RNA–Protein interactions for RNA: ENST00000228827.7

GPN3-201, Transcript of GPN-loop GTPase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPN3, Length 1,468 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-201ENST00000228827 AGAP5A6NIR3 686 aa12.65□□□□□ -0.38
GPN3-201ENST00000228827 SULT2B1O00204 365 aa12.65□□□□□ -0.38
GPN3-201ENST00000228827 SMAD9O15198 467 aaKnown RBP12.65□□□□□ -0.38
GPN3-201ENST00000228827 FESP07332 822 aa12.65□□□□□ -0.38
GPN3-201ENST00000228827 CD53P19397 219 aa12.65□□□□□ -0.38
GPN3-201ENST00000228827 APOBEC1P41238 236 aaKnown RBP12.65□□□□□ -0.38
GPN3-201ENST00000228827 DIO1P49895 249 aa12.65□□□□□ -0.38
GPN3-201ENST00000228827 MVDP53602 400 aa12.65□□□□□ -0.38
GPN3-201ENST00000228827 TXNL4AP83876 142 aaKnown RBP12.65□□□□□ -0.38
GPN3-201ENST00000228827 RASGEF1BQ0VAM2 473 aa12.65□□□□□ -0.38
GPN3-201ENST00000228827 TSC22D1Q15714 1073 aa12.65□□□□□ -0.38
GPN3-201ENST00000228827 SYT14P1Q58G82 188 aa12.65□□□□□ -0.38
GPN3-201ENST00000228827 AP1ARQ63HQ0 302 aa12.65□□□□□ -0.38
GPN3-201ENST00000228827 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.65□□□□□ -0.38
GPN3-201ENST00000228827 WFDC8Q8IUA0 241 aa12.65□□□□□ -0.38
GPN3-201ENST00000228827 SLC43A2Q8N370 569 aa12.65□□□□□ -0.38
GPN3-201ENST00000228827 DYDC1Q8WWB3 177 aa12.65□□□□□ -0.38
GPN3-201ENST00000228827 ITCHQ96J02 903 aa12.65□□□□□ -0.38
GPN3-201ENST00000228827 PSD2Q9BQI7 771 aa12.65□□□□□ -0.38
GPN3-201ENST00000228827 CCDC106Q9BWC9 280 aa12.65□□□□□ -0.38
GPN3-201ENST00000228827 OR11A1Q9GZK7 315 aa12.65□□□□□ -0.38
GPN3-201ENST00000228827 MTHFD2LQ9H903 347 aaPredicted RBP12.65□□□□□ -0.38
GPN3-201ENST00000228827 TPT1P8Q9HAU6 139 aa12.65□□□□□ -0.38
GPN3-201ENST00000228827 EXOSC3Q9NQT5 275 aaKnown RBP12.65□□□□□ -0.38
GPN3-201ENST00000228827 KLHL9Q9P2J3 617 aa12.65□□□□□ -0.38
GPN3-201ENST00000228827 P2RX2Q9UBL9 471 aa12.65□□□□□ -0.38
GPN3-201ENST00000228827 SPIN1Q9Y657 262 aaPredicted RBP12.65□□□□□ -0.38
GPN3-201ENST00000228827 HIVEP1P15822 2718 aa12.65□□□□□ -0.38
GPN3-201ENST00000228827 POLR3GO15318 223 aaPredicted RBP12.65□□□□□ -0.38
GPN3-201ENST00000228827 BCHEP06276 602 aa12.65□□□□□ -0.38
GPN3-201ENST00000228827 CD99P14209 185 aa12.65□□□□□ -0.38
GPN3-201ENST00000228827 IL7RP16871 459 aa12.65□□□□□ -0.38
GPN3-201ENST00000228827 IDH3AP50213 366 aa12.65□□□□□ -0.38
GPN3-201ENST00000228827 STX1BP61266 288 aa12.65□□□□□ -0.38
GPN3-201ENST00000228827 GNA13Q14344 377 aa12.65□□□□□ -0.38
GPN3-201ENST00000228827 MAPK11Q15759 364 aa12.65□□□□□ -0.38
GPN3-201ENST00000228827 SLC2A7Q6PXP3 512 aa12.65□□□□□ -0.38
GPN3-201ENST00000228827 TMPPEQ6ZT21 453 aa12.65□□□□□ -0.38
GPN3-201ENST00000228827 GRINAQ7Z429 371 aa12.65□□□□□ -0.38
GPN3-201ENST00000228827 SLC25A43Q8WUT9 341 aaPredicted RBP12.65□□□□□ -0.38
GPN3-201ENST00000228827 ARL5BQ96KC2 179 aa12.65□□□□□ -0.38
GPN3-201ENST00000228827 ZNF300Q96RE9 604 aaPredicted RBP12.65□□□□□ -0.38
GPN3-201ENST00000228827 EBF4Q9BQW3 602 aa12.65□□□□□ -0.38
GPN3-201ENST00000228827 TCF7L2Q9NQB0 619 aa12.65□□□□□ -0.38
GPN3-201ENST00000228827 CHRNA9Q9UGM1 479 aa12.65□□□□□ -0.38
GPN3-201ENST00000228827 ING1Q9UK53 422 aaPredicted RBP12.65□□□□□ -0.38
GPN3-201ENST00000228827 GPR52Q9Y2T5 361 aa12.65□□□□□ -0.38
GPN3-201ENST00000228827 FAM234BA2RU67 622 aa12.64□□□□□ -0.39
GPN3-201ENST00000228827 KLF4O43474 513 aa12.64□□□□□ -0.39
GPN3-201ENST00000228827 CYTIPO60759 359 aa12.64□□□□□ -0.39
GPN3-201ENST00000228827 GCM2O75603 506 aaPredicted RBP12.64□□□□□ -0.39
GPN3-201ENST00000228827 ADAP00813 363 aa12.64□□□□□ -0.39
GPN3-201ENST00000228827 DBIP07108 87 aaKnown RBP12.64□□□□□ -0.39
GPN3-201ENST00000228827 ZCCHC18P0CG32 403 aa12.64□□□□□ -0.39
GPN3-201ENST00000228827 PPP3CBP16298 524 aa12.64□□□□□ -0.39
GPN3-201ENST00000228827 RPS4Y1P22090 263 aaKnown RBP12.64□□□□□ -0.39
GPN3-201ENST00000228827 LOXP28300 417 aaPredicted RBP12.64□□□□□ -0.39
GPN3-201ENST00000228827 DSTNP60981 165 aa12.64□□□□□ -0.39
GPN3-201ENST00000228827 PPP2R2AP63151 447 aa12.64□□□□□ -0.39
GPN3-201ENST00000228827 CSNK2A1P68400 391 aaPredicted RBP12.64□□□□□ -0.39
GPN3-201ENST00000228827 RPS26P11Q5JNZ5 115 aaPredicted RBP12.64□□□□□ -0.39
GPN3-201ENST00000228827 MRPL2Q5T653 305 aaKnown RBP12.64□□□□□ -0.39
GPN3-201ENST00000228827 MSANTD1Q6ZTZ1 278 aa12.64□□□□□ -0.39
GPN3-201ENST00000228827 VRK2Q86Y07 508 aa12.64□□□□□ -0.39
GPN3-201ENST00000228827 ADGRG3Q86Y34 549 aa12.64□□□□□ -0.39
GPN3-201ENST00000228827 TGIF2LYQ8IUE0 185 aa12.64□□□□□ -0.39
GPN3-201ENST00000228827 CMIPQ8IY22 773 aa12.64□□□□□ -0.39
GPN3-201ENST00000228827 PEX5LQ8IYB4 626 aa12.64□□□□□ -0.39
GPN3-201ENST00000228827 GABRG1Q8N1C3 465 aa12.64□□□□□ -0.39
GPN3-201ENST00000228827 GOLGA6L1Q8N7Z2 621 aa12.64□□□□□ -0.39
GPN3-201ENST00000228827 S100PBPQ96BU1 408 aa12.64□□□□□ -0.39
GPN3-201ENST00000228827 BCO1Q9HAY6 547 aa12.64□□□□□ -0.39
GPN3-201ENST00000228827 GP6Q9HCN6 339 aa12.64□□□□□ -0.39
GPN3-201ENST00000228827 RLIMQ9NVW2 624 aa12.64□□□□□ -0.39
GPN3-201ENST00000228827 PRSS50Q9UI38 385 aa12.64□□□□□ -0.39
GPN3-201ENST00000228827 TMED7-TICAM2A0A0A6YYA0 188 aa12.63□□□□□ -0.39
GPN3-201ENST00000228827 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.63□□□□□ -0.39
GPN3-201ENST00000228827 TMEM72A0PK05 275 aa12.63□□□□□ -0.39
GPN3-201ENST00000228827 GKN3PP0CG01 181 aa12.63□□□□□ -0.39
GPN3-201ENST00000228827 PSMB1P20618 241 aaKnown RBP12.63□□□□□ -0.39
GPN3-201ENST00000228827 IL32P24001 234 aa12.63□□□□□ -0.39
GPN3-201ENST00000228827 EDNRAP25101 427 aa12.63□□□□□ -0.39
GPN3-201ENST00000228827 AQP5P55064 265 aa12.63□□□□□ -0.39
GPN3-201ENST00000228827 OR2B6P58173 313 aa12.63□□□□□ -0.39
GPN3-201ENST00000228827 FOXD4Q12950 439 aaPredicted RBP12.63□□□□□ -0.39
GPN3-201ENST00000228827 BEX5Q5H9J7 111 aa12.63□□□□□ -0.39
GPN3-201ENST00000228827 ZNF836Q6ZNA1 936 aa12.63□□□□□ -0.39
GPN3-201ENST00000228827 STEAP2Q8NFT2 490 aa12.63□□□□□ -0.39
GPN3-201ENST00000228827 OR52P1PQ8NH57 321 aa12.63□□□□□ -0.39
GPN3-201ENST00000228827 GTF2H4Q92759 462 aa12.63□□□□□ -0.39
GPN3-201ENST00000228827 TMEM19Q96HH6 336 aa12.63□□□□□ -0.39
GPN3-201ENST00000228827 TACO1Q9BSH4 297 aaKnown RBP12.63□□□□□ -0.39
GPN3-201ENST00000228827 TMUB1Q9BVT8 246 aa12.63□□□□□ -0.39
GPN3-201ENST00000228827 PAIP1Q9H074 479 aaKnown RBP12.63□□□□□ -0.39
GPN3-201ENST00000228827 TMED7Q9Y3B3 224 aa12.63□□□□□ -0.39
GPN3-201ENST00000228827 PCDHB14Q9Y5E9 798 aa12.63□□□□□ -0.39
GPN3-201ENST00000228827 TEP1Q99973 2627 aaKnown RBP12.63□□□□□ -0.39
GPN3-201ENST00000228827 SPG11Q96JI7 2443 aa12.62□□□□□ -0.39
GPN3-201ENST00000228827 CFAP73A6NFT4 308 aa12.62□□□□□ -0.39
GPN3-201ENST00000228827 ZNF814B7Z6K7 855 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms