RNA–Protein interactions for RNA: ENST00000636843.1

CTSD-208, Transcript of cathepsin D, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTSD, Length 1,512 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-208ENST00000636843 MAP1AP78559 2803 aaPredicted RBP11.46□□□□□ -0.57
CTSD-208ENST00000636843 A0A1W2PS29 197 aa11.45□□□□□ -0.58
CTSD-208ENST00000636843 MBD3L4A6NDZ8 208 aaPredicted RBP11.45□□□□□ -0.58
CTSD-208ENST00000636843 MBD3L3A6NE82 208 aaPredicted RBP11.45□□□□□ -0.58
CTSD-208ENST00000636843 TUBAL3A6NHL2 446 aa11.45□□□□□ -0.58
CTSD-208ENST00000636843 MBD3L5A6NJ08 208 aaPredicted RBP11.45□□□□□ -0.58
CTSD-208ENST00000636843 PLOD2O00469 737 aa11.45□□□□□ -0.58
CTSD-208ENST00000636843 E2F6O75461 281 aa11.45□□□□□ -0.58
CTSD-208ENST00000636843 SNAP29O95721 258 aa11.45□□□□□ -0.58
CTSD-208ENST00000636843 IL18BPO95998 194 aa11.45□□□□□ -0.58
CTSD-208ENST00000636843 FABP3P05413 133 aa11.45□□□□□ -0.58
CTSD-208ENST00000636843 TFAP2AP05549 437 aa11.45□□□□□ -0.58
CTSD-208ENST00000636843 CT62P0C5K7 136 aa11.45□□□□□ -0.58
CTSD-208ENST00000636843 CPMP14384 443 aa11.45□□□□□ -0.58
CTSD-208ENST00000636843 FOSL1P15407 271 aa11.45□□□□□ -0.58
CTSD-208ENST00000636843 PORP16435 677 aaPredicted RBP11.45□□□□□ -0.58
CTSD-208ENST00000636843 BMP7P18075 431 aa11.45□□□□□ -0.58
CTSD-208ENST00000636843 NT5EP21589 574 aa11.45□□□□□ -0.58
CTSD-208ENST00000636843 UQCRC2P22695 453 aa11.45□□□□□ -0.58
CTSD-208ENST00000636843 ABCD3P28288 659 aa11.45□□□□□ -0.58
CTSD-208ENST00000636843 OPRM1P35372 400 aa11.45□□□□□ -0.58
CTSD-208ENST00000636843 ARHGDIAP52565 204 aa11.45□□□□□ -0.58
CTSD-208ENST00000636843 TUBA4AP68366 448 aa11.45□□□□□ -0.58
CTSD-208ENST00000636843 SORDQ00796 357 aa11.45□□□□□ -0.58
CTSD-208ENST00000636843 TOMM20Q15388 145 aa11.45□□□□□ -0.58
CTSD-208ENST00000636843 EIPR1Q53HC9 387 aa11.45□□□□□ -0.58
CTSD-208ENST00000636843 GCNT6Q5T4J0 391 aa11.45□□□□□ -0.58
CTSD-208ENST00000636843 FOXB2Q5VYV0 432 aa11.45□□□□□ -0.58
CTSD-208ENST00000636843 TTC23Q5W5X9 447 aa11.45□□□□□ -0.58
CTSD-208ENST00000636843 TMEM81Q6P7N7 255 aa11.45□□□□□ -0.58
CTSD-208ENST00000636843 TTC33Q6PID6 262 aaPredicted RBP11.45□□□□□ -0.58
CTSD-208ENST00000636843 PIWIL3Q7Z3Z3 882 aaKnown RBP11.45□□□□□ -0.58
CTSD-208ENST00000636843 MBD3L2Q8NHZ7 208 aaPredicted RBP11.45□□□□□ -0.58
CTSD-208ENST00000636843 PNPT1Q8TCS8 783 aaKnown RBP11.45□□□□□ -0.58
CTSD-208ENST00000636843 OR5P2Q8WZ92 322 aa11.45□□□□□ -0.58
CTSD-208ENST00000636843 CIDECQ96AQ7 238 aaPredicted RBP11.45□□□□□ -0.58
CTSD-208ENST00000636843 TRIB1Q96RU8 372 aa11.45□□□□□ -0.58
CTSD-208ENST00000636843 TMEM38AQ9H6F2 299 aa11.45□□□□□ -0.58
CTSD-208ENST00000636843 FREM3P0C091 2139 aa11.45□□□□□ -0.58
CTSD-208ENST00000636843 MPDZO75970 2070 aa11.45□□□□□ -0.58
CTSD-208ENST00000636843 ZNF469Q96JG9 3925 aaPredicted RBP11.45□□□□□ -0.58
CTSD-208ENST00000636843 GUCY1B2O75343 617 aa11.45□□□□□ -0.58
CTSD-208ENST00000636843 TNFRSF21O75509 655 aa11.45□□□□□ -0.58
CTSD-208ENST00000636843 PGM3O95394 542 aa11.45□□□□□ -0.58
CTSD-208ENST00000636843 ACTL6AO96019 429 aa11.45□□□□□ -0.58
CTSD-208ENST00000636843 S1PR1P21453 382 aa11.45□□□□□ -0.58
CTSD-208ENST00000636843 CHI3L1P36222 383 aaPredicted RBP11.45□□□□□ -0.58
CTSD-208ENST00000636843 CRATP43155 626 aa11.45□□□□□ -0.58
CTSD-208ENST00000636843 MVDP53602 400 aa11.45□□□□□ -0.58
CTSD-208ENST00000636843 PPP2R2BQ00005 443 aa11.45□□□□□ -0.58
CTSD-208ENST00000636843 FOXD4Q12950 439 aaPredicted RBP11.45□□□□□ -0.58
CTSD-208ENST00000636843 DDX59Q5T1V6 619 aaKnown RBP eCLIP11.45□□□□□ -0.584e-12■■■■■ 63.9
CTSD-208ENST00000636843 OR2T5Q6IEZ7 315 aa11.45□□□□□ -0.58
CTSD-208ENST00000636843 SLC30A6Q6NXT4 461 aa11.45□□□□□ -0.58
CTSD-208ENST00000636843 SHQ1Q6PI26 577 aaKnown RBP11.45□□□□□ -0.58
CTSD-208ENST00000636843 ANGPTL8Q6UXH0 198 aa11.45□□□□□ -0.58
CTSD-208ENST00000636843 PAMR1Q6UXH9 720 aa11.45□□□□□ -0.58
CTSD-208ENST00000636843 NUP54Q7Z3B4 507 aa11.45□□□□□ -0.58
CTSD-208ENST00000636843 PRR22Q8IZ63 422 aa11.45□□□□□ -0.58
CTSD-208ENST00000636843 VWA5B2Q8N398 1253 aa11.45□□□□□ -0.58
CTSD-208ENST00000636843 OR1J4Q8NGS1 313 aa11.45□□□□□ -0.58
CTSD-208ENST00000636843 OR2T29Q8NH02 315 aa11.45□□□□□ -0.58
CTSD-208ENST00000636843 ZPLD1Q8TCW7 415 aa11.45□□□□□ -0.58
CTSD-208ENST00000636843 NRBF2Q96F24 287 aa11.45□□□□□ -0.58
CTSD-208ENST00000636843 GABARAPL1Q9H0R8 117 aa11.45□□□□□ -0.58
CTSD-208ENST00000636843 NXF5Q9H1B4 397 aaKnown RBP11.45□□□□□ -0.58
CTSD-208ENST00000636843 METTL7AQ9H8H3 244 aa11.45□□□□□ -0.58
CTSD-208ENST00000636843 NEUROD4Q9HD90 331 aa11.45□□□□□ -0.58
CTSD-208ENST00000636843 JKAMPQ9P055 326 aa11.45□□□□□ -0.58
CTSD-208ENST00000636843 UTS2RQ9UKP6 389 aa11.45□□□□□ -0.58
CTSD-208ENST00000636843 NIPBLQ6KC79 2804 aaeCLIP11.44□□□□□ -0.58
CTSD-208ENST00000636843 A0A087WXM4 84 aa11.44□□□□□ -0.58
CTSD-208ENST00000636843 EEF1E1-BLOC1S5C9J1V9 151 aa11.44□□□□□ -0.58
CTSD-208ENST00000636843 GNB5O14775 395 aa11.44□□□□□ -0.58
CTSD-208ENST00000636843 PDPK1O15530 556 aa11.44□□□□□ -0.58
CTSD-208ENST00000636843 EEF1E1O43324 174 aaKnown RBP11.44□□□□□ -0.58
CTSD-208ENST00000636843 PPM1BO75688 479 aa11.44□□□□□ -0.58
CTSD-208ENST00000636843 C1QCP02747 245 aa11.44□□□□□ -0.58
CTSD-208ENST00000636843 RAF1P04049 648 aa11.44□□□□□ -0.58
CTSD-208ENST00000636843 GNAO1P09471 354 aa11.44□□□□□ -0.58
CTSD-208ENST00000636843 DRD2P14416 443 aa11.44□□□□□ -0.58
CTSD-208ENST00000636843 CPN1P15169 458 aa11.44□□□□□ -0.58
CTSD-208ENST00000636843 ATP6V1B1P15313 513 aa11.44□□□□□ -0.58
CTSD-208ENST00000636843 HOXB4P17483 251 aaPredicted RBP11.44□□□□□ -0.58
CTSD-208ENST00000636843 FRKP42685 505 aaPredicted RBP11.44□□□□□ -0.58
CTSD-208ENST00000636843 RAD23AP54725 363 aa11.44□□□□□ -0.58
CTSD-208ENST00000636843 MAP4K2Q12851 820 aa11.44□□□□□ -0.58
CTSD-208ENST00000636843 WIPI1Q5MNZ9 446 aaPredicted RBP11.44□□□□□ -0.58
CTSD-208ENST00000636843 CCDC80Q76M96 950 aa11.44□□□□□ -0.58
CTSD-208ENST00000636843 FAM83FQ8NEG4 500 aaPredicted RBP11.44□□□□□ -0.58
CTSD-208ENST00000636843 ZNF555Q8NEP9 628 aa11.44□□□□□ -0.58
CTSD-208ENST00000636843 HSH2DQ96JZ2 352 aa11.44□□□□□ -0.58
CTSD-208ENST00000636843 YIPF3Q9GZM5 350 aa11.44□□□□□ -0.58
CTSD-208ENST00000636843 DLL4Q9NR61 685 aa11.44□□□□□ -0.58
CTSD-208ENST00000636843 TAS2R7Q9NYW3 318 aa11.44□□□□□ -0.58
CTSD-208ENST00000636843 CES1P1Q9UKY3 287 aa11.44□□□□□ -0.58
CTSD-208ENST00000636843 ORC6Q9Y5N6 252 aa11.44□□□□□ -0.58
CTSD-208ENST00000636843 TRIM64A6NGJ6 449 aa11.43□□□□□ -0.58
CTSD-208ENST00000636843 SNPHO15079 494 aa11.43□□□□□ -0.58
CTSD-208ENST00000636843 IFNA14P01570 189 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms