RNA–Protein interactions for RNA: ENST00000005226.11

USH1C-201, Transcript of USH1 protein network component harmonin, humanhuman

APPRIS P3 TSL 5 BASIC

Gene USH1C, Length 2,700 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-201ENST00000005226 SC5DO75845 299 aa12.97□□□□□ -0.33
USH1C-201ENST00000005226 UBL3O95164 117 aa12.97□□□□□ -0.33
USH1C-201ENST00000005226 EML2O95834 649 aa12.97□□□□□ -0.33
USH1C-201ENST00000005226 SULT1A3P0DMM9 295 aa12.97□□□□□ -0.33
USH1C-201ENST00000005226 SULT1A4P0DMN0 295 aa12.97□□□□□ -0.33
USH1C-201ENST00000005226 MAT2AP31153 395 aaKnown RBP12.97□□□□□ -0.33
USH1C-201ENST00000005226 GDNFP39905 211 aa12.97□□□□□ -0.33
USH1C-201ENST00000005226 PUDPQ08623 228 aa12.97□□□□□ -0.33
USH1C-201ENST00000005226 RUNX2Q13950 521 aa12.97□□□□□ -0.33
USH1C-201ENST00000005226 EXOSC7Q15024 291 aaKnown RBP12.97□□□□□ -0.33
USH1C-201ENST00000005226 GXYLT1Q4G148 440 aa12.97□□□□□ -0.33
USH1C-201ENST00000005226 LINGO2Q7L985 606 aa12.97□□□□□ -0.33
USH1C-201ENST00000005226 RANBP3LQ86VV4 465 aaPredicted RBP12.97□□□□□ -0.33
USH1C-201ENST00000005226 TPRA1Q86W33 373 aa12.97□□□□□ -0.33
USH1C-201ENST00000005226 CMTM4Q8IZR5 234 aa12.97□□□□□ -0.33
USH1C-201ENST00000005226 SDR9C7Q8NEX9 313 aa12.97□□□□□ -0.33
USH1C-201ENST00000005226 OR4K13Q8NH42 304 aa12.97□□□□□ -0.33
USH1C-201ENST00000005226 OR4C6Q8NH72 309 aa12.97□□□□□ -0.33
USH1C-201ENST00000005226 CAPNS2Q96L46 248 aa12.97□□□□□ -0.33
USH1C-201ENST00000005226 MS4A4EQ96PG1 132 aa12.97□□□□□ -0.33
USH1C-201ENST00000005226 DDOQ99489 341 aa12.97□□□□□ -0.33
USH1C-201ENST00000005226 SEC22CQ9BRL7 303 aa12.97□□□□□ -0.33
USH1C-201ENST00000005226 TMEM168Q9H0V1 697 aa12.97□□□□□ -0.33
USH1C-201ENST00000005226 LRRN3Q9H3W5 708 aa12.97□□□□□ -0.33
USH1C-201ENST00000005226 CACYBPQ9HB71 228 aaKnown RBP12.97□□□□□ -0.33
USH1C-201ENST00000005226 ST6GALNAC2Q9UJ37 374 aa12.97□□□□□ -0.33
USH1C-201ENST00000005226 RCE1Q9Y256 329 aa12.97□□□□□ -0.33
USH1C-201ENST00000005226 LRRC72A6NJI9 287 aa12.96□□□□□ -0.33
USH1C-201ENST00000005226 SLC22A31A6NKX4 558 aa12.96□□□□□ -0.33
USH1C-201ENST00000005226 DUXAA6NLW8 204 aa12.96□□□□□ -0.33
USH1C-201ENST00000005226 TEX46H3BTG2 121 aa12.96□□□□□ -0.33
USH1C-201ENST00000005226 VEGFCP49767 419 aa12.96□□□□□ -0.33
USH1C-201ENST00000005226 PLAURQ03405 335 aa12.96□□□□□ -0.33
USH1C-201ENST00000005226 AANATQ16613 207 aa12.96□□□□□ -0.33
USH1C-201ENST00000005226 ARHGAP11BQ3KRB8 267 aa12.96□□□□□ -0.33
USH1C-201ENST00000005226 CDONQ4KMG0 1287 aa12.96□□□□□ -0.33
USH1C-201ENST00000005226 TMEM65Q6PI78 240 aa12.96□□□□□ -0.33
USH1C-201ENST00000005226 ASPGQ86U10 573 aa12.96□□□□□ -0.33
USH1C-201ENST00000005226 OR52E2Q8NGJ4 325 aa12.96□□□□□ -0.33
USH1C-201ENST00000005226 OR2T4Q8NH00 348 aa12.96□□□□□ -0.33
USH1C-201ENST00000005226 RPLP0P6Q8NHW5 317 aa12.96□□□□□ -0.33
USH1C-201ENST00000005226 ZNF296Q8WUU4 475 aaPredicted RBP12.96□□□□□ -0.33
USH1C-201ENST00000005226 NXPE2Q96DL1 559 aa12.96□□□□□ -0.33
USH1C-201ENST00000005226 FKRPQ9H9S5 495 aa12.96□□□□□ -0.33
USH1C-201ENST00000005226 DIABLOQ9NR28 239 aa12.96□□□□□ -0.33
USH1C-201ENST00000005226 KCMF1Q9P0J7 381 aa12.96□□□□□ -0.33
USH1C-201ENST00000005226 SCML1Q9UN30 329 aa12.96□□□□□ -0.33
USH1C-201ENST00000005226 CHD9Q3L8U1 2897 aa12.96□□□□□ -0.34
USH1C-201ENST00000005226 A0A1W2PP55 124 aa12.96□□□□□ -0.34
USH1C-201ENST00000005226 GXYLT2A0PJZ3 443 aa12.96□□□□□ -0.34
USH1C-201ENST00000005226 RIIAD1A6NNX1 92 aa12.96□□□□□ -0.34
USH1C-201ENST00000005226 B8ZZF3 427 aa12.96□□□□□ -0.34
USH1C-201ENST00000005226 RNGTTO60942 597 aaKnown RBP12.96□□□□□ -0.34
USH1C-201ENST00000005226 ADAM11O75078 769 aa12.96□□□□□ -0.34
USH1C-201ENST00000005226 GRPRP30550 384 aa12.96□□□□□ -0.34
USH1C-201ENST00000005226 GDI2P50395 445 aaKnown RBP12.96□□□□□ -0.34
USH1C-201ENST00000005226 MMP15P51511 669 aa12.96□□□□□ -0.34
USH1C-201ENST00000005226 NRG3P56975 720 aa12.96□□□□□ -0.34
USH1C-201ENST00000005226 KLF9Q13886 244 aaPredicted RBP12.96□□□□□ -0.34
USH1C-201ENST00000005226 BTN2A1Q7KYR7 527 aa12.96□□□□□ -0.34
USH1C-201ENST00000005226 ZNF433Q8N7K0 673 aaPredicted RBP12.96□□□□□ -0.34
USH1C-201ENST00000005226 HAVCR2Q8TDQ0 301 aa12.96□□□□□ -0.34
USH1C-201ENST00000005226 PELI1Q96FA3 418 aa12.96□□□□□ -0.34
USH1C-201ENST00000005226 TEX101Q9BY14 249 aa12.96□□□□□ -0.34
USH1C-201ENST00000005226 CLEC4MQ9H2X3 399 aaPredicted RBP12.96□□□□□ -0.34
USH1C-201ENST00000005226 KLK11Q9UBX7 282 aa12.96□□□□□ -0.34
USH1C-201ENST00000005226 FAM171A2A8MVW0 826 aa12.95□□□□□ -0.34
USH1C-201ENST00000005226 H3BSH0 61 aa12.95□□□□□ -0.34
USH1C-201ENST00000005226 FLRT2O43155 660 aa12.95□□□□□ -0.34
USH1C-201ENST00000005226 BMP8BP34820 402 aa12.95□□□□□ -0.34
USH1C-201ENST00000005226 BLVRAP53004 296 aa12.95□□□□□ -0.34
USH1C-201ENST00000005226 RPE65Q16518 533 aa12.95□□□□□ -0.34
USH1C-201ENST00000005226 COL28A1Q2UY09 1125 aa12.95□□□□□ -0.34
USH1C-201ENST00000005226 RTL4Q6ZR62 310 aa12.95□□□□□ -0.34
USH1C-201ENST00000005226 PRSS41Q7RTY9 318 aa12.95□□□□□ -0.34
USH1C-201ENST00000005226 BMP8AQ7Z5Y6 402 aa12.95□□□□□ -0.34
USH1C-201ENST00000005226 MS4A15Q8N5U1 240 aa12.95□□□□□ -0.34
USH1C-201ENST00000005226 MFSD9Q8NBP5 474 aa12.95□□□□□ -0.34
USH1C-201ENST00000005226 OR4K14Q8NGD5 310 aa12.95□□□□□ -0.34
USH1C-201ENST00000005226 CNOT9Q92600 299 aaKnown RBP12.95□□□□□ -0.34
USH1C-201ENST00000005226 C20orf85Q9H1P6 137 aa12.95□□□□□ -0.34
USH1C-201ENST00000005226 SATB2Q9UPW6 733 aa12.95□□□□□ -0.34
USH1C-201ENST00000005226 ACOD1A6NK06 481 aa12.95□□□□□ -0.34
USH1C-201ENST00000005226 C1QTNF3-AMACRE9PGA6 284 aa12.95□□□□□ -0.34
USH1C-201ENST00000005226 P2RX6O15547 441 aa12.95□□□□□ -0.34
USH1C-201ENST00000005226 GATBO75879 557 aaKnown RBP12.95□□□□□ -0.34
USH1C-201ENST00000005226 RGS11O94810 467 aa12.95□□□□□ -0.34
USH1C-201ENST00000005226 RCBTB2O95199 551 aa12.95□□□□□ -0.34
USH1C-201ENST00000005226 CEACAM5P06731 702 aa12.95□□□□□ -0.34
USH1C-201ENST00000005226 NGFRP08138 427 aa12.95□□□□□ -0.34
USH1C-201ENST00000005226 SLC2A5P22732 501 aa12.95□□□□□ -0.34
USH1C-201ENST00000005226 RAD52P43351 418 aa12.95□□□□□ -0.34
USH1C-201ENST00000005226 MNX1P50219 401 aaPredicted RBP12.95□□□□□ -0.34
USH1C-201ENST00000005226 VASPP50552 380 aaPredicted RBP12.95□□□□□ -0.34
USH1C-201ENST00000005226 HSF2Q03933 536 aa12.95□□□□□ -0.34
USH1C-201ENST00000005226 DUSP8Q13202 625 aa12.95□□□□□ -0.34
USH1C-201ENST00000005226 CEBPEQ15744 281 aa12.95□□□□□ -0.34
USH1C-201ENST00000005226 GRK1Q15835 563 aa12.95□□□□□ -0.34
USH1C-201ENST00000005226 DCST2Q5T1A1 773 aa12.95□□□□□ -0.34
USH1C-201ENST00000005226 GARNL3Q5VVW2 1013 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms