RNA–Protein interactions for RNA: ENST00000248668.4

LRFN1-201, Transcript of leucine rich repeat and fibronectin type III domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRFN1, Length 3,381 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1-201ENST00000248668 NIPAL3Q6P499 406 aa14.53□□□□□ -0.08
LRFN1-201ENST00000248668 C16orf52Q8NHV5 167 aa14.53□□□□□ -0.08
LRFN1-201ENST00000248668 PTP4A1Q93096 173 aa14.53□□□□□ -0.08
LRFN1-201ENST00000248668 MIXL1Q9H2W2 232 aa14.53□□□□□ -0.08
LRFN1-201ENST00000248668 DNAJB12Q9NXW2 375 aaKnown RBP14.53□□□□□ -0.08
LRFN1-201ENST00000248668 PRKACAP17612 351 aa14.53□□□□□ -0.08
LRFN1-201ENST00000248668 OR1D4P47884 311 aa14.53□□□□□ -0.08
LRFN1-201ENST00000248668 MANEAQ5SRI9 462 aa14.53□□□□□ -0.08
LRFN1-201ENST00000248668 QSOX2Q6ZRP7 698 aa14.53□□□□□ -0.08
LRFN1-201ENST00000248668 ZDHHC19Q8WVZ1 309 aaPredicted RBP14.53□□□□□ -0.08
LRFN1-201ENST00000248668 ZNF649Q9BS31 505 aa14.53□□□□□ -0.08
LRFN1-201ENST00000248668 TTYH1Q9H313 450 aaPredicted RBP14.53□□□□□ -0.08
LRFN1-201ENST00000248668 ASCC3Q8N3C0 2202 aaKnown RBP14.52□□□□□ -0.08
LRFN1-201ENST00000248668 IRGMA1A4Y4 181 aa14.52□□□□□ -0.08
LRFN1-201ENST00000248668 TFECO14948 347 aaPredicted RBP14.52□□□□□ -0.08
LRFN1-201ENST00000248668 ATF4P18848 351 aaPredicted RBP14.52□□□□□ -0.08
LRFN1-201ENST00000248668 GABRA5P31644 462 aa14.52□□□□□ -0.08
LRFN1-201ENST00000248668 CAPZBP47756 277 aa14.52□□□□□ -0.08
LRFN1-201ENST00000248668 PRTGQ2VWP7 1150 aa14.52□□□□□ -0.08
LRFN1-201ENST00000248668 EXOSC6Q5RKV6 272 aaKnown RBP14.52□□□□□ -0.08
LRFN1-201ENST00000248668 ZNF322Q6U7Q0 402 aaPredicted RBP14.52□□□□□ -0.08
LRFN1-201ENST00000248668 KIRREL2Q6UWL6 708 aa14.52□□□□□ -0.08
LRFN1-201ENST00000248668 RPTNQ6XPR3 784 aa14.52□□□□□ -0.08
LRFN1-201ENST00000248668 NRARPQ7Z6K4 114 aa14.52□□□□□ -0.08
LRFN1-201ENST00000248668 ZNF321PQ8N8H1 164 aa14.52□□□□□ -0.08
LRFN1-201ENST00000248668 ZNF485Q8NCK3 441 aa14.52□□□□□ -0.08
LRFN1-201ENST00000248668 BRIX1Q8TDN6 353 aaKnown RBP14.52□□□□□ -0.08
LRFN1-201ENST00000248668 MAP6Q96JE9 813 aa14.52□□□□□ -0.08
LRFN1-201ENST00000248668 ALG8Q9BVK2 526 aa14.52□□□□□ -0.08
LRFN1-201ENST00000248668 BEX2Q9BXY8 128 aa14.52□□□□□ -0.08
LRFN1-201ENST00000248668 TBC1D24Q9ULP9 559 aa14.52□□□□□ -0.08
LRFN1-201ENST00000248668 GSTK1Q9Y2Q3 226 aa14.52□□□□□ -0.08
LRFN1-201ENST00000248668 MPDZO75970 2070 aa14.52□□□□□ -0.09
LRFN1-201ENST00000248668 THADAQ6YHU6 1953 aa14.52□□□□□ -0.09
LRFN1-201ENST00000248668 DMDP11532 3685 aa14.52□□□□□ -0.09
LRFN1-201ENST00000248668 DAPL1A0PJW8 107 aa14.52□□□□□ -0.09
LRFN1-201ENST00000248668 PRR23D1E9PI22 279 aaPredicted RBP14.52□□□□□ -0.09
LRFN1-201ENST00000248668 GABRPO00591 440 aa14.52□□□□□ -0.09
LRFN1-201ENST00000248668 IMPA2O14732 288 aa14.52□□□□□ -0.09
LRFN1-201ENST00000248668 PRR23D2P0DMB1 279 aaPredicted RBP14.52□□□□□ -0.09
LRFN1-201ENST00000248668 CD38P28907 300 aa14.52□□□□□ -0.09
LRFN1-201ENST00000248668 DEFA1P59665 94 aa14.52□□□□□ -0.09
LRFN1-201ENST00000248668 DEFA3P59666 94 aa14.52□□□□□ -0.09
LRFN1-201ENST00000248668 FAM27D1Q5T7N8 215 aa14.52□□□□□ -0.09
LRFN1-201ENST00000248668 PRPF38BQ5VTL8 546 aaKnown RBP14.52□□□□□ -0.09
LRFN1-201ENST00000248668 ARL9Q6T311 187 aa14.52□□□□□ -0.09
LRFN1-201ENST00000248668 SYT13Q7L8C5 426 aa14.52□□□□□ -0.09
LRFN1-201ENST00000248668 ARHGEF39Q8N4T4 335 aa14.52□□□□□ -0.09
LRFN1-201ENST00000248668 SDR9C7Q8NEX9 313 aa14.52□□□□□ -0.09
LRFN1-201ENST00000248668 NEIL3Q8TAT5 605 aa14.52□□□□□ -0.09
LRFN1-201ENST00000248668 VSTM2LQ96N03 204 aa14.52□□□□□ -0.09
LRFN1-201ENST00000248668 OR2B2Q9GZK3 357 aa14.52□□□□□ -0.09
LRFN1-201ENST00000248668 FN3KQ9H479 309 aa14.52□□□□□ -0.09
LRFN1-201ENST00000248668 PNO1Q9NRX1 252 aaKnown RBP14.52□□□□□ -0.09
LRFN1-201ENST00000248668 A0A0B4J2E0 115 aa14.51□□□□□ -0.09
LRFN1-201ENST00000248668 A0A1B0GX12 115 aa14.51□□□□□ -0.09
LRFN1-201ENST00000248668 A0A1W2PQ09 198 aa14.51□□□□□ -0.09
LRFN1-201ENST00000248668 E9PI62 339 aa14.51□□□□□ -0.09
LRFN1-201ENST00000248668 AKAP8O43823 692 aaKnown RBP14.51□□□□□ -0.09
LRFN1-201ENST00000248668 IL1AP01583 271 aa14.51□□□□□ -0.09
LRFN1-201ENST00000248668 COL4A2P08572 1712 aa14.51□□□□□ -0.09
LRFN1-201ENST00000248668 IL9P15248 144 aa14.51□□□□□ -0.09
LRFN1-201ENST00000248668 ACAA2P42765 397 aaKnown RBP14.51□□□□□ -0.09
LRFN1-201ENST00000248668 GPLD1P80108 840 aa14.51□□□□□ -0.09
LRFN1-201ENST00000248668 ARMC4Q5T2S8 1044 aa14.51□□□□□ -0.09
LRFN1-201ENST00000248668 MEPCEQ7L2J0 689 aaKnown RBP14.51□□□□□ -0.09
LRFN1-201ENST00000248668 ACBD7Q8N6N7 88 aa14.51□□□□□ -0.09
LRFN1-201ENST00000248668 GALNT6Q8NCL4 622 aa14.51□□□□□ -0.09
LRFN1-201ENST00000248668 OR4K13Q8NH42 304 aa14.51□□□□□ -0.09
LRFN1-201ENST00000248668 CCDC86Q9H6F5 360 aaKnown RBP14.51□□□□□ -0.09
LRFN1-201ENST00000248668 SP140LQ9H930 580 aa14.51□□□□□ -0.09
LRFN1-201ENST00000248668 MRPS33Q9Y291 106 aaKnown RBP14.51□□□□□ -0.09
LRFN1-201ENST00000248668 FAM86C2PA6NEL3 165 aa14.51□□□□□ -0.09
LRFN1-201ENST00000248668 FABP12A6NFH5 140 aa14.51□□□□□ -0.09
LRFN1-201ENST00000248668 RCBTB2O95199 551 aa14.51□□□□□ -0.09
LRFN1-201ENST00000248668 PTGS2P35354 604 aa14.51□□□□□ -0.09
LRFN1-201ENST00000248668 CSNK1EP49674 416 aaKnown RBP14.51□□□□□ -0.09
LRFN1-201ENST00000248668 ELOCQ15369 112 aa14.51□□□□□ -0.09
LRFN1-201ENST00000248668 ZFP69Q49AA0 526 aa14.51□□□□□ -0.09
LRFN1-201ENST00000248668 ZCCHC12Q6PEW1 402 aa14.51□□□□□ -0.09
LRFN1-201ENST00000248668 TTLL10Q6ZVT0 673 aa14.51□□□□□ -0.09
LRFN1-201ENST00000248668 OR51Q1Q8NH59 317 aa14.51□□□□□ -0.09
LRFN1-201ENST00000248668 OR4C6Q8NH72 309 aa14.51□□□□□ -0.09
LRFN1-201ENST00000248668 ZNF559Q9BR84 538 aa14.51□□□□□ -0.09
LRFN1-201ENST00000248668 DHCR7Q9UBM7 475 aaKnown RBP14.51□□□□□ -0.09
LRFN1-201ENST00000248668 RPS6KB2Q9UBS0 482 aa14.51□□□□□ -0.09
LRFN1-201ENST00000248668 ADAM18Q9Y3Q7 739 aa14.51□□□□□ -0.09
LRFN1-201ENST00000248668 STK25O00506 426 aa14.51□□□□□ -0.09
LRFN1-201ENST00000248668 CLDN4O14493 209 aa14.51□□□□□ -0.09
LRFN1-201ENST00000248668 MBTPS2O43462 519 aa14.51□□□□□ -0.09
LRFN1-201ENST00000248668 APOA1P02647 267 aa14.51□□□□□ -0.09
LRFN1-201ENST00000248668 DRD5P21918 477 aa14.51□□□□□ -0.09
LRFN1-201ENST00000248668 FOXL2P58012 376 aa14.51□□□□□ -0.09
LRFN1-201ENST00000248668 RPL6Q02878 288 aaKnown RBP14.51□□□□□ -0.09
LRFN1-201ENST00000248668 SLC3A1Q07837 685 aa14.51□□□□□ -0.09
LRFN1-201ENST00000248668 FZD5Q13467 585 aa14.51□□□□□ -0.09
LRFN1-201ENST00000248668 GARNL3Q5VVW2 1013 aa14.51□□□□□ -0.09
LRFN1-201ENST00000248668 RFLNBQ8N5W9 214 aa14.51□□□□□ -0.09
LRFN1-201ENST00000248668 ERMAPQ96PL5 475 aaPredicted RBP14.51□□□□□ -0.09
LRFN1-201ENST00000248668 OR10A5Q9H207 317 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms