RNA–Protein interactions for RNA: ENST00000233027.9

NEK4-201, Transcript of NIMA related kinase 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEK4, Length 6,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-201ENST00000233027 PAPOLGQ9BWT3 736 aaKnown RBP12.51□□□□□ -0.41
NEK4-201ENST00000233027 ELOVL3Q9HB03 270 aa12.51□□□□□ -0.41
NEK4-201ENST00000233027 A6NCN8 305 aa12.5□□□□□ -0.41
NEK4-201ENST00000233027 ACOD1A6NK06 481 aa12.5□□□□□ -0.41
NEK4-201ENST00000233027 IFNA4P05014 189 aa12.5□□□□□ -0.41
NEK4-201ENST00000233027 SBSNQ6UWP8 590 aa12.5□□□□□ -0.41
NEK4-201ENST00000233027 COX15Q7KZN9 410 aa12.5□□□□□ -0.41
NEK4-201ENST00000233027 OR5D14Q8NGL3 314 aa12.5□□□□□ -0.41
NEK4-201ENST00000233027 OR51Q1Q8NH59 317 aa12.5□□□□□ -0.41
NEK4-201ENST00000233027 LILRB4Q8NHJ6 448 aa12.5□□□□□ -0.41
NEK4-201ENST00000233027 UBXN10Q96LJ8 280 aa12.5□□□□□ -0.41
NEK4-201ENST00000233027 PRRT1Q99946 306 aa12.5□□□□□ -0.41
NEK4-201ENST00000233027 MKRN2Q9H000 416 aaKnown RBP12.5□□□□□ -0.41
NEK4-201ENST00000233027 ADAM18Q9Y3Q7 739 aa12.5□□□□□ -0.41
NEK4-201ENST00000233027 USP3Q9Y6I4 520 aa12.5□□□□□ -0.41
NEK4-201ENST00000233027 RGPD5Q99666 1765 aa12.5□□□□□ -0.41
NEK4-201ENST00000233027 OR6C6A6NF89 314 aa12.5□□□□□ -0.41
NEK4-201ENST00000233027 DBHP09172 617 aa12.5□□□□□ -0.41
NEK4-201ENST00000233027 IRF2P14316 349 aa12.5□□□□□ -0.41
NEK4-201ENST00000233027 GPR18Q14330 331 aa12.5□□□□□ -0.41
NEK4-201ENST00000233027 GLB1L2Q8IW92 636 aa12.5□□□□□ -0.41
NEK4-201ENST00000233027 SLC46A2Q9BY10 475 aa12.5□□□□□ -0.41
NEK4-201ENST00000233027 NRXN3Q9Y4C0 1643 aa12.5□□□□□ -0.41
NEK4-201ENST00000233027 PRSS38A1L453 326 aa12.5□□□□□ -0.41
NEK4-201ENST00000233027 ZBTB42B2RXF5 422 aa12.5□□□□□ -0.41
NEK4-201ENST00000233027 ARAFP10398 606 aa12.5□□□□□ -0.41
NEK4-201ENST00000233027 TGM4P49221 684 aa12.5□□□□□ -0.41
NEK4-201ENST00000233027 GALEQ14376 348 aa12.5□□□□□ -0.41
NEK4-201ENST00000233027 METAP1DQ6UB28 335 aaPredicted RBP12.5□□□□□ -0.41
NEK4-201ENST00000233027 OR7G1Q8NGA0 311 aa12.5□□□□□ -0.41
NEK4-201ENST00000233027 TRMT2BQ96GJ1 504 aaKnown RBP12.5□□□□□ -0.41
NEK4-201ENST00000233027 ZNF582Q96NG8 517 aaPredicted RBP12.5□□□□□ -0.41
NEK4-201ENST00000233027 ABRACLQ9P1F3 81 aa12.5□□□□□ -0.41
NEK4-201ENST00000233027 PSORS1C1Q9UIG5 152 aa12.5□□□□□ -0.41
NEK4-201ENST00000233027 LAMB4A4D0S4 1761 aa12.5□□□□□ -0.41
NEK4-201ENST00000233027 ADAM12O43184 909 aa12.5□□□□□ -0.41
NEK4-201ENST00000233027 TNK1Q13470 666 aa12.5□□□□□ -0.41
NEK4-201ENST00000233027 HTR3DQ70Z44 454 aa12.5□□□□□ -0.41
NEK4-201ENST00000233027 CMTM1Q8IZ96 169 aa12.5□□□□□ -0.41
NEK4-201ENST00000233027 ISG20Q96AZ6 181 aaKnown RBP12.5□□□□□ -0.41
NEK4-201ENST00000233027 FOXRED1Q96CU9 486 aaPredicted RBP12.5□□□□□ -0.41
NEK4-201ENST00000233027 OR5M11Q96RB7 305 aa12.5□□□□□ -0.41
NEK4-201ENST00000233027 BTBD2Q9BX70 525 aa12.5□□□□□ -0.41
NEK4-201ENST00000233027 B3GNT2Q9NY97 397 aa12.5□□□□□ -0.41
NEK4-201ENST00000233027 PLEK2Q9NYT0 353 aa12.5□□□□□ -0.41
NEK4-201ENST00000233027 ZNF223Q9UK11 482 aaPredicted RBP12.5□□□□□ -0.41
NEK4-201ENST00000233027 SLC35A3Q9Y2D2 325 aa12.5□□□□□ -0.41
NEK4-201ENST00000233027 SHOXO15266 292 aa12.5□□□□□ -0.41
NEK4-201ENST00000233027 GABRA5P31644 462 aa12.5□□□□□ -0.41
NEK4-201ENST00000233027 PIGAP37287 484 aa12.5□□□□□ -0.41
NEK4-201ENST00000233027 BCL2A1Q16548 175 aa12.5□□□□□ -0.41
NEK4-201ENST00000233027 MRPL21Q7Z2W9 205 aaKnown RBP12.5□□□□□ -0.41
NEK4-201ENST00000233027 LIX1LQ8IVB5 337 aa12.5□□□□□ -0.41
NEK4-201ENST00000233027 SLC38A5Q8WUX1 472 aa12.5□□□□□ -0.41
NEK4-201ENST00000233027 ZNF705FA8MVS1 300 aaPredicted RBP12.49□□□□□ -0.41
NEK4-201ENST00000233027 SSX4O60224 188 aa12.49□□□□□ -0.41
NEK4-201ENST00000233027 ADAMTS4O75173 837 aa12.49□□□□□ -0.41
NEK4-201ENST00000233027 ZNF705DP0CH99 300 aaPredicted RBP12.49□□□□□ -0.41
NEK4-201ENST00000233027 ZNF705BP0CI00 300 aaPredicted RBP12.49□□□□□ -0.41
NEK4-201ENST00000233027 CPMP14384 443 aa12.49□□□□□ -0.41
NEK4-201ENST00000233027 PXNP49023 591 aaPredicted RBP12.49□□□□□ -0.41
NEK4-201ENST00000233027 MAT1AQ00266 395 aaKnown RBP12.49□□□□□ -0.41
NEK4-201ENST00000233027 MCATQ8IVS2 390 aaKnown RBP12.49□□□□□ -0.41
NEK4-201ENST00000233027 NUDT8Q8WV74 236 aa12.49□□□□□ -0.41
NEK4-201ENST00000233027 UBR2Q8IWV8 1755 aa12.49□□□□□ -0.41
NEK4-201ENST00000233027 ARPC4-TTLL3A0A0A6YYG9 625 aa12.49□□□□□ -0.41
NEK4-201ENST00000233027 SULT2B1O00204 365 aa12.49□□□□□ -0.41
NEK4-201ENST00000233027 ANKRD28O15084 1053 aa12.49□□□□□ -0.41
NEK4-201ENST00000233027 EDIL3O43854 480 aa12.49□□□□□ -0.41
NEK4-201ENST00000233027 M6PRP20645 277 aa12.49□□□□□ -0.41
NEK4-201ENST00000233027 CLDN6P56747 220 aa12.49□□□□□ -0.41
NEK4-201ENST00000233027 MEF2DQ14814 521 aa12.49□□□□□ -0.41
NEK4-201ENST00000233027 ZNF546Q86UE3 836 aa12.49□□□□□ -0.41
NEK4-201ENST00000233027 OR13F1Q8NGS4 319 aa12.49□□□□□ -0.41
NEK4-201ENST00000233027 OR9A4Q8NGU2 314 aa12.49□□□□□ -0.41
NEK4-201ENST00000233027 NIPSNAP1Q9BPW8 284 aa12.49□□□□□ -0.41
NEK4-201ENST00000233027 KCNJ16Q9NPI9 418 aa12.49□□□□□ -0.41
NEK4-201ENST00000233027 ATPIF1Q9UII2 106 aa12.49□□□□□ -0.41
NEK4-201ENST00000233027 GOLGA4Q13439 2230 aaKnown RBP12.49□□□□□ -0.41
NEK4-201ENST00000233027 TSPAN11A1L157 253 aa12.49□□□□□ -0.41
NEK4-201ENST00000233027 GJE1A6NN92 205 aa12.49□□□□□ -0.41
NEK4-201ENST00000233027 OR8G3PP0DMU2 310 aa12.49□□□□□ -0.41
NEK4-201ENST00000233027 HLA-FP30511 346 aa12.49□□□□□ -0.41
NEK4-201ENST00000233027 SEC61A1P61619 476 aaKnown RBP12.49□□□□□ -0.41
NEK4-201ENST00000233027 DSC1Q08554 894 aa12.49□□□□□ -0.41
NEK4-201ENST00000233027 KIR2DS3Q14952 304 aa12.49□□□□□ -0.41
NEK4-201ENST00000233027 LTB4RQ15722 352 aa12.49□□□□□ -0.41
NEK4-201ENST00000233027 FAM109AQ8N4B1 249 aa12.49□□□□□ -0.41
NEK4-201ENST00000233027 ADAMTS14Q8WXS8 1223 aa12.49□□□□□ -0.41
NEK4-201ENST00000233027 PDLIM5Q96HC4 596 aaKnown RBP12.49□□□□□ -0.41
NEK4-201ENST00000233027 TEX37Q96LM6 180 aa12.49□□□□□ -0.41
NEK4-201ENST00000233027 MRI1Q9BV20 369 aa12.49□□□□□ -0.41
NEK4-201ENST00000233027 TXNL4BQ9NX01 149 aaKnown RBP12.49□□□□□ -0.41
NEK4-201ENST00000233027 ACOT8O14734 319 aa12.49□□□□□ -0.41
NEK4-201ENST00000233027 WDPCPO95876 746 aa12.49□□□□□ -0.41
NEK4-201ENST00000233027 SHC1P29353 583 aa12.49□□□□□ -0.41
NEK4-201ENST00000233027 DEFB103AP81534 67 aa12.49□□□□□ -0.41
NEK4-201ENST00000233027 MRPS10P82664 201 aaKnown RBP12.49□□□□□ -0.41
NEK4-201ENST00000233027 HNRNPA1L2Q32P51 320 aaKnown RBP12.49□□□□□ -0.41
NEK4-201ENST00000233027 VRK3Q8IV63 474 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms