RNA–Protein interactions for RNA: ENST00000619035.4

TNFAIP3-209, Transcript of TNF alpha induced protein 3, humanhuman

TSL 5 BASIC

Gene TNFAIP3, Length 2,267 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-209ENST00000619035 GADD45AP24522 165 aa11.65□□□□□ -0.54
TNFAIP3-209ENST00000619035 GPR143P51810 404 aa11.65□□□□□ -0.54
TNFAIP3-209ENST00000619035 BMXP51813 675 aa11.65□□□□□ -0.54
TNFAIP3-209ENST00000619035 RAB15P59190 212 aa11.65□□□□□ -0.54
TNFAIP3-209ENST00000619035 COPZ1P61923 177 aa11.65□□□□□ -0.54
TNFAIP3-209ENST00000619035 MED22Q15528 200 aa11.65□□□□□ -0.54
TNFAIP3-209ENST00000619035 MRPL14Q6P1L8 145 aaKnown RBP11.65□□□□□ -0.54
TNFAIP3-209ENST00000619035 RASSF6Q6ZTQ3 369 aa11.65□□□□□ -0.54
TNFAIP3-209ENST00000619035 GALNT6Q8NCL4 622 aa11.65□□□□□ -0.54
TNFAIP3-209ENST00000619035 WDR36Q8NI36 951 aaKnown RBP11.65□□□□□ -0.54
TNFAIP3-209ENST00000619035 HSPBAP1Q96EW2 488 aa11.65□□□□□ -0.54
TNFAIP3-209ENST00000619035 ZBTB20Q9HC78 741 aaPredicted RBP11.65□□□□□ -0.54
TNFAIP3-209ENST00000619035 PPIEQ9UNP9 301 aaKnown RBP11.65□□□□□ -0.54
TNFAIP3-209ENST00000619035 MED31Q9Y3C7 131 aa11.65□□□□□ -0.54
TNFAIP3-209ENST00000619035 CORINQ9Y5Q5 1042 aa11.65□□□□□ -0.54
TNFAIP3-209ENST00000619035 B3GALT1Q9Y5Z6 326 aa11.65□□□□□ -0.54
TNFAIP3-209ENST00000619035 ZNF318Q5VUA4 2279 aa11.65□□□□□ -0.54
TNFAIP3-209ENST00000619035 COL27A1Q8IZC6 1860 aaPredicted RBP11.65□□□□□ -0.55
TNFAIP3-209ENST00000619035 TRBV11-1A0A0K0K1C0 115 aa11.65□□□□□ -0.55
TNFAIP3-209ENST00000619035 OIP5O43482 229 aa11.65□□□□□ -0.55
TNFAIP3-209ENST00000619035 CLPXO76031 633 aa11.65□□□□□ -0.55
TNFAIP3-209ENST00000619035 CD63P08962 238 aa11.65□□□□□ -0.55
TNFAIP3-209ENST00000619035 INHBBP09529 407 aa11.65□□□□□ -0.55
TNFAIP3-209ENST00000619035 MAKP20794 623 aa11.65□□□□□ -0.55
TNFAIP3-209ENST00000619035 STAT5AP42229 794 aa11.65□□□□□ -0.55
TNFAIP3-209ENST00000619035 SMSP52788 366 aa11.65□□□□□ -0.55
TNFAIP3-209ENST00000619035 SNRPGP62308 76 aaKnown RBP11.65□□□□□ -0.55
TNFAIP3-209ENST00000619035 IRF3Q14653 427 aa11.65□□□□□ -0.55
TNFAIP3-209ENST00000619035 SLC27A4Q6P1M0 643 aa11.65□□□□□ -0.55
TNFAIP3-209ENST00000619035 PAQR6Q6TCH4 344 aa11.65□□□□□ -0.55
TNFAIP3-209ENST00000619035 CBLN3Q6UW01 205 aa11.65□□□□□ -0.55
TNFAIP3-209ENST00000619035 SLCO6A1Q86UG4 719 aa11.65□□□□□ -0.55
TNFAIP3-209ENST00000619035 CDK20Q8IZL9 346 aa11.65□□□□□ -0.55
TNFAIP3-209ENST00000619035 SLC34A3Q8N130 599 aa11.65□□□□□ -0.55
TNFAIP3-209ENST00000619035 SLC15A4Q8N697 577 aa11.65□□□□□ -0.55
TNFAIP3-209ENST00000619035 POGLUT1Q8NBL1 392 aa11.65□□□□□ -0.55
TNFAIP3-209ENST00000619035 NFAM1Q8NET5 270 aaPredicted RBP11.65□□□□□ -0.55
TNFAIP3-209ENST00000619035 OR5M3Q8NGP4 307 aa11.65□□□□□ -0.55
TNFAIP3-209ENST00000619035 LGALS12Q96DT0 336 aa11.65□□□□□ -0.55
TNFAIP3-209ENST00000619035 TSSK6Q9BXA6 273 aa11.65□□□□□ -0.55
TNFAIP3-209ENST00000619035 C19orf25Q9UFG5 118 aaPredicted RBP11.65□□□□□ -0.55
TNFAIP3-209ENST00000619035 PCDHGA1Q9Y5H4 931 aa11.65□□□□□ -0.55
TNFAIP3-209ENST00000619035 PMF1-BGLAPU3KQ54 211 aa11.65□□□□□ -0.55
TNFAIP3-209ENST00000619035 KIF26BQ2KJY2 2108 aa11.64□□□□□ -0.55
TNFAIP3-209ENST00000619035 LOC100506127A0A0U1RQW1 187 aa11.64□□□□□ -0.55
TNFAIP3-209ENST00000619035 PMS2P1A4D2B8 440 aa11.64□□□□□ -0.55
TNFAIP3-209ENST00000619035 SH3D21A4FU49 640 aa11.64□□□□□ -0.55
TNFAIP3-209ENST00000619035 C9J4A7 227 aa11.64□□□□□ -0.55
TNFAIP3-209ENST00000619035 M0R3G1 203 aa11.64□□□□□ -0.55
TNFAIP3-209ENST00000619035 TO15178 435 aa11.64□□□□□ -0.55
TNFAIP3-209ENST00000619035 SAGP10523 405 aaPredicted RBP11.64□□□□□ -0.55
TNFAIP3-209ENST00000619035 TBXA2RP21731 343 aa11.64□□□□□ -0.55
TNFAIP3-209ENST00000619035 OPRL1P41146 370 aa11.64□□□□□ -0.55
TNFAIP3-209ENST00000619035 ETV5P41161 510 aa11.64□□□□□ -0.55
TNFAIP3-209ENST00000619035 SLC15A1P46059 708 aa11.64□□□□□ -0.55
TNFAIP3-209ENST00000619035 PCYT1AP49585 367 aa11.64□□□□□ -0.55
TNFAIP3-209ENST00000619035 NRG3P56975 720 aa11.64□□□□□ -0.55
TNFAIP3-209ENST00000619035 TEKQ02763 1124 aa11.64□□□□□ -0.55
TNFAIP3-209ENST00000619035 ZNF91Q05481 1191 aa11.64□□□□□ -0.55
TNFAIP3-209ENST00000619035 CSRP2Q16527 193 aa11.64□□□□□ -0.55
TNFAIP3-209ENST00000619035 SNAPC1Q16533 368 aa11.64□□□□□ -0.55
TNFAIP3-209ENST00000619035 ARMCX4Q5H9R4 360 aa11.64□□□□□ -0.55
TNFAIP3-209ENST00000619035 PLAG1Q6DJT9 500 aa11.64□□□□□ -0.55
TNFAIP3-209ENST00000619035 SLC30A6Q6NXT4 461 aa11.64□□□□□ -0.55
TNFAIP3-209ENST00000619035 ULK3Q6PHR2 472 aa11.64□□□□□ -0.55
TNFAIP3-209ENST00000619035 MARCH3Q86UD3 253 aa11.64□□□□□ -0.55
TNFAIP3-209ENST00000619035 LSMEM1Q8N8F7 131 aa11.64□□□□□ -0.55
TNFAIP3-209ENST00000619035 ZNF441Q8N8Z8 693 aa11.64□□□□□ -0.55
TNFAIP3-209ENST00000619035 BPIFA2Q96DR5 249 aa11.64□□□□□ -0.55
TNFAIP3-209ENST00000619035 LRR1Q96L50 414 aa11.64□□□□□ -0.55
TNFAIP3-209ENST00000619035 WDR77Q9BQA1 342 aaPredicted RBP11.64□□□□□ -0.55
TNFAIP3-209ENST00000619035 TBL1XR1Q9BZK7 514 aa11.64□□□□□ -0.55
TNFAIP3-209ENST00000619035 RTN4RQ9BZR6 473 aa11.64□□□□□ -0.55
TNFAIP3-209ENST00000619035 OR51E2Q9H255 320 aa11.64□□□□□ -0.55
TNFAIP3-209ENST00000619035 PTRH2Q9Y3E5 179 aaKnown RBP11.64□□□□□ -0.55
TNFAIP3-209ENST00000619035 EFCAB10A6NFE3 127 aa11.63□□□□□ -0.55
TNFAIP3-209ENST00000619035 UNC119BA6NIH7 251 aa11.63□□□□□ -0.55
TNFAIP3-209ENST00000619035 C4orf47A7E2U8 309 aa11.63□□□□□ -0.55
TNFAIP3-209ENST00000619035 C17orf51A8MQB3 221 aa11.63□□□□□ -0.55
TNFAIP3-209ENST00000619035 EFCAB9A8MZ26 197 aa11.63□□□□□ -0.55
TNFAIP3-209ENST00000619035 WWP2O00308 870 aa11.63□□□□□ -0.55
TNFAIP3-209ENST00000619035 ZNF264O43296 627 aa11.63□□□□□ -0.55
TNFAIP3-209ENST00000619035 KLF4O43474 513 aa11.63□□□□□ -0.55
TNFAIP3-209ENST00000619035 AIREO43918 545 aa11.63□□□□□ -0.55
TNFAIP3-209ENST00000619035 TSPAN2O60636 221 aa11.63□□□□□ -0.55
TNFAIP3-209ENST00000619035 RFPL3O75679 317 aa11.63□□□□□ -0.55
TNFAIP3-209ENST00000619035 DBTP11182 482 aaKnown RBP11.63□□□□□ -0.55
TNFAIP3-209ENST00000619035 ADH7P40394 386 aa11.63□□□□□ -0.55
TNFAIP3-209ENST00000619035 CDK5Q00535 292 aa11.63□□□□□ -0.55
TNFAIP3-209ENST00000619035 INSM1Q01101 510 aaPredicted RBP11.63□□□□□ -0.55
TNFAIP3-209ENST00000619035 SKP2Q13309 424 aa11.63□□□□□ -0.55
TNFAIP3-209ENST00000619035 DCAF12Q5T6F0 453 aa11.63□□□□□ -0.55
TNFAIP3-209ENST00000619035 FNDC7Q5VTL7 733 aa11.63□□□□□ -0.55
TNFAIP3-209ENST00000619035 FAM198BQ6UWH4 519 aa11.63□□□□□ -0.55
TNFAIP3-209ENST00000619035 ZNF620Q6ZNG0 422 aa11.63□□□□□ -0.55
TNFAIP3-209ENST00000619035 BTLAQ7Z6A9 289 aa11.63□□□□□ -0.55
TNFAIP3-209ENST00000619035 RNF113BQ8IZP6 322 aaKnown RBP11.63□□□□□ -0.55
TNFAIP3-209ENST00000619035 OR8J1Q8NGP2 316 aa11.63□□□□□ -0.55
TNFAIP3-209ENST00000619035 VMP1Q96GC9 406 aa11.63□□□□□ -0.55
TNFAIP3-209ENST00000619035 SEMA4CQ9C0C4 833 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms