RNA–Protein interactions for RNA: ENST00000636964.1

CLN6-217, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 3,335 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-217ENST00000636964 NPIPA5A0A0B4J1W7 369 aa10.67□□□□□ -0.7
CLN6-217ENST00000636964 CENPVL1A0A0U1RR11 272 aa10.67□□□□□ -0.7
CLN6-217ENST00000636964 LILRA5A6NI73 299 aa10.67□□□□□ -0.7
CLN6-217ENST00000636964 B4DXG7 233 aa10.67□□□□□ -0.7
CLN6-217ENST00000636964 NPIPA7E9PJI5 369 aa10.67□□□□□ -0.7
CLN6-217ENST00000636964 PTP4A3O75365 173 aa10.67□□□□□ -0.7
CLN6-217ENST00000636964 H1F0P07305 194 aaKnown RBP10.67□□□□□ -0.7
CLN6-217ENST00000636964 NPIPA8P0DM63 369 aa10.67□□□□□ -0.7
CLN6-217ENST00000636964 ELAVL4P26378 380 aaKnown RBP10.67□□□□□ -0.7
CLN6-217ENST00000636964 AVPR1BP47901 424 aa10.67□□□□□ -0.7
CLN6-217ENST00000636964 BTG2P78543 158 aa10.67□□□□□ -0.7
CLN6-217ENST00000636964 GPR68Q15743 365 aa10.67□□□□□ -0.7
CLN6-217ENST00000636964 TBCEQ15813 527 aaPredicted RBP10.67□□□□□ -0.7
CLN6-217ENST00000636964 PRTGQ2VWP7 1150 aa10.67□□□□□ -0.7
CLN6-217ENST00000636964 PROX2Q3B8N5 592 aa10.67□□□□□ -0.7
CLN6-217ENST00000636964 DCST1Q5T197 706 aa10.67□□□□□ -0.7
CLN6-217ENST00000636964 CDH24Q86UP0 819 aa10.67□□□□□ -0.7
CLN6-217ENST00000636964 C17orf82Q86X59 251 aaPredicted RBP10.67□□□□□ -0.7
CLN6-217ENST00000636964 ARHGEF39Q8N4T4 335 aa10.67□□□□□ -0.7
CLN6-217ENST00000636964 SLC7A13Q8TCU3 470 aa10.67□□□□□ -0.7
CLN6-217ENST00000636964 GGHQ92820 318 aa10.67□□□□□ -0.7
CLN6-217ENST00000636964 ARSGQ96EG1 525 aa10.67□□□□□ -0.7
CLN6-217ENST00000636964 PSORS1C1Q9UIG5 152 aa10.67□□□□□ -0.7
CLN6-217ENST00000636964 A4GNTQ9UNA3 340 aa10.67□□□□□ -0.7
CLN6-217ENST00000636964 NTNG1Q9Y2I2 539 aa10.67□□□□□ -0.7
CLN6-217ENST00000636964 TMEM184BQ9Y519 407 aaPredicted RBP10.67□□□□□ -0.7
CLN6-217ENST00000636964 HYKKA2RU49 373 aa10.66□□□□□ -0.7
CLN6-217ENST00000636964 OR10H2O60403 315 aa10.66□□□□□ -0.7
CLN6-217ENST00000636964 SOX14O95416 240 aa10.66□□□□□ -0.7
CLN6-217ENST00000636964 LGI1O95970 557 aa10.66□□□□□ -0.7
CLN6-217ENST00000636964 ALPPP05187 535 aa10.66□□□□□ -0.7
CLN6-217ENST00000636964 ZNF250P15622 560 aa10.66□□□□□ -0.7
CLN6-217ENST00000636964 SOX6P35712 828 aa10.66□□□□□ -0.7
CLN6-217ENST00000636964 RGS6P49758 472 aa10.66□□□□□ -0.7
CLN6-217ENST00000636964 NUDT6P53370 316 aa10.66□□□□□ -0.7
CLN6-217ENST00000636964 RAB38P57729 211 aa10.66□□□□□ -0.7
CLN6-217ENST00000636964 CDC73Q6P1J9 531 aa10.66□□□□□ -0.7
CLN6-217ENST00000636964 OGFOD3Q6PK18 319 aa10.66□□□□□ -0.7
CLN6-217ENST00000636964 ATCAYQ86WG3 371 aa10.66□□□□□ -0.7
CLN6-217ENST00000636964 LIX1LQ8IVB5 337 aa10.66□□□□□ -0.7
CLN6-217ENST00000636964 LAX1Q8IWV1 398 aa10.66□□□□□ -0.7
CLN6-217ENST00000636964 SLC35F3Q8IY50 421 aa10.66□□□□□ -0.7
CLN6-217ENST00000636964 ZNF675Q8TD23 568 aa10.66□□□□□ -0.7
CLN6-217ENST00000636964 SPATA5L1Q9BVQ7 753 aa10.66□□□□□ -0.7
CLN6-217ENST00000636964 UCK1Q9HA47 277 aa10.66□□□□□ -0.7
CLN6-217ENST00000636964 EIF3KQ9UBQ5 218 aaKnown RBP10.66□□□□□ -0.7
CLN6-217ENST00000636964 KCND3Q9UK17 655 aa10.66□□□□□ -0.7
CLN6-217ENST00000636964 SLC9A8Q9Y2E8 581 aa10.66□□□□□ -0.7
CLN6-217ENST00000636964 POFUT2Q9Y2G5 429 aa10.66□□□□□ -0.7
CLN6-217ENST00000636964 CHST2Q9Y4C5 530 aa10.66□□□□□ -0.7
CLN6-217ENST00000636964 TMEM131Q92545 1883 aa10.66□□□□□ -0.7
CLN6-217ENST00000636964 TGFBR3LH3BV60 316 aa10.66□□□□□ -0.7
CLN6-217ENST00000636964 HRKO00198 91 aa10.66□□□□□ -0.7
CLN6-217ENST00000636964 GATCO43716 136 aaKnown RBP10.66□□□□□ -0.7
CLN6-217ENST00000636964 SRPX2O60687 465 aaPredicted RBP10.66□□□□□ -0.7
CLN6-217ENST00000636964 PTNP21246 168 aa10.66□□□□□ -0.7
CLN6-217ENST00000636964 CHMP24386 653 aa10.66□□□□□ -0.7
CLN6-217ENST00000636964 GZMKP49863 264 aa10.66□□□□□ -0.7
CLN6-217ENST00000636964 TNK1Q13470 666 aa10.66□□□□□ -0.7
CLN6-217ENST00000636964 PRICKLE4Q2TBC4 344 aa10.66□□□□□ -0.7
CLN6-217ENST00000636964 MINDY4Q4G0A6 757 aa10.66□□□□□ -0.7
CLN6-217ENST00000636964 FIGNL1Q6PIW4 674 aa10.66□□□□□ -0.7
CLN6-217ENST00000636964 KLHL17Q6TDP4 642 aa10.66□□□□□ -0.7
CLN6-217ENST00000636964 UBALD2Q8IYN6 164 aa10.66□□□□□ -0.7
CLN6-217ENST00000636964 UBE2J2Q8N2K1 259 aa10.66□□□□□ -0.7
CLN6-217ENST00000636964 FBXW5Q969U6 566 aa10.66□□□□□ -0.7
CLN6-217ENST00000636964 HRASLS5Q96KN8 279 aa10.66□□□□□ -0.7
CLN6-217ENST00000636964 PITX2Q99697 317 aa10.66□□□□□ -0.7
CLN6-217ENST00000636964 FNDC11Q9BVV2 318 aa10.66□□□□□ -0.7
CLN6-217ENST00000636964 SRRQ9GZT4 340 aa10.66□□□□□ -0.7
CLN6-217ENST00000636964 C11orf54Q9H0W9 315 aaPredicted RBP10.66□□□□□ -0.7
CLN6-217ENST00000636964 DUSP15Q9H1R2 295 aaPredicted RBP10.66□□□□□ -0.7
CLN6-217ENST00000636964 PDE7BQ9NP56 450 aa10.66□□□□□ -0.7
CLN6-217ENST00000636964 CCNB1IP1Q9NPC3 277 aa10.66□□□□□ -0.7
CLN6-217ENST00000636964 GPR83Q9NYM4 423 aa10.66□□□□□ -0.7
CLN6-217ENST00000636964 C19orf53Q9UNZ5 99 aaPredicted RBP10.66□□□□□ -0.7
CLN6-217ENST00000636964 DUXAA6NLW8 204 aa10.66□□□□□ -0.7
CLN6-217ENST00000636964 ATP1B1P05026 303 aa10.66□□□□□ -0.7
CLN6-217ENST00000636964 STSP08842 583 aa10.66□□□□□ -0.7
CLN6-217ENST00000636964 G0S2P27469 103 aa10.66□□□□□ -0.7
CLN6-217ENST00000636964 RPL35P42766 123 aaKnown RBP10.66□□□□□ -0.7
CLN6-217ENST00000636964 RPS5P46782 204 aaKnown RBP10.66□□□□□ -0.7
CLN6-217ENST00000636964 CFHR1Q03591 330 aa10.66□□□□□ -0.7
CLN6-217ENST00000636964 FHL5Q5TD97 284 aa10.66□□□□□ -0.7
CLN6-217ENST00000636964 FRRS1Q6ZNA5 592 aa10.66□□□□□ -0.7
CLN6-217ENST00000636964 RDH10Q8IZV5 341 aa10.66□□□□□ -0.7
CLN6-217ENST00000636964 OR52P1PQ8NH57 321 aa10.66□□□□□ -0.7
CLN6-217ENST00000636964 TMCO6Q96DC7 493 aa10.66□□□□□ -0.7
CLN6-217ENST00000636964 OR5M11Q96RB7 305 aa10.66□□□□□ -0.7
CLN6-217ENST00000636964 GABARAPL3Q9BY60 117 aa10.66□□□□□ -0.7
CLN6-217ENST00000636964 ZNF275Q9NSD4 429 aaPredicted RBP10.66□□□□□ -0.7
CLN6-217ENST00000636964 PTGFRNQ9P2B2 879 aa10.66□□□□□ -0.7
CLN6-217ENST00000636964 SH3BGRL2Q9UJC5 107 aa10.66□□□□□ -0.7
CLN6-217ENST00000636964 SLC13A4Q9UKG4 626 aa10.66□□□□□ -0.7
CLN6-217ENST00000636964 WDR45Q9Y484 360 aa10.66□□□□□ -0.7
CLN6-217ENST00000636964 PI4KAP42356 2102 aa10.65□□□□□ -0.7
CLN6-217ENST00000636964 ZDBF2Q9HCK1 2354 aa10.65□□□□□ -0.7
CLN6-217ENST00000636964 CPSF4LA6NMK7 179 aaKnown RBP10.65□□□□□ -0.7
CLN6-217ENST00000636964 MRPS14O60783 128 aaKnown RBP10.65□□□□□ -0.7
CLN6-217ENST00000636964 PSKH1P11801 424 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms