RNA–Protein interactions for RNA: ENST00000635750.1

SCN1A-209, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SCN1A, Length 8,299 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-209ENST00000635750 SIRPAP78324 504 aa5.22□□□□□ -1.57
SCN1A-209ENST00000635750 UBE2NLQ5JXB2 153 aa5.22□□□□□ -1.57
SCN1A-209ENST00000635750 CATSPERDQ86XM0 798 aa5.22□□□□□ -1.57
SCN1A-209ENST00000635750 MISPQ8IVT2 679 aa5.22□□□□□ -1.57
SCN1A-209ENST00000635750 SLC35G3Q8N808 338 aa5.22□□□□□ -1.57
SCN1A-209ENST00000635750 KDF1Q8NAX2 398 aaPredicted RBP5.22□□□□□ -1.57
SCN1A-209ENST00000635750 MDGA1Q8NFP4 955 aa5.22□□□□□ -1.57
SCN1A-209ENST00000635750 DPF1Q92782 380 aa5.22□□□□□ -1.57
SCN1A-209ENST00000635750 PINK1Q9BXM7 581 aa5.22□□□□□ -1.57
SCN1A-209ENST00000635750 EBF2Q9HAK2 575 aa5.22□□□□□ -1.57
SCN1A-209ENST00000635750 PREBQ9HCU5 417 aa5.22□□□□□ -1.57
SCN1A-209ENST00000635750 OBP2AQ9NY56 170 aa5.22□□□□□ -1.57
SCN1A-209ENST00000635750 SLC2A6Q9UGQ3 507 aa5.22□□□□□ -1.57
SCN1A-209ENST00000635750 PTBP2Q9UKA9 531 aaKnown RBP5.22□□□□□ -1.57
SCN1A-209ENST00000635750 RNF24Q9Y225 148 aa5.22□□□□□ -1.57
SCN1A-209ENST00000635750 RASD1Q9Y272 281 aa5.22□□□□□ -1.57
SCN1A-209ENST00000635750 SCGB1D1O95968 90 aa5.22□□□□□ -1.57
SCN1A-209ENST00000635750 CT45A10P0DMU9 189 aa5.22□□□□□ -1.57
SCN1A-209ENST00000635750 RAB5CP51148 216 aa5.22□□□□□ -1.57
SCN1A-209ENST00000635750 ACTBL2Q562R1 376 aa5.22□□□□□ -1.57
SCN1A-209ENST00000635750 EPGNQ6UW88 154 aa5.22□□□□□ -1.57
SCN1A-209ENST00000635750 RTL10Q7L3V2 364 aa5.22□□□□□ -1.57
SCN1A-209ENST00000635750 OR14A16Q8NHC5 309 aa5.22□□□□□ -1.57
SCN1A-209ENST00000635750 EDAQ92838 391 aa5.22□□□□□ -1.57
SCN1A-209ENST00000635750 ZNF583Q96ND8 569 aa5.22□□□□□ -1.57
SCN1A-209ENST00000635750 VN1R3Q9BXE9 311 aa5.22□□□□□ -1.57
SCN1A-209ENST00000635750 SYNPO2LQ9H987 977 aa5.22□□□□□ -1.57
SCN1A-209ENST00000635750 ATP13A2Q9NQ11 1180 aa5.22□□□□□ -1.57
SCN1A-209ENST00000635750 NXT1Q9UKK6 140 aaKnown RBP5.22□□□□□ -1.57
SCN1A-209ENST00000635750 PUS1Q9Y606 427 aaKnown RBP eCLIP5.22□□□□□ -1.57
SCN1A-209ENST00000635750 SPEF2Q9C093 1822 aa5.22□□□□□ -1.57
SCN1A-209ENST00000635750 LRIT2A6NDA9 550 aa5.22□□□□□ -1.57
SCN1A-209ENST00000635750 ITM2AO43736 263 aa5.22□□□□□ -1.57
SCN1A-209ENST00000635750 SRPX2O60687 465 aaPredicted RBP5.22□□□□□ -1.57
SCN1A-209ENST00000635750 GALR3O60755 368 aaPredicted RBP5.22□□□□□ -1.57
SCN1A-209ENST00000635750 SCRG1O75711 98 aa5.22□□□□□ -1.57
SCN1A-209ENST00000635750 TGM1P22735 817 aa5.22□□□□□ -1.57
SCN1A-209ENST00000635750 NR4A2P43354 598 aa5.22□□□□□ -1.57
SCN1A-209ENST00000635750 CARD18P57730 90 aa5.22□□□□□ -1.57
SCN1A-209ENST00000635750 PAGE3Q5JUK9 113 aa5.22□□□□□ -1.57
SCN1A-209ENST00000635750 FAM182AQ5T1J6 154 aa5.22□□□□□ -1.57
SCN1A-209ENST00000635750 WBP2NLQ6ICG8 309 aa5.22□□□□□ -1.57
SCN1A-209ENST00000635750 FAM111BQ6SJ93 734 aa5.22□□□□□ -1.57
SCN1A-209ENST00000635750 FITM2Q8N6M3 262 aa5.22□□□□□ -1.57
SCN1A-209ENST00000635750 ZNF321PQ8N8H1 164 aa5.22□□□□□ -1.57
SCN1A-209ENST00000635750 RHEBL1Q8TAI7 183 aa5.22□□□□□ -1.57
SCN1A-209ENST00000635750 ZNF845Q96IR2 970 aaPredicted RBP5.22□□□□□ -1.57
SCN1A-209ENST00000635750 OR6C1Q96RD1 312 aa5.22□□□□□ -1.57
SCN1A-209ENST00000635750 KCNA7Q96RP8 456 aa5.22□□□□□ -1.57
SCN1A-209ENST00000635750 OR2B2Q9GZK3 357 aa5.22□□□□□ -1.57
SCN1A-209ENST00000635750 RIMS4Q9H426 269 aaPredicted RBP5.22□□□□□ -1.57
SCN1A-209ENST00000635750 CALHM2Q9HA72 323 aa5.22□□□□□ -1.57
SCN1A-209ENST00000635750 PATZ1Q9HBE1 687 aaKnown RBP5.22□□□□□ -1.57
SCN1A-209ENST00000635750 KCND1Q9NSA2 647 aa5.22□□□□□ -1.57
SCN1A-209ENST00000635750 LUZP4Q9P127 313 aa5.22□□□□□ -1.57
SCN1A-209ENST00000635750 ZCWPW2A0A1B0GU75 182 aa5.22□□□□□ -1.57
SCN1A-209ENST00000635750 XKRY2A2RUG3 117 aa5.22□□□□□ -1.57
SCN1A-209ENST00000635750 PEX10O60683 326 aa5.22□□□□□ -1.57
SCN1A-209ENST00000635750 RFPL2O75678 378 aa5.22□□□□□ -1.57
SCN1A-209ENST00000635750 DDAH2O95865 285 aa5.22□□□□□ -1.57
SCN1A-209ENST00000635750 POU2F2P09086 479 aa5.22□□□□□ -1.57
SCN1A-209ENST00000635750 SLC35E2BP0CK96 405 aa5.22□□□□□ -1.57
SCN1A-209ENST00000635750 ETV6P41212 452 aa5.22□□□□□ -1.57
SCN1A-209ENST00000635750 BMXP51813 675 aa5.22□□□□□ -1.57
SCN1A-209ENST00000635750 EDDM3BP56851 147 aa5.22□□□□□ -1.57
SCN1A-209ENST00000635750 ZNF280AP59817 542 aaPredicted RBP5.22□□□□□ -1.57
SCN1A-209ENST00000635750 GRB2P62993 217 aaKnown RBP5.22□□□□□ -1.57
SCN1A-209ENST00000635750 TMEM41BQ5BJD5 291 aa5.22□□□□□ -1.57
SCN1A-209ENST00000635750 C19orf35Q6ZS72 473 aa5.22□□□□□ -1.57
SCN1A-209ENST00000635750 ZBED3Q96IU2 234 aaPredicted RBP5.22□□□□□ -1.57
SCN1A-209ENST00000635750 C12orf42Q96LP6 360 aa5.22□□□□□ -1.57
SCN1A-209ENST00000635750 ZNF597Q96LX8 424 aa5.22□□□□□ -1.57
SCN1A-209ENST00000635750 PIGQQ9BRB3 760 aa5.22□□□□□ -1.57
SCN1A-209ENST00000635750 ALG8Q9BVK2 526 aa5.22□□□□□ -1.57
SCN1A-209ENST00000635750 SGPP1Q9BX95 441 aa5.22□□□□□ -1.57
SCN1A-209ENST00000635750 PECRQ9BY49 303 aa5.22□□□□□ -1.57
SCN1A-209ENST00000635750 ZNF436Q9C0F3 470 aaPredicted RBP5.22□□□□□ -1.57
SCN1A-209ENST00000635750 ABCG5Q9H222 651 aa5.22□□□□□ -1.57
SCN1A-209ENST00000635750 C14orf119Q9NWQ9 140 aa5.22□□□□□ -1.57
SCN1A-209ENST00000635750 KCMF1Q9P0J7 381 aa5.22□□□□□ -1.57
SCN1A-209ENST00000635750 SIX4Q9UIU6 781 aa5.22□□□□□ -1.57
SCN1A-209ENST00000635750 ATP23Q9Y6H3 246 aa5.22□□□□□ -1.57
SCN1A-209ENST00000635750 NAP1L6A6NFF2 107 aa5.22□□□□□ -1.57
SCN1A-209ENST00000635750 FAM159BA6NKW6 160 aa5.22□□□□□ -1.57
SCN1A-209ENST00000635750 AGAP14A8MT82 685 aa5.22□□□□□ -1.57
SCN1A-209ENST00000635750 TPOP07202 933 aa5.22□□□□□ -1.57
SCN1A-209ENST00000635750 CTRB1P17538 263 aa5.22□□□□□ -1.57
SCN1A-209ENST00000635750 SLC35A1P78382 337 aa5.22□□□□□ -1.57
SCN1A-209ENST00000635750 MRPS21P82921 87 aaKnown RBP5.22□□□□□ -1.57
SCN1A-209ENST00000635750 PPP1R8Q12972 351 aaKnown RBP5.22□□□□□ -1.57
SCN1A-209ENST00000635750 KHDC1Q4VXA5 237 aaKnown RBP5.22□□□□□ -1.57
SCN1A-209ENST00000635750 VWA2Q5GFL6 755 aa5.22□□□□□ -1.57
SCN1A-209ENST00000635750 CTRB2Q6GPI1 263 aa5.22□□□□□ -1.57
SCN1A-209ENST00000635750 TMEM184AQ6ZMB5 413 aa5.22□□□□□ -1.57
SCN1A-209ENST00000635750 IDO2Q6ZQW0 420 aa5.22□□□□□ -1.57
SCN1A-209ENST00000635750 FJX1Q86VR8 437 aa5.22□□□□□ -1.57
SCN1A-209ENST00000635750 KRTCAP2Q8N6L1 136 aa5.22□□□□□ -1.57
SCN1A-209ENST00000635750 DTX3Q8N9I9 347 aa5.22□□□□□ -1.57
SCN1A-209ENST00000635750 ANKLE1Q8NAG6 615 aa5.22□□□□□ -1.57
SCN1A-209ENST00000635750 OR5D16Q8NGK9 328 aa5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms