RNA–Protein interactions for RNA: ENST00000640219.1

HLA-C-210, Transcript of major histocompatibility complex, class I, C, humanhuman

BASIC

Gene HLA-C, Length 976 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-210ENST00000640219 PAGE3Q5JUK9 113 aa12.39□□□□□ -0.43
HLA-C-210ENST00000640219 HLA-DQA1Q5Y7H0 255 aa12.39□□□□□ -0.43
HLA-C-210ENST00000640219 TMEM107Q6UX40 140 aa12.39□□□□□ -0.43
HLA-C-210ENST00000640219 NPSR1Q6W5P4 371 aa12.39□□□□□ -0.43
HLA-C-210ENST00000640219 OR8J3Q8NGG0 315 aa12.39□□□□□ -0.43
HLA-C-210ENST00000640219 PUM2Q8TB72 1066 aaKnown RBP eCLIP12.39□□□□□ -0.43
HLA-C-210ENST00000640219 INTS12Q96CB8 462 aaKnown RBP12.39□□□□□ -0.43
HLA-C-210ENST00000640219 ZFP3Q96NJ6 502 aa12.39□□□□□ -0.43
HLA-C-210ENST00000640219 ADI1Q9BV57 179 aa12.39□□□□□ -0.43
HLA-C-210ENST00000640219 DPY30Q9C005 99 aa12.39□□□□□ -0.43
HLA-C-210ENST00000640219 MYNNQ9NPC7 610 aa12.39□□□□□ -0.43
HLA-C-210ENST00000640219 SLC35C2Q9NQQ7 365 aa12.39□□□□□ -0.43
HLA-C-210ENST00000640219 RAI1Q7Z5J4 1906 aaPredicted RBP12.39□□□□□ -0.43
HLA-C-210ENST00000640219 C9JVG2 144 aa12.38□□□□□ -0.43
HLA-C-210ENST00000640219 RCBTB2O95199 551 aa12.38□□□□□ -0.43
HLA-C-210ENST00000640219 IL6P05231 212 aa12.38□□□□□ -0.43
HLA-C-210ENST00000640219 CYP4B1P13584 511 aa12.38□□□□□ -0.43
HLA-C-210ENST00000640219 MAPK1P28482 360 aa12.38□□□□□ -0.43
HLA-C-210ENST00000640219 TTKP33981 857 aa12.38□□□□□ -0.43
HLA-C-210ENST00000640219 CAPGP40121 348 aa12.38□□□□□ -0.43
HLA-C-210ENST00000640219 CDK9P50750 372 aaKnown RBP12.38□□□□□ -0.43
HLA-C-210ENST00000640219 NCBP2P52298 156 aaKnown RBP eCLIP12.38□□□□□ -0.43
HLA-C-210ENST00000640219 MAP4K2Q12851 820 aa12.38□□□□□ -0.43
HLA-C-210ENST00000640219 BIKQ13323 160 aa12.38□□□□□ -0.43
HLA-C-210ENST00000640219 HEPACAMQ14CZ8 416 aa12.38□□□□□ -0.43
HLA-C-210ENST00000640219 DCST1Q5T197 706 aa12.38□□□□□ -0.43
HLA-C-210ENST00000640219 ZNF551Q7Z340 670 aaPredicted RBP12.38□□□□□ -0.43
HLA-C-210ENST00000640219 GPR141Q7Z602 305 aa12.38□□□□□ -0.43
HLA-C-210ENST00000640219 SLC15A4Q8N697 577 aa12.38□□□□□ -0.43
HLA-C-210ENST00000640219 OR4N2Q8NGD1 307 aa12.38□□□□□ -0.43
HLA-C-210ENST00000640219 ZPLD1Q8TCW7 415 aa12.38□□□□□ -0.43
HLA-C-210ENST00000640219 CYGBQ8WWM9 190 aa12.38□□□□□ -0.43
HLA-C-210ENST00000640219 ABTB1Q969K4 478 aaPredicted RBP12.38□□□□□ -0.43
HLA-C-210ENST00000640219 CTHRC1Q96CG8 243 aa12.38□□□□□ -0.43
HLA-C-210ENST00000640219 ZBED6CLQ96FA7 236 aaPredicted RBP12.38□□□□□ -0.43
HLA-C-210ENST00000640219 BBS4Q96RK4 519 aa12.38□□□□□ -0.43
HLA-C-210ENST00000640219 CGREF1Q99674 301 aa12.38□□□□□ -0.43
HLA-C-210ENST00000640219 TM9SF2Q99805 663 aa12.38□□□□□ -0.43
HLA-C-210ENST00000640219 GLIPR2Q9H4G4 154 aa12.38□□□□□ -0.43
HLA-C-210ENST00000640219 MIEF1Q9NQG6 463 aa12.38□□□□□ -0.43
HLA-C-210ENST00000640219 C1orf109Q9NX04 203 aa12.38□□□□□ -0.43
HLA-C-210ENST00000640219 SIRT5Q9NXA8 310 aa12.38□□□□□ -0.43
HLA-C-210ENST00000640219 ASIC5Q9NY37 505 aa12.38□□□□□ -0.43
HLA-C-210ENST00000640219 SMPD3Q9NY59 655 aaPredicted RBP12.38□□□□□ -0.43
HLA-C-210ENST00000640219 RSL24D1Q9UHA3 163 aaKnown RBP12.38□□□□□ -0.43
HLA-C-210ENST00000640219 WIF1Q9Y5W5 379 aa12.38□□□□□ -0.43
HLA-C-210ENST00000640219 USF3Q68DE3 2245 aa12.37□□□□□ -0.43
HLA-C-210ENST00000640219 TCRBV5S2A0A599 114 aa12.37□□□□□ -0.43
HLA-C-210ENST00000640219 OR6C76A6NM76 312 aa12.37□□□□□ -0.43
HLA-C-210ENST00000640219 TPST1O60507 370 aa12.37□□□□□ -0.43
HLA-C-210ENST00000640219 TMCC2O75069 709 aa12.37□□□□□ -0.43
HLA-C-210ENST00000640219 TRIM3O75382 744 aaPredicted RBP12.37□□□□□ -0.43
HLA-C-210ENST00000640219 HPNP05981 417 aa12.37□□□□□ -0.43
HLA-C-210ENST00000640219 RAP2AP10114 183 aa12.37□□□□□ -0.43
HLA-C-210ENST00000640219 ABCD3P28288 659 aa12.37□□□□□ -0.43
HLA-C-210ENST00000640219 ALDH3B2P48448 385 aa12.37□□□□□ -0.43
HLA-C-210ENST00000640219 EPS8Q12929 822 aa12.37□□□□□ -0.43
HLA-C-210ENST00000640219 HSPB3Q12988 150 aa12.37□□□□□ -0.43
HLA-C-210ENST00000640219 GK3PQ14409 553 aa12.37□□□□□ -0.43
HLA-C-210ENST00000640219 TOMM20Q15388 145 aa12.37□□□□□ -0.43
HLA-C-210ENST00000640219 NTRK2Q16620 822 aa12.37□□□□□ -0.43
HLA-C-210ENST00000640219 RABL3Q5HYI8 236 aa12.37□□□□□ -0.43
HLA-C-210ENST00000640219 SLC2A7Q6PXP3 512 aa12.37□□□□□ -0.43
HLA-C-210ENST00000640219 DND1Q8IYX4 353 aaKnown RBP12.37□□□□□ -0.43
HLA-C-210ENST00000640219 GCNT2Q8N0V5 402 aa12.37□□□□□ -0.43
HLA-C-210ENST00000640219 ZNF786Q8N393 782 aa12.37□□□□□ -0.43
HLA-C-210ENST00000640219 ZFP28Q8NHY6 868 aa12.37□□□□□ -0.43
HLA-C-210ENST00000640219 FBXO30Q8TB52 745 aa12.37□□□□□ -0.43
HLA-C-210ENST00000640219 DIO2Q92813 273 aa12.37□□□□□ -0.43
HLA-C-210ENST00000640219 OMA1Q96E52 524 aa12.37□□□□□ -0.43
HLA-C-210ENST00000640219 OTUB1Q96FW1 271 aaPredicted RBP12.37□□□□□ -0.43
HLA-C-210ENST00000640219 RNF145Q96MT1 663 aa12.37□□□□□ -0.43
HLA-C-210ENST00000640219 NODALQ96S42 347 aa12.37□□□□□ -0.43
HLA-C-210ENST00000640219 CHID1Q9BWS9 393 aa12.37□□□□□ -0.43
HLA-C-210ENST00000640219 RMND5AQ9H871 391 aa12.37□□□□□ -0.43
HLA-C-210ENST00000640219 FOLH1BQ9HBA9 442 aa12.37□□□□□ -0.43
HLA-C-210ENST00000640219 GALNT9Q9HCQ5 603 aa12.37□□□□□ -0.43
HLA-C-210ENST00000640219 GMPR2Q9P2T1 348 aaKnown RBP12.37□□□□□ -0.43
HLA-C-210ENST00000640219 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.37□□□□□ -0.43
HLA-C-210ENST00000640219 CDC42EP3Q9UKI2 254 aa12.37□□□□□ -0.43
HLA-C-210ENST00000640219 PSME2Q9UL46 239 aa12.37□□□□□ -0.43
HLA-C-210ENST00000640219 MYO1GB0I1T2 1018 aa12.36□□□□□ -0.43
HLA-C-210ENST00000640219 H0YAE9 185 aa12.36□□□□□ -0.43
HLA-C-210ENST00000640219 NOL3O60936 208 aaKnown RBP12.36□□□□□ -0.43
HLA-C-210ENST00000640219 UGT2B11O75310 529 aa12.36□□□□□ -0.43
HLA-C-210ENST00000640219 G6PDP11413 515 aa12.36□□□□□ -0.43
HLA-C-210ENST00000640219 PRPS2P11908 318 aa12.36□□□□□ -0.43
HLA-C-210ENST00000640219 BCKDHAP12694 445 aa12.36□□□□□ -0.43
HLA-C-210ENST00000640219 ETS2P15036 469 aa12.36□□□□□ -0.43
HLA-C-210ENST00000640219 NCK1P16333 377 aa12.36□□□□□ -0.43
HLA-C-210ENST00000640219 PRPH2P23942 346 aa12.36□□□□□ -0.43
HLA-C-210ENST00000640219 LOXP28300 417 aaPredicted RBP12.36□□□□□ -0.43
HLA-C-210ENST00000640219 IL12AP29459 219 aa12.36□□□□□ -0.43
HLA-C-210ENST00000640219 EEF1A1P68104 462 aaKnown RBP12.36□□□□□ -0.43
HLA-C-210ENST00000640219 PLCXD2Q0VAA5 305 aa12.36□□□□□ -0.43
HLA-C-210ENST00000640219 ZNF155Q12901 538 aaPredicted RBP12.36□□□□□ -0.43
HLA-C-210ENST00000640219 GAB1Q13480 694 aa12.36□□□□□ -0.43
HLA-C-210ENST00000640219 PTGR1Q14914 329 aa12.36□□□□□ -0.43
HLA-C-210ENST00000640219 FXNQ16595 210 aa12.36□□□□□ -0.43
HLA-C-210ENST00000640219 SLC36A3Q495N2 470 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms