254480 SGPP2Q8IWX5 399 aa17.43■□□□□ 0.38
SMARCC1-201ENST00000254480 MMP21Q8N119 569 aa17.43■□□□□ 0.38
SMARCC1-201ENST00000254480 OR5D14Q8NGL3 314 aa17.43■□□□□ 0.38
SMARCC1-201ENST00000254480 HHIPL1Q96JK4 782 aa17.43■□□□□ 0.38
SMARCC1-201ENST00000254480 MICU1Q9BPX6 476 aa17.43■□□□□ 0.38
SMARCC1-201ENST00000254480 HCAR1Q9BXC0 346 aa17.43■□□□□ 0.38
SMARCC1-201ENST00000254480 OLAHQ9NV23 265 aa17.43■□□□□ 0.38
SMARCC1-201ENST00000254480 ZNF254O75437 659 aa17.43■□□□□ 0.38
SMARCC1-201ENST00000254480 MAOAP21397 527 aa17.43■□□□□ 0.38
SMARCC1-201ENST00000254480 SLC22A10Q63ZE4 541 aa17.43■□□□□ 0.38
SMARCC1-201ENST00000254480 FBXW12Q6X9E4 464 aa17.43■□□□□ 0.38
SMARCC1-201ENST00000254480 NCCRP1Q6ZVX7 275 aaPredicted RBP17.43■□□□□ 0.38
SMARCC1-201ENST00000254480 CMTM1Q8IZ96 169 aa17.43■□□□□ 0.38
SMARCC1-201ENST00000254480 ZNF610Q8N9Z0 462 aa17.43■□□□□ 0.38
SMARCC1-201ENST00000254480 IGHV3-20A0A0C4DH32 117 aa17.43■□□□□ 0.38
SMARCC1-201ENST00000254480 COMMD7Q86VX2 200 aa17.43■□□□□ 0.38
SMARCC1-201ENST00000254480 ZNF417Q8TAU3 575 aa17.43■□□□□ 0.38
SMARCC1-201ENST00000254480 TUBB1Q9H4B7 451 aa17.43■□□□□ 0.38
SMARCC1-201ENST00000254480 LRFN1Q9P244 771 aa17.43■□□□□ 0.38
SMARCC1-201ENST00000254480 SC5DO75845 299 aa17.43■□□□□ 0.38
SMARCC1-201ENST00000254480 GPR149Q86SP6 731 aa17.43■□□□□ 0.38
SMARCC1-201ENST00000254480 CLEC14AQ86T13 490 aa17.43■□□□□ 0.38
SMARCC1-201ENST00000254480 CNTN4Q8IWV2 1026 aa17.43■□□□□ 0.38
SMARCC1-201ENST00000254480 VN1R3Q9BXE9 311 aa17.43■□□□□ 0.38
SMARCC1-201ENST00000254480 KLHL13Q9P2N7 655 aa17.43■□□□□ 0.38
SMARCC1-201ENST00000254480 ACOD1A6NK06 481 aa17.42■□□□□ 0.38
SMARCC1-201ENST00000254480 F5H5P2 479 aa17.42■□□□□ 0.38
SMARCC1-201ENST00000254480 K7ESM1 405 aa17.42■□□□□ 0.38
SMARCC1-201ENST00000254480 ERVK-16P61578 105 aa17.42■□□□□ 0.38
SMARCC1-201ENST00000254480 GGHQ92820 318 aa17.42■□□□□ 0.38
SMARCC1-201ENST00000254480 KATNB1Q9BVA0 655 aa17.42■□□□□ 0.38
SMARCC1-201ENST00000254480 NRSN2Q9GZP1 204 aa17.42■□□□□ 0.38
SMARCC1-201ENST00000254480 EDIL3O43854 480 aa17.42■□□□□ 0.38
SMARCC1-201ENST00000254480 TACR3P29371 465 aa17.42■□□□□ 0.38
SMARCC1-201ENST00000254480 MFSD9Q8NBP5 474 aa17.42■□□□□ 0.38
SMARCC1-201ENST00000254480 OR5M1Q8NGP8 315 aa17.42■□□□□ 0.38
SMARCC1-201ENST00000254480 OR4K15Q8NH41 348 aa17.42■□□□□ 0.38
SMARCC1-201ENST00000254480 TMEM163Q8TC26 289 aa17.42■□□□□ 0.38
SMARCC1-201ENST00000254480 STK35Q8TDR2 534 aa17.42■□□□□ 0.38
SMARCC1-201ENST00000254480 CALHM2Q9HA72 323 aa17.42■□□□□ 0.38
SMARCC1-201ENST00000254480 ENPP5Q9UJA9 477 aa17.42■□□□□ 0.38
SMARCC1-201ENST00000254480 AP1M2Q9Y6Q5 423 aa17.42■□□□□ 0.38
SMARCC1-201ENST00000254480 CNTRLQ7Z7A1 2325 aa17.42■□□□□ 0.38
SMARCC1-201ENST00000254480 F11P03951 625 aa17.42■□□□□ 0.38
SMARCC1-201ENST00000254480 CDK2P24941 298 aa17.42■□□□□ 0.38
SMARCC1-201ENST00000254480 PDZD9Q8IXQ8 264 aa17.42■□□□□ 0.38
SMARCC1-201ENST00000254480 FAM160A2Q8N612 972 aaPredicted RBP17.42■□□□□ 0.38
SMARCC1-201ENST00000254480 SLC38A5Q8WUX1 472 aa17.42■□□□□ 0.38
SMARCC1-201ENST00000254480 NAA50Q9GZZ1 169 aaKnown RBP17.42■□□□□ 0.38
SMARCC1-201ENST00000254480 H0Y8X5 98 aa17.42■□□□□ 0.38
SMARCC1-201ENST00000254480 GIFP27352 417 aa17.42■□□□□ 0.38
SMARCC1-201ENST00000254480 POLR2HP52434 150 aaKnown RBP17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms