RNA–Protein interactions for RNA: ENST00000225519.3

SHPK-201, Transcript of sedoheptulokinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHPK, Length 3,838 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPK-201ENST00000225519 TSNAXQ99598 290 aaKnown RBP13.2□□□□□ -0.3
SHPK-201ENST00000225519 MRPL17Q9NRX2 175 aaKnown RBP13.2□□□□□ -0.3
SHPK-201ENST00000225519 GNG8Q9UK08 70 aa13.2□□□□□ -0.3
SHPK-201ENST00000225519 HS3ST2Q9Y278 367 aa13.2□□□□□ -0.3
SHPK-201ENST00000225519 GABARAPH6UMI1 98 aa13.19□□□□□ -0.3
SHPK-201ENST00000225519 SYT5O00445 386 aa13.19□□□□□ -0.3
SHPK-201ENST00000225519 GSTZ1O43708 216 aaPredicted RBP13.19□□□□□ -0.3
SHPK-201ENST00000225519 SBK2P0C263 348 aa13.19□□□□□ -0.3
SHPK-201ENST00000225519 CD53P19397 219 aa13.19□□□□□ -0.3
SHPK-201ENST00000225519 NAA10P41227 235 aaPredicted RBP13.19□□□□□ -0.3
SHPK-201ENST00000225519 FAM74A1Q5RGS3 127 aa13.19□□□□□ -0.3
SHPK-201ENST00000225519 TMEM17Q86X19 198 aa13.19□□□□□ -0.3
SHPK-201ENST00000225519 OR5T2Q8NGG2 359 aa13.19□□□□□ -0.3
SHPK-201ENST00000225519 MACROD1Q9BQ69 325 aa13.19□□□□□ -0.3
SHPK-201ENST00000225519 PRDM9Q9NQV7 894 aa13.19□□□□□ -0.3
SHPK-201ENST00000225519 CALML5Q9NZT1 146 aa13.19□□□□□ -0.3
SHPK-201ENST00000225519 PCDHGA9Q9Y5G4 932 aaKnown RBP13.19□□□□□ -0.3
SHPK-201ENST00000225519 IRAK3Q9Y616 596 aa13.19□□□□□ -0.3
SHPK-201ENST00000225519 DNASE2O00115 360 aaPredicted RBP13.19□□□□□ -0.3
SHPK-201ENST00000225519 IGF2P01344 180 aa13.19□□□□□ -0.3
SHPK-201ENST00000225519 CLDN2P57739 230 aa13.19□□□□□ -0.3
SHPK-201ENST00000225519 SORDQ00796 357 aa13.19□□□□□ -0.3
SHPK-201ENST00000225519 GPNMBQ14956 572 aa13.19□□□□□ -0.3
SHPK-201ENST00000225519 B3GNTL1Q67FW5 361 aaPredicted RBP13.19□□□□□ -0.3
SHPK-201ENST00000225519 OR56A1Q8NGH5 318 aa13.19□□□□□ -0.3
SHPK-201ENST00000225519 OR1S1Q8NH92 325 aa13.19□□□□□ -0.3
SHPK-201ENST00000225519 HS6ST2Q96MM7 605 aa13.19□□□□□ -0.3
SHPK-201ENST00000225519 CASD1Q96PB1 797 aa13.19□□□□□ -0.3
SHPK-201ENST00000225519 ZNF768Q9H5H4 540 aaKnown RBP13.19□□□□□ -0.3
SHPK-201ENST00000225519 INPP5EQ9NRR6 644 aa13.19□□□□□ -0.3
SHPK-201ENST00000225519 ZNF879B4DU55 563 aa13.19□□□□□ -0.3
SHPK-201ENST00000225519 FUT5Q11128 374 aa13.19□□□□□ -0.3
SHPK-201ENST00000225519 C4orf46Q504U0 113 aa13.19□□□□□ -0.3
SHPK-201ENST00000225519 CCDC157Q569K6 752 aa13.19□□□□□ -0.3
SHPK-201ENST00000225519 TMEM88Q6PEY1 159 aa13.19□□□□□ -0.3
SHPK-201ENST00000225519 NUP43Q8NFH3 380 aa13.19□□□□□ -0.3
SHPK-201ENST00000225519 CYB5D2Q8WUJ1 264 aa13.19□□□□□ -0.3
SHPK-201ENST00000225519 MRPS24Q96EL2 167 aaKnown RBP13.19□□□□□ -0.3
SHPK-201ENST00000225519 DEFB118Q96PH6 123 aa13.19□□□□□ -0.3
SHPK-201ENST00000225519 ZNF334Q9HCZ1 680 aaPredicted RBP13.19□□□□□ -0.3
SHPK-201ENST00000225519 SIDT1Q9NXL6 827 aaKnown RBP13.19□□□□□ -0.3
SHPK-201ENST00000225519 SMAD9O15198 467 aaKnown RBP13.18□□□□□ -0.3
SHPK-201ENST00000225519 PTP4A3O75365 173 aa13.18□□□□□ -0.3
SHPK-201ENST00000225519 SLC9A5Q14940 896 aa13.18□□□□□ -0.3
SHPK-201ENST00000225519 LCTLQ6UWM7 567 aa13.18□□□□□ -0.3
SHPK-201ENST00000225519 Q6ZNB5 142 aa13.18□□□□□ -0.3
SHPK-201ENST00000225519 FAM98AQ8NCA5 519 aaKnown RBP13.18□□□□□ -0.3
SHPK-201ENST00000225519 OR2A12Q8NGT7 310 aa13.18□□□□□ -0.3
SHPK-201ENST00000225519 THEM6Q8WUY1 208 aa13.18□□□□□ -0.3
SHPK-201ENST00000225519 PDCD1LG2Q9BQ51 273 aa13.18□□□□□ -0.3
SHPK-201ENST00000225519 SLC38A1Q9H2H9 487 aa13.18□□□□□ -0.3
SHPK-201ENST00000225519 ANKRD19PQ9H560 264 aa13.18□□□□□ -0.3
SHPK-201ENST00000225519 MYOFQ9NZM1 2061 aa13.18□□□□□ -0.3
SHPK-201ENST00000225519 FCMRO60667 390 aa13.18□□□□□ -0.3
SHPK-201ENST00000225519 RCBTB2O95199 551 aa13.18□□□□□ -0.3
SHPK-201ENST00000225519 TIMP2P16035 220 aa13.18□□□□□ -0.3
SHPK-201ENST00000225519 FAUP35544 74 aaKnown RBP13.18□□□□□ -0.3
SHPK-201ENST00000225519 PSMB10P40306 273 aa13.18□□□□□ -0.3
SHPK-201ENST00000225519 MC3RP41968 323 aa13.18□□□□□ -0.3
SHPK-201ENST00000225519 MPP7Q5T2T1 576 aa13.18□□□□□ -0.3
SHPK-201ENST00000225519 OR4C11Q6IEV9 310 aa13.18□□□□□ -0.3
SHPK-201ENST00000225519 FAM129CQ86XR2 697 aa13.18□□□□□ -0.3
SHPK-201ENST00000225519 NAXDQ8IW45 347 aa13.18□□□□□ -0.3
SHPK-201ENST00000225519 TMEM185AQ8NFB2 350 aa13.18□□□□□ -0.3
SHPK-201ENST00000225519 OR5M9Q8NGP3 310 aa13.18□□□□□ -0.3
SHPK-201ENST00000225519 ZMYND19Q96E35 227 aaPredicted RBP13.18□□□□□ -0.3
SHPK-201ENST00000225519 TCEAL4Q96EI5 215 aa13.18□□□□□ -0.3
SHPK-201ENST00000225519 SEMA4CQ9C0C4 833 aa13.18□□□□□ -0.3
SHPK-201ENST00000225519 PLXNB3Q9ULL4 1909 aa13.18□□□□□ -0.3
SHPK-201ENST00000225519 GALR3O60755 368 aaPredicted RBP13.18□□□□□ -0.3
SHPK-201ENST00000225519 RLN2P04090 185 aa13.18□□□□□ -0.3
SHPK-201ENST00000225519 ZNF3P17036 446 aa13.18□□□□□ -0.3
SHPK-201ENST00000225519 CRMP1Q14194 572 aa13.18□□□□□ -0.3
SHPK-201ENST00000225519 ZNF626Q68DY1 528 aa13.18□□□□□ -0.3
SHPK-201ENST00000225519 SYNPRQ8TBG9 265 aa13.18□□□□□ -0.3
SHPK-201ENST00000225519 HAVCR2Q8TDQ0 301 aa13.18□□□□□ -0.3
SHPK-201ENST00000225519 FN3KQ9H479 309 aa13.18□□□□□ -0.3
SHPK-201ENST00000225519 ZNF304Q9HCX3 659 aa13.18□□□□□ -0.3
SHPK-201ENST00000225519 FBXL4Q9UKA2 621 aa13.18□□□□□ -0.3
SHPK-201ENST00000225519 PCDHGA5Q9Y5G8 931 aa13.18□□□□□ -0.3
SHPK-201ENST00000225519 TRAV1-2A0A0B4J238 106 aa13.17□□□□□ -0.3
SHPK-201ENST00000225519 ACOD1A6NK06 481 aa13.17□□□□□ -0.3
SHPK-201ENST00000225519 KCNJ13O60928 360 aa13.17□□□□□ -0.3
SHPK-201ENST00000225519 CPN1P15169 458 aa13.17□□□□□ -0.3
SHPK-201ENST00000225519 CSNK2A2P19784 350 aaPredicted RBP13.17□□□□□ -0.3
SHPK-201ENST00000225519 ART1P52961 327 aa13.17□□□□□ -0.3
SHPK-201ENST00000225519 GPR85P60893 370 aa13.17□□□□□ -0.3
SHPK-201ENST00000225519 FOXK2Q01167 660 aa13.17□□□□□ -0.3
SHPK-201ENST00000225519 KRT33BQ14525 404 aa13.17□□□□□ -0.3
SHPK-201ENST00000225519 AGERQ15109 404 aa13.17□□□□□ -0.3
SHPK-201ENST00000225519 FAM26DQ5JW98 314 aa13.17□□□□□ -0.3
SHPK-201ENST00000225519 PXKQ7Z7A4 578 aa13.17□□□□□ -0.3
SHPK-201ENST00000225519 DNAAF1Q8NEP3 725 aa13.17□□□□□ -0.3
SHPK-201ENST00000225519 TFGQ92734 400 aaPredicted RBP13.17□□□□□ -0.3
SHPK-201ENST00000225519 ARHGDIGQ99819 225 aa13.17□□□□□ -0.3
SHPK-201ENST00000225519 TMPRSS13Q9BYE2 586 aa13.17□□□□□ -0.3
SHPK-201ENST00000225519 ENKD1Q9H0I2 346 aa13.17□□□□□ -0.3
SHPK-201ENST00000225519 DNTTIP1Q9H147 329 aa13.17□□□□□ -0.3
SHPK-201ENST00000225519 CDV3Q9UKY7 258 aaKnown RBP13.17□□□□□ -0.3
SHPK-201ENST00000225519 ZMIZ1Q9ULJ6 1067 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms