RNA–Protein interactions for RNA: ENST00000636876.1

CLN6-216, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 655 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-216ENST00000636876 CHERPQ8IWX8 916 aaKnown RBP14.48□□□□□ -0.09
CLN6-216ENST00000636876 ULK2Q8IYT8 1036 aa14.48□□□□□ -0.09
CLN6-216ENST00000636876 ST6GALNAC3Q8NDV1 305 aa14.48□□□□□ -0.09
CLN6-216ENST00000636876 OR52E4Q8NGH9 312 aa14.48□□□□□ -0.09
CLN6-216ENST00000636876 OR4D11Q8NGI4 311 aa14.48□□□□□ -0.09
CLN6-216ENST00000636876 OR5M1Q8NGP8 315 aa14.48□□□□□ -0.09
CLN6-216ENST00000636876 OR10Q1Q8NGQ4 319 aa14.48□□□□□ -0.09
CLN6-216ENST00000636876 ZNF563Q8TA94 476 aa14.48□□□□□ -0.09
CLN6-216ENST00000636876 POC1BQ8TC44 478 aa14.48□□□□□ -0.09
CLN6-216ENST00000636876 TMEM234Q8WY98 164 aa14.48□□□□□ -0.09
CLN6-216ENST00000636876 MIB2Q96AX9 1013 aa14.48□□□□□ -0.09
CLN6-216ENST00000636876 ASB9Q96DX5 294 aa14.48□□□□□ -0.09
CLN6-216ENST00000636876 TPD52L3Q96J77 140 aa14.48□□□□□ -0.09
CLN6-216ENST00000636876 MRGPRX4Q96LA9 322 aa14.48□□□□□ -0.09
CLN6-216ENST00000636876 NSMCE2Q96MF7 247 aa14.48□□□□□ -0.09
CLN6-216ENST00000636876 PIGQQ9BRB3 760 aa14.48□□□□□ -0.09
CLN6-216ENST00000636876 SPRR3Q9UBC9 169 aa14.48□□□□□ -0.09
CLN6-216ENST00000636876 TESQ9UGI8 421 aaKnown RBP14.48□□□□□ -0.09
CLN6-216ENST00000636876 RPS6KA6Q9UK32 745 aa14.48□□□□□ -0.09
CLN6-216ENST00000636876 SLC9A8Q9Y2E8 581 aa14.48□□□□□ -0.09
CLN6-216ENST00000636876 POLEQ07864 2286 aa14.47□□□□□ -0.09
CLN6-216ENST00000636876 A0A1B0GTH9 108 aa14.47□□□□□ -0.09
CLN6-216ENST00000636876 WISP1O95388 367 aa14.47□□□□□ -0.09
CLN6-216ENST00000636876 TNFRSF1BP20333 461 aa14.47□□□□□ -0.09
CLN6-216ENST00000636876 ATP6V1B2P21281 511 aa14.47□□□□□ -0.09
CLN6-216ENST00000636876 CHMP24386 653 aa14.47□□□□□ -0.09
CLN6-216ENST00000636876 PSMA4P25789 261 aaKnown RBP14.47□□□□□ -0.09
CLN6-216ENST00000636876 MS4A2Q01362 244 aa14.47□□□□□ -0.09
CLN6-216ENST00000636876 NHSL2Q5HYW2 709 aa14.47□□□□□ -0.09
CLN6-216ENST00000636876 LCN8Q6JVE9 175 aa14.47□□□□□ -0.09
CLN6-216ENST00000636876 AAGABQ6PD74 315 aa14.47□□□□□ -0.09
CLN6-216ENST00000636876 FGD2Q7Z6J4 655 aa14.47□□□□□ -0.09
CLN6-216ENST00000636876 VTCN1Q7Z7D3 282 aa14.47□□□□□ -0.09
CLN6-216ENST00000636876 CARM1Q86X55 608 aa14.47□□□□□ -0.09
CLN6-216ENST00000636876 DHFR2Q86XF0 187 aa14.47□□□□□ -0.09
CLN6-216ENST00000636876 LACC1Q8IV20 430 aa14.47□□□□□ -0.09
CLN6-216ENST00000636876 OR6T1Q8NGN1 323 aa14.47□□□□□ -0.09
CLN6-216ENST00000636876 VANGL1Q8TAA9 524 aaPredicted RBP14.47□□□□□ -0.09
CLN6-216ENST00000636876 HSH2DQ96JZ2 352 aa14.47□□□□□ -0.09
CLN6-216ENST00000636876 ZNF559Q9BR84 538 aa14.47□□□□□ -0.09
CLN6-216ENST00000636876 SAMD4AQ9UPU9 718 aaKnown RBP14.47□□□□□ -0.09
CLN6-216ENST00000636876 SH3GLB1Q9Y371 365 aa14.47□□□□□ -0.09
CLN6-216ENST00000636876 GTF3C1Q12789 2109 aa14.47□□□□□ -0.09
CLN6-216ENST00000636876 OR14I1A6ND48 311 aa14.46□□□□□ -0.09
CLN6-216ENST00000636876 LINC01387J3KSC0 135 aa14.46□□□□□ -0.09
CLN6-216ENST00000636876 ACOT8O14734 319 aa14.46□□□□□ -0.09
CLN6-216ENST00000636876 FMO6PO60774 539 aa14.46□□□□□ -0.09
CLN6-216ENST00000636876 ACTL6AO96019 429 aa14.46□□□□□ -0.09
CLN6-216ENST00000636876 BMP7P18075 431 aa14.46□□□□□ -0.09
CLN6-216ENST00000636876 ELK4P28324 431 aa14.46□□□□□ -0.09
CLN6-216ENST00000636876 ADH6P28332 368 aa14.46□□□□□ -0.09
CLN6-216ENST00000636876 SLC1A3P43003 542 aa14.46□□□□□ -0.09
CLN6-216ENST00000636876 COPZ1P61923 177 aa14.46□□□□□ -0.09
CLN6-216ENST00000636876 CRYZQ08257 329 aaKnown RBP14.46□□□□□ -0.09
CLN6-216ENST00000636876 MERTKQ12866 999 aa14.46□□□□□ -0.09
CLN6-216ENST00000636876 TRAP1Q12931 704 aaKnown RBP14.46□□□□□ -0.09
CLN6-216ENST00000636876 NPTX1Q15818 432 aa14.46□□□□□ -0.09
CLN6-216ENST00000636876 IFI44LQ53G44 452 aa14.46□□□□□ -0.09
CLN6-216ENST00000636876 MTX3Q5HYI7 312 aa14.46□□□□□ -0.09
CLN6-216ENST00000636876 VASNQ6EMK4 673 aa14.46□□□□□ -0.09
CLN6-216ENST00000636876 WBP2NLQ6ICG8 309 aa14.46□□□□□ -0.09
CLN6-216ENST00000636876 CYP2R1Q6VVX0 501 aa14.46□□□□□ -0.09
CLN6-216ENST00000636876 PLEKHM3Q6ZWE6 761 aa14.46□□□□□ -0.09
CLN6-216ENST00000636876 GRINAQ7Z429 371 aa14.46□□□□□ -0.09
CLN6-216ENST00000636876 YTHDF3Q7Z739 585 aaKnown RBP14.46□□□□□ -0.09
CLN6-216ENST00000636876 RANBP3LQ86VV4 465 aaPredicted RBP14.46□□□□□ -0.09
CLN6-216ENST00000636876 RBM45Q8IUH3 476 aaKnown RBP14.46□□□□□ -0.09
CLN6-216ENST00000636876 CADM2Q8N3J6 435 aa14.46□□□□□ -0.09
CLN6-216ENST00000636876 GEMIN6Q8WXD5 167 aaKnown RBP14.46□□□□□ -0.09
CLN6-216ENST00000636876 ABTB1Q969K4 478 aaPredicted RBP14.46□□□□□ -0.09
CLN6-216ENST00000636876 UGT2B28Q9BY64 529 aa14.46□□□□□ -0.09
CLN6-216ENST00000636876 TRIM2Q9C040 744 aa14.46□□□□□ -0.09
CLN6-216ENST00000636876 MMADHCQ9H3L0 296 aaPredicted RBP14.46□□□□□ -0.09
CLN6-216ENST00000636876 ZNF337Q9Y3M9 751 aa14.46□□□□□ -0.09
CLN6-216ENST00000636876 DOPEY2Q9Y3R5 2298 aa14.46□□□□□ -0.09
CLN6-216ENST00000636876 ZNHIT1O43257 154 aa14.45□□□□□ -0.1
CLN6-216ENST00000636876 TPST2O60704 377 aa14.45□□□□□ -0.1
CLN6-216ENST00000636876 PRKD3O94806 890 aa14.45□□□□□ -0.1
CLN6-216ENST00000636876 STAMBPO95630 424 aa14.45□□□□□ -0.1
CLN6-216ENST00000636876 HTR2AP28223 471 aa14.45□□□□□ -0.1
CLN6-216ENST00000636876 PTGS2P35354 604 aa14.45□□□□□ -0.1
CLN6-216ENST00000636876 HTR3AP46098 478 aa14.45□□□□□ -0.1
CLN6-216ENST00000636876 OR1E2P47887 323 aa14.45□□□□□ -0.1
CLN6-216ENST00000636876 DCST1Q5T197 706 aa14.45□□□□□ -0.1
CLN6-216ENST00000636876 ENPP6Q6UWR7 440 aa14.45□□□□□ -0.1
CLN6-216ENST00000636876 FKBP9P1Q75LS8 142 aa14.45□□□□□ -0.1
CLN6-216ENST00000636876 FAM86B1Q8N7N1 296 aa14.45□□□□□ -0.1
CLN6-216ENST00000636876 LSMEM1Q8N8F7 131 aa14.45□□□□□ -0.1
CLN6-216ENST00000636876 GALNT11Q8NCW6 608 aa14.45□□□□□ -0.1
CLN6-216ENST00000636876 SARAFQ96BY9 339 aa14.45□□□□□ -0.1
CLN6-216ENST00000636876 MCHR1Q99705 422 aa14.45□□□□□ -0.1
CLN6-216ENST00000636876 TIMP4Q99727 224 aa14.45□□□□□ -0.1
CLN6-216ENST00000636876 PRR14Q9BWN1 585 aa14.45□□□□□ -0.1
CLN6-216ENST00000636876 ADAM19Q9H013 955 aa14.45□□□□□ -0.1
CLN6-216ENST00000636876 TNFRSF10DQ9UBN6 386 aa14.45□□□□□ -0.1
CLN6-216ENST00000636876 RPS6KB2Q9UBS0 482 aa14.45□□□□□ -0.1
CLN6-216ENST00000636876 SLC7A8Q9UHI5 535 aa14.45□□□□□ -0.1
CLN6-216ENST00000636876 POMPQ9Y244 141 aa14.45□□□□□ -0.1
CLN6-216ENST00000636876 A0A1B0GWA3 101 aa14.44□□□□□ -0.1
CLN6-216ENST00000636876 CYSRT1A8MQ03 144 aa14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms