RNA–Protein interactions for RNA: ENST00000635578.1

SMARCB1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 242 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-209ENST00000635578 HNRNPFP52597 415 aaKnown RBP0.8□□□□□ -2.28
SMARCB1-209ENST00000635578 DIO3P55073 304 aa0.8□□□□□ -2.28
SMARCB1-209ENST00000635578 PRMT2P55345 433 aa0.8□□□□□ -2.28
SMARCB1-209ENST00000635578 UCP2P55851 309 aa0.8□□□□□ -2.28
SMARCB1-209ENST00000635578 KIAA1024LP59773 190 aa0.8□□□□□ -2.28
SMARCB1-209ENST00000635578 ERVPABLB-1P60509 514 aa0.8□□□□□ -2.28
SMARCB1-209ENST00000635578 CCZ1BP86790 482 aa0.8□□□□□ -2.28
SMARCB1-209ENST00000635578 CCZ1P86791 482 aaPredicted RBP0.8□□□□□ -2.28
SMARCB1-209ENST00000635578 PUDPQ08623 228 aa0.8□□□□□ -2.28
SMARCB1-209ENST00000635578 CBX3Q13185 183 aa0.8□□□□□ -2.28
SMARCB1-209ENST00000635578 GPM6BQ13491 265 aa0.8□□□□□ -2.28
SMARCB1-209ENST00000635578 PDE7AQ13946 482 aa0.8□□□□□ -2.28
SMARCB1-209ENST00000635578 MORF4L2Q15014 288 aa0.8□□□□□ -2.28
SMARCB1-209ENST00000635578 KIAA0040Q15053 153 aa0.8□□□□□ -2.28
SMARCB1-209ENST00000635578 RAB35Q15286 201 aa0.8□□□□□ -2.28
SMARCB1-209ENST00000635578 SF3A2Q15428 464 aaKnown RBP0.8□□□□□ -2.28
SMARCB1-209ENST00000635578 ZIC1Q15915 447 aa0.8□□□□□ -2.28
SMARCB1-209ENST00000635578 KYAT1Q16773 422 aa0.8□□□□□ -2.28
SMARCB1-209ENST00000635578 HAGHQ16775 308 aa0.8□□□□□ -2.28
SMARCB1-209ENST00000635578 ISXQ2M1V0 245 aa0.8□□□□□ -2.28
SMARCB1-209ENST00000635578 C17orf58Q2M2W7 97 aa0.8□□□□□ -2.28
SMARCB1-209ENST00000635578 HFEQ30201 348 aa0.8□□□□□ -2.28
SMARCB1-209ENST00000635578 HSDL1Q3SXM5 330 aa0.8□□□□□ -2.28
SMARCB1-209ENST00000635578 EPC2Q52LR7 807 aa0.8□□□□□ -2.28
SMARCB1-209ENST00000635578 PRR30Q53SZ7 412 aaPredicted RBP0.8□□□□□ -2.28
SMARCB1-209ENST00000635578 PAN3Q58A45 887 aaKnown RBP0.8□□□□□ -2.28
SMARCB1-209ENST00000635578 HERC4Q5GLZ8 1057 aaPredicted RBP0.8□□□□□ -2.28
SMARCB1-209ENST00000635578 PRAMEF7Q5VXH5 474 aa0.8□□□□□ -2.28
SMARCB1-209ENST00000635578 LIPKQ5VXJ0 399 aa0.8□□□□□ -2.28
SMARCB1-209ENST00000635578 NKAIN2Q5VXU1 208 aa0.8□□□□□ -2.28
SMARCB1-209ENST00000635578 SLC22A10Q63ZE4 541 aa0.8□□□□□ -2.28
SMARCB1-209ENST00000635578 ETFRF1Q6IPR1 90 aa0.8□□□□□ -2.28
SMARCB1-209ENST00000635578 CGB2Q6NT52 195 aa0.8□□□□□ -2.28
SMARCB1-209ENST00000635578 SCYL2Q6P3W7 929 aa0.8□□□□□ -2.28
SMARCB1-209ENST00000635578 IGFL3Q6UXB1 125 aa0.8□□□□□ -2.28
SMARCB1-209ENST00000635578 ADAMTSL5Q6ZMM2 481 aa0.8□□□□□ -2.28
SMARCB1-209ENST00000635578 DPY19L2P2Q6ZN68 376 aa0.8□□□□□ -2.28
SMARCB1-209ENST00000635578 GCNT7Q6ZNI0 430 aa0.8□□□□□ -2.28
SMARCB1-209ENST00000635578 Q6ZS52 159 aa0.8□□□□□ -2.28
SMARCB1-209ENST00000635578 TMEM179Q6ZVK1 233 aa0.8□□□□□ -2.28
SMARCB1-209ENST00000635578 MOB1BQ7L9L4 216 aa0.8□□□□□ -2.28
SMARCB1-209ENST00000635578 PRSS42Q7Z5A4 293 aa0.8□□□□□ -2.28
SMARCB1-209ENST00000635578 TMEM179BQ7Z7N9 219 aa0.8□□□□□ -2.28
SMARCB1-209ENST00000635578 TMEM110Q86TL2 294 aa0.8□□□□□ -2.28
SMARCB1-209ENST00000635578 VASH2Q86V25 355 aa0.8□□□□□ -2.28
SMARCB1-209ENST00000635578 PEX5LQ8IYB4 626 aa0.8□□□□□ -2.28
SMARCB1-209ENST00000635578 UBQLNLQ8IYU4 475 aa0.8□□□□□ -2.28
SMARCB1-209ENST00000635578 SFRP1Q8N474 314 aa0.8□□□□□ -2.28
SMARCB1-209ENST00000635578 LRRC17Q8N6Y2 441 aa0.8□□□□□ -2.28
SMARCB1-209ENST00000635578 SIDT2Q8NBJ9 832 aaKnown RBP0.8□□□□□ -2.28
SMARCB1-209ENST00000635578 MSANTD4Q8NCY6 345 aa0.8□□□□□ -2.28
SMARCB1-209ENST00000635578 OR4F17Q8NGA8 305 aa0.8□□□□□ -2.28
SMARCB1-209ENST00000635578 RNASE8Q8TDE3 154 aaKnown RBP0.8□□□□□ -2.28
SMARCB1-209ENST00000635578 GTSF1Q8WW33 167 aa0.8□□□□□ -2.28
SMARCB1-209ENST00000635578 FCGR1BQ92637 280 aa0.8□□□□□ -2.28
SMARCB1-209ENST00000635578 KRT35Q92764 455 aa0.8□□□□□ -2.28
SMARCB1-209ENST00000635578 BCL2L2Q92843 193 aaPredicted RBP0.8□□□□□ -2.28
SMARCB1-209ENST00000635578 ATP6V0A1Q93050 837 aa0.8□□□□□ -2.28
SMARCB1-209ENST00000635578 TMEM45BQ96B21 275 aa0.8□□□□□ -2.28
SMARCB1-209ENST00000635578 DNAJA3Q96EY1 480 aa0.8□□□□□ -2.28
SMARCB1-209ENST00000635578 DHTKD1Q96HY7 919 aaPredicted RBP0.8□□□□□ -2.28
SMARCB1-209ENST00000635578 VPS39Q96JC1 886 aa0.8□□□□□ -2.28
SMARCB1-209ENST00000635578 ELMO2Q96JJ3 720 aa0.8□□□□□ -2.28
SMARCB1-209ENST00000635578 C9orf85Q96MD7 179 aa0.8□□□□□ -2.28
SMARCB1-209ENST00000635578 GLT1D1Q96MS3 346 aa0.8□□□□□ -2.28
SMARCB1-209ENST00000635578 SPATA13Q96N96 652 aa0.8□□□□□ -2.28
SMARCB1-209ENST00000635578 OR4F4Q96R69 305 aa0.8□□□□□ -2.28
SMARCB1-209ENST00000635578 TAAR1Q96RJ0 339 aa0.8□□□□□ -2.28
SMARCB1-209ENST00000635578 RANBP9Q96S59 729 aa0.8□□□□□ -2.28
SMARCB1-209ENST00000635578 NAP1L3Q99457 506 aaPredicted RBP0.8□□□□□ -2.28
SMARCB1-209ENST00000635578 SDHCQ99643 169 aaPredicted RBP0.8□□□□□ -2.28
SMARCB1-209ENST00000635578 C19orf43Q9BQ61 176 aa0.8□□□□□ -2.28
SMARCB1-209ENST00000635578 JPH2Q9BR39 696 aaPredicted RBP0.8□□□□□ -2.28
SMARCB1-209ENST00000635578 TTYH2Q9BSA4 534 aa0.8□□□□□ -2.28
SMARCB1-209ENST00000635578 CNPY3Q9BT09 278 aa0.8□□□□□ -2.28
SMARCB1-209ENST00000635578 ST6GALNAC5Q9BVH7 336 aa0.8□□□□□ -2.28
SMARCB1-209ENST00000635578 ACAT2Q9BWD1 397 aa0.8□□□□□ -2.28
SMARCB1-209ENST00000635578 NUSAP1Q9BXS6 441 aaKnown RBP0.8□□□□□ -2.28
SMARCB1-209ENST00000635578 NMUR2Q9GZQ4 415 aa0.8□□□□□ -2.28
SMARCB1-209ENST00000635578 ABCG8Q9H221 673 aa0.8□□□□□ -2.28
SMARCB1-209ENST00000635578 CARD9Q9H257 536 aa0.8□□□□□ -2.28
SMARCB1-209ENST00000635578 ALDH8A1Q9H2A2 487 aaPredicted RBP0.8□□□□□ -2.28
SMARCB1-209ENST00000635578 TSPY26PQ9H489 355 aa0.8□□□□□ -2.28
SMARCB1-209ENST00000635578 ZDHHC6Q9H6R6 413 aa0.8□□□□□ -2.28
SMARCB1-209ENST00000635578 FAM114A2Q9NRY5 505 aa0.8□□□□□ -2.28
SMARCB1-209ENST00000635578 PLSCR3Q9NRY6 295 aa0.8□□□□□ -2.28
SMARCB1-209ENST00000635578 HOMER3Q9NSC5 361 aa0.8□□□□□ -2.28
SMARCB1-209ENST00000635578 CENPMQ9NSP4 180 aa0.8□□□□□ -2.28
SMARCB1-209ENST00000635578 PIGVQ9NUD9 493 aa0.8□□□□□ -2.28
SMARCB1-209ENST00000635578 COMMD8Q9NX08 183 aa0.8□□□□□ -2.28
SMARCB1-209ENST00000635578 DUS2Q9NX74 493 aaKnown RBP0.8□□□□□ -2.28
SMARCB1-209ENST00000635578 GDAP2Q9NXN4 497 aa0.8□□□□□ -2.28
SMARCB1-209ENST00000635578 NYAP2Q9P242 653 aa0.8□□□□□ -2.28
SMARCB1-209ENST00000635578 DPM3Q9P2X0 92 aa0.8□□□□□ -2.28
SMARCB1-209ENST00000635578 MTRRQ9UBK8 725 aa0.8□□□□□ -2.28
SMARCB1-209ENST00000635578 Q9UF83 564 aa0.8□□□□□ -2.28
SMARCB1-209ENST00000635578 MLXQ9UH92 298 aa0.8□□□□□ -2.28
SMARCB1-209ENST00000635578 NOL7Q9UMY1 257 aaKnown RBP0.8□□□□□ -2.28
SMARCB1-209ENST00000635578 PRG3Q9Y2Y8 225 aaPredicted RBP0.8□□□□□ -2.28
SMARCB1-209ENST00000635578 MRPS2Q9Y399 296 aaKnown RBP0.8□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms