RNA–Protein interactions for RNA: ENST00000216211.8

UPK3A-201, Transcript of uroplakin 3A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene UPK3A, Length 1,051 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3A-201ENST00000216211 UBL4AP11441 157 aa13.33□□□□□ -0.28
UPK3A-201ENST00000216211 MATN1P21941 496 aa13.33□□□□□ -0.28
UPK3A-201ENST00000216211 ENPP1P22413 925 aa13.33□□□□□ -0.28
UPK3A-201ENST00000216211 CLDN8P56748 225 aa13.33□□□□□ -0.28
UPK3A-201ENST00000216211 SELENBP1Q13228 472 aa13.33□□□□□ -0.28
UPK3A-201ENST00000216211 MAD2L1Q13257 205 aaPredicted RBP13.33□□□□□ -0.28
UPK3A-201ENST00000216211 QPRTQ15274 297 aa13.33□□□□□ -0.28
UPK3A-201ENST00000216211 GPR68Q15743 365 aa13.33□□□□□ -0.28
UPK3A-201ENST00000216211 SLC9B1Q4ZJI4 515 aa13.33□□□□□ -0.28
UPK3A-201ENST00000216211 OR4F3Q6IEY1 312 aa13.33□□□□□ -0.28
UPK3A-201ENST00000216211 ASRGL1Q7L266 308 aa13.33□□□□□ -0.28
UPK3A-201ENST00000216211 C6orf120Q7Z4R8 191 aa13.33□□□□□ -0.28
UPK3A-201ENST00000216211 GABRG1Q8N1C3 465 aa13.33□□□□□ -0.28
UPK3A-201ENST00000216211 ZNF619Q8N2I2 560 aa13.33□□□□□ -0.28
UPK3A-201ENST00000216211 ZNF611Q8N823 705 aa13.33□□□□□ -0.28
UPK3A-201ENST00000216211 TOR1AIP2Q8NFQ8 470 aa13.33□□□□□ -0.28
UPK3A-201ENST00000216211 STEAP2Q8NFT2 490 aa13.33□□□□□ -0.28
UPK3A-201ENST00000216211 OR5W2Q8NH69 310 aa13.33□□□□□ -0.28
UPK3A-201ENST00000216211 AKAP1Q92667 903 aaKnown RBP eCLIP13.33□□□□□ -0.28
UPK3A-201ENST00000216211 MAELQ96JY0 434 aaKnown RBP13.33□□□□□ -0.28
UPK3A-201ENST00000216211 SLC35G5Q96KT7 338 aa13.33□□□□□ -0.28
UPK3A-201ENST00000216211 MRGPRX4Q96LA9 322 aa13.33□□□□□ -0.28
UPK3A-201ENST00000216211 KCNE5Q9UJ90 142 aa13.33□□□□□ -0.28
UPK3A-201ENST00000216211 USF3Q68DE3 2245 aa13.33□□□□□ -0.28
UPK3A-201ENST00000216211 CENPVL1A0A0U1RR11 272 aa13.32□□□□□ -0.28
UPK3A-201ENST00000216211 CFAP73A6NFT4 308 aa13.32□□□□□ -0.28
UPK3A-201ENST00000216211 SERINC4A6NH21 518 aa13.32□□□□□ -0.28
UPK3A-201ENST00000216211 FCMRO60667 390 aa13.32□□□□□ -0.28
UPK3A-201ENST00000216211 CYP7B1O75881 506 aa13.32□□□□□ -0.28
UPK3A-201ENST00000216211 CNOT4O95628 575 aaKnown RBP13.32□□□□□ -0.28
UPK3A-201ENST00000216211 YES1P07947 543 aa13.32□□□□□ -0.28
UPK3A-201ENST00000216211 IL32P24001 234 aa13.32□□□□□ -0.28
UPK3A-201ENST00000216211 SLC7A1P30825 629 aa13.32□□□□□ -0.28
UPK3A-201ENST00000216211 RASSF2P50749 326 aa13.32□□□□□ -0.28
UPK3A-201ENST00000216211 CASP9P55211 416 aa13.32□□□□□ -0.28
UPK3A-201ENST00000216211 C21orf58P58505 322 aa13.32□□□□□ -0.28
UPK3A-201ENST00000216211 EMX2Q04743 252 aa13.32□□□□□ -0.28
UPK3A-201ENST00000216211 CBFBQ13951 182 aa13.32□□□□□ -0.28
UPK3A-201ENST00000216211 PDCD2Q16342 344 aaPredicted RBP13.32□□□□□ -0.28
UPK3A-201ENST00000216211 SLC25A53Q5H9E4 307 aa13.32□□□□□ -0.28
UPK3A-201ENST00000216211 SFRP5Q5T4F7 317 aa13.32□□□□□ -0.28
UPK3A-201ENST00000216211 BHLHB9Q6PI77 547 aa13.32□□□□□ -0.28
UPK3A-201ENST00000216211 PSD2Q9BQI7 771 aa13.32□□□□□ -0.28
UPK3A-201ENST00000216211 THUMPD3Q9BV44 507 aaKnown RBP13.32□□□□□ -0.28
UPK3A-201ENST00000216211 HDHD5Q9BXW7 423 aa13.32□□□□□ -0.28
UPK3A-201ENST00000216211 CXorf56Q9H5V9 222 aa13.32□□□□□ -0.28
UPK3A-201ENST00000216211 TCF7L2Q9NQB0 619 aa13.32□□□□□ -0.28
UPK3A-201ENST00000216211 ARL8BQ9NVJ2 186 aa13.32□□□□□ -0.28
UPK3A-201ENST00000216211 NOP53Q9NZM5 478 aaKnown RBP13.32□□□□□ -0.28
UPK3A-201ENST00000216211 ING1Q9UK53 422 aaPredicted RBP13.32□□□□□ -0.28
UPK3A-201ENST00000216211 MKLN1Q9UL63 735 aa13.32□□□□□ -0.28
UPK3A-201ENST00000216211 TRIM33Q9UPN9 1127 aa13.32□□□□□ -0.28
UPK3A-201ENST00000216211 RNF103-CHMP3A0A140T963 221 aa13.31□□□□□ -0.28
UPK3A-201ENST00000216211 ZNF814B7Z6K7 855 aa13.31□□□□□ -0.28
UPK3A-201ENST00000216211 C9JVG2 144 aa13.31□□□□□ -0.28
UPK3A-201ENST00000216211 SDHDO14521 159 aa13.31□□□□□ -0.28
UPK3A-201ENST00000216211 UGT2B17O75795 530 aa13.31□□□□□ -0.28
UPK3A-201ENST00000216211 H6PDO95479 791 aa13.31□□□□□ -0.28
UPK3A-201ENST00000216211 PAX1P15863 534 aa13.31□□□□□ -0.28
UPK3A-201ENST00000216211 CALB2P22676 271 aa13.31□□□□□ -0.28
UPK3A-201ENST00000216211 PCSK6P29122 969 aa13.31□□□□□ -0.28
UPK3A-201ENST00000216211 RAC3P60763 192 aa13.31□□□□□ -0.28
UPK3A-201ENST00000216211 SKP2Q13309 424 aa13.31□□□□□ -0.28
UPK3A-201ENST00000216211 CAPRIN1Q14444 709 aaKnown RBP13.31□□□□□ -0.28
UPK3A-201ENST00000216211 TAB1Q15750 504 aa13.31□□□□□ -0.28
UPK3A-201ENST00000216211 ARHGAP11BQ3KRB8 267 aa13.31□□□□□ -0.28
UPK3A-201ENST00000216211 TIGD2Q4W5G0 525 aa13.31□□□□□ -0.28
UPK3A-201ENST00000216211 NCMAPQ5T1S8 102 aa13.31□□□□□ -0.28
UPK3A-201ENST00000216211 ATG4DQ86TL0 474 aaPredicted RBP13.31□□□□□ -0.28
UPK3A-201ENST00000216211 SLC43A2Q8N370 569 aa13.31□□□□□ -0.28
UPK3A-201ENST00000216211 OR4A15Q8NGL6 344 aa13.31□□□□□ -0.28
UPK3A-201ENST00000216211 LILRB1Q8NHL6 650 aaPredicted RBP13.31□□□□□ -0.28
UPK3A-201ENST00000216211 KISS1RQ969F8 398 aaPredicted RBP13.31□□□□□ -0.28
UPK3A-201ENST00000216211 ZNF775Q96BV0 537 aaPredicted RBP13.31□□□□□ -0.28
UPK3A-201ENST00000216211 OR5B2Q96R09 309 aa13.31□□□□□ -0.28
UPK3A-201ENST00000216211 OR52B2Q96RD2 323 aa13.31□□□□□ -0.28
UPK3A-201ENST00000216211 NUF2Q9BZD4 464 aa13.31□□□□□ -0.28
UPK3A-201ENST00000216211 LAT2Q9GZY6 243 aa13.31□□□□□ -0.28
UPK3A-201ENST00000216211 QRSL1Q9H0R6 528 aaKnown RBP13.31□□□□□ -0.28
UPK3A-201ENST00000216211 LRMDAQ9H2I8 198 aa13.31□□□□□ -0.28
UPK3A-201ENST00000216211 OR51I1Q9H343 314 aa13.31□□□□□ -0.28
UPK3A-201ENST00000216211 AKTIPQ9H8T0 292 aa13.31□□□□□ -0.28
UPK3A-201ENST00000216211 MEAF6Q9HAF1 191 aa13.31□□□□□ -0.28
UPK3A-201ENST00000216211 GP6Q9HCN6 339 aa13.31□□□□□ -0.28
UPK3A-201ENST00000216211 ZNF701Q9NV72 531 aaPredicted RBP13.31□□□□□ -0.28
UPK3A-201ENST00000216211 ASIC5Q9NY37 505 aa13.31□□□□□ -0.28
UPK3A-201ENST00000216211 PRSS50Q9UI38 385 aa13.31□□□□□ -0.28
UPK3A-201ENST00000216211 LAMP3Q9UQV4 416 aa13.31□□□□□ -0.28
UPK3A-201ENST00000216211 CAPN7Q9Y6W3 813 aa13.31□□□□□ -0.28
UPK3A-201ENST00000216211 TLN2Q9Y4G6 2542 aa13.31□□□□□ -0.28
UPK3A-201ENST00000216211 DUXAA6NLW8 204 aa13.3□□□□□ -0.28
UPK3A-201ENST00000216211 ETV2O00321 342 aaPredicted RBP13.3□□□□□ -0.28
UPK3A-201ENST00000216211 RNASET2O00584 256 aaKnown RBP13.3□□□□□ -0.28
UPK3A-201ENST00000216211 SMAD9O15198 467 aaKnown RBP13.3□□□□□ -0.28
UPK3A-201ENST00000216211 CLOCKO15516 846 aa13.3□□□□□ -0.28
UPK3A-201ENST00000216211 STX11O75558 287 aa13.3□□□□□ -0.28
UPK3A-201ENST00000216211 AK1P00568 194 aa13.3□□□□□ -0.28
UPK3A-201ENST00000216211 CD3EP07766 207 aa13.3□□□□□ -0.28
UPK3A-201ENST00000216211 UBTFL6P0CB48 400 aaPredicted RBP13.3□□□□□ -0.28
UPK3A-201ENST00000216211 EDNRAP25101 427 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms