RNA–Protein interactions for RNA: ENST00000618207.4

CIITA-212, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 5 BASIC

Gene CIITA, Length 2,844 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-212ENST00000618207 TMEM151BQ8IW70 566 aa11.44□□□□□ -0.58
CIITA-212ENST00000618207 LAX1Q8IWV1 398 aa11.44□□□□□ -0.58
CIITA-212ENST00000618207 OR10H4Q8NGA5 316 aa11.44□□□□□ -0.58
CIITA-212ENST00000618207 RFKQ969G6 155 aa11.44□□□□□ -0.58
CIITA-212ENST00000618207 MSANTD3Q96H12 275 aa11.44□□□□□ -0.58
CIITA-212ENST00000618207 DNAJB12Q9NXW2 375 aaKnown RBP11.44□□□□□ -0.58
CIITA-212ENST00000618207 RPS6KB2Q9UBS0 482 aa11.44□□□□□ -0.58
CIITA-212ENST00000618207 B3GNT3Q9Y2A9 372 aa11.44□□□□□ -0.58
CIITA-212ENST00000618207 MRPS17Q9Y2R5 130 aaKnown RBP11.44□□□□□ -0.58
CIITA-212ENST00000618207 C2orf92A0A1B0GVN3 265 aa11.43□□□□□ -0.58
CIITA-212ENST00000618207 TLCD2A6NGC4 264 aa11.43□□□□□ -0.58
CIITA-212ENST00000618207 C12orf71A8MTZ7 269 aa11.43□□□□□ -0.58
CIITA-212ENST00000618207 LMO7DNF2Z398 122 aa11.43□□□□□ -0.58
CIITA-212ENST00000618207 CBFA2T3O75081 653 aa11.43□□□□□ -0.58
CIITA-212ENST00000618207 UBL4AP11441 157 aa11.43□□□□□ -0.58
CIITA-212ENST00000618207 ACAA2P42765 397 aaKnown RBP11.43□□□□□ -0.58
CIITA-212ENST00000618207 GPR3P46089 330 aa11.43□□□□□ -0.58
CIITA-212ENST00000618207 BCAP31P51572 246 aa11.43□□□□□ -0.58
CIITA-212ENST00000618207 SKP1P63208 163 aa11.43□□□□□ -0.58
CIITA-212ENST00000618207 OXA1LQ15070 435 aa11.43□□□□□ -0.58
CIITA-212ENST00000618207 C14orf28Q4W4Y0 310 aa11.43□□□□□ -0.58
CIITA-212ENST00000618207 ZNF595Q8IYB9 648 aa11.43□□□□□ -0.58
CIITA-212ENST00000618207 BCORP1Q8N888 145 aa11.43□□□□□ -0.58
CIITA-212ENST00000618207 SENP5Q96HI0 755 aaPredicted RBP11.43□□□□□ -0.58
CIITA-212ENST00000618207 SYNDIG1Q9H7V2 258 aa11.43□□□□□ -0.58
CIITA-212ENST00000618207 SIGLEC7Q9Y286 467 aa11.43□□□□□ -0.58
CIITA-212ENST00000618207 FER1L5A0AVI2 2057 aa11.43□□□□□ -0.58
CIITA-212ENST00000618207 CD8B2A6NJW9 211 aa11.43□□□□□ -0.58
CIITA-212ENST00000618207 MAGEB4O15481 346 aaPredicted RBP11.43□□□□□ -0.58
CIITA-212ENST00000618207 PRAMEF2O60811 474 aa11.43□□□□□ -0.58
CIITA-212ENST00000618207 PIAS2O75928 621 aa11.43□□□□□ -0.58
CIITA-212ENST00000618207 SNX4O95219 450 aa11.43□□□□□ -0.58
CIITA-212ENST00000618207 LYPD3O95274 346 aa11.43□□□□□ -0.58
CIITA-212ENST00000618207 DLGAP3O95886 979 aa11.43□□□□□ -0.58
CIITA-212ENST00000618207 AK1P00568 194 aa11.43□□□□□ -0.58
CIITA-212ENST00000618207 CD8BP10966 210 aa11.43□□□□□ -0.58
CIITA-212ENST00000618207 HPGDP15428 266 aa11.43□□□□□ -0.58
CIITA-212ENST00000618207 TBXA2RP21731 343 aa11.43□□□□□ -0.58
CIITA-212ENST00000618207 DRD5P21918 477 aa11.43□□□□□ -0.58
CIITA-212ENST00000618207 HCCSP53701 268 aa11.43□□□□□ -0.58
CIITA-212ENST00000618207 NXPH1P58417 271 aa11.43□□□□□ -0.58
CIITA-212ENST00000618207 FOXK2Q01167 660 aa11.43□□□□□ -0.58
CIITA-212ENST00000618207 FABP5Q01469 135 aa11.43□□□□□ -0.58
CIITA-212ENST00000618207 C3orf38Q5JPI3 329 aa11.43□□□□□ -0.58
CIITA-212ENST00000618207 EXOSC6Q5RKV6 272 aaKnown RBP11.43□□□□□ -0.58
CIITA-212ENST00000618207 OR8H2Q8N162 312 aa11.43□□□□□ -0.58
CIITA-212ENST00000618207 TMEM99Q8N816 258 aa11.43□□□□□ -0.58
CIITA-212ENST00000618207 OR6C4Q8NGE1 309 aa11.43□□□□□ -0.58
CIITA-212ENST00000618207 PRDM6Q9NQX0 595 aa11.43□□□□□ -0.58
CIITA-212ENST00000618207 CUTCQ9NTM9 273 aa11.43□□□□□ -0.58
CIITA-212ENST00000618207 A0A0B4J2E0 115 aa11.42□□□□□ -0.58
CIITA-212ENST00000618207 A0A1B0GX12 115 aa11.42□□□□□ -0.58
CIITA-212ENST00000618207 LOC110117498-PIK3R3F6TDL0 507 aa11.42□□□□□ -0.58
CIITA-212ENST00000618207 IMPA2O14732 288 aa11.42□□□□□ -0.58
CIITA-212ENST00000618207 NCR1O76036 304 aa11.42□□□□□ -0.58
CIITA-212ENST00000618207 HMGN1P05114 100 aa11.42□□□□□ -0.58
CIITA-212ENST00000618207 TNFSF8P32971 234 aa11.42□□□□□ -0.58
CIITA-212ENST00000618207 GABRA4P48169 554 aa11.42□□□□□ -0.58
CIITA-212ENST00000618207 CFHR1Q03591 330 aa11.42□□□□□ -0.58
CIITA-212ENST00000618207 CRMP1Q14194 572 aa11.42□□□□□ -0.58
CIITA-212ENST00000618207 SLC25A30Q5SVS4 291 aa11.42□□□□□ -0.58
CIITA-212ENST00000618207 PLEKHG7Q6ZR37 379 aa11.42□□□□□ -0.58
CIITA-212ENST00000618207 MRGPREQ86SM8 312 aa11.42□□□□□ -0.58
CIITA-212ENST00000618207 LYSMD2Q8IV50 215 aa11.42□□□□□ -0.58
CIITA-212ENST00000618207 SLC37A3Q8NCC5 494 aa11.42□□□□□ -0.58
CIITA-212ENST00000618207 UFD1Q92890 307 aa11.42□□□□□ -0.58
CIITA-212ENST00000618207 MROQ9BYG7 248 aa11.42□□□□□ -0.58
CIITA-212ENST00000618207 FN3KQ9H479 309 aa11.42□□□□□ -0.58
CIITA-212ENST00000618207 SMURF1Q9HCE7 757 aa11.42□□□□□ -0.58
CIITA-212ENST00000618207 CCDC59Q9P031 241 aaKnown RBP11.42□□□□□ -0.58
CIITA-212ENST00000618207 LILRA5A6NI73 299 aa11.42□□□□□ -0.58
CIITA-212ENST00000618207 ZNF670-ZNF695F2Z2N8 137 aa11.42□□□□□ -0.58
CIITA-212ENST00000618207 BHLHE40O14503 412 aa11.42□□□□□ -0.58
CIITA-212ENST00000618207 UPK1BO75841 260 aa11.42□□□□□ -0.58
CIITA-212ENST00000618207 FOLR1P15328 257 aa11.42□□□□□ -0.58
CIITA-212ENST00000618207 RUNX1T1Q06455 604 aa11.42□□□□□ -0.58
CIITA-212ENST00000618207 NXNL2Q5VZ03 156 aa11.42□□□□□ -0.58
CIITA-212ENST00000618207 CBLN3Q6UW01 205 aa11.42□□□□□ -0.58
CIITA-212ENST00000618207 MED25Q71SY5 747 aa11.42□□□□□ -0.58
CIITA-212ENST00000618207 SLC35F3Q8IY50 421 aa11.42□□□□□ -0.58
CIITA-212ENST00000618207 SPERTQ8NA61 448 aa11.42□□□□□ -0.58
CIITA-212ENST00000618207 SDR9C7Q8NEX9 313 aa11.42□□□□□ -0.58
CIITA-212ENST00000618207 OR4K13Q8NH42 304 aa11.42□□□□□ -0.58
CIITA-212ENST00000618207 OR4C6Q8NH72 309 aa11.42□□□□□ -0.58
CIITA-212ENST00000618207 PHOSPHO1Q8TCT1 267 aa11.42□□□□□ -0.58
CIITA-212ENST00000618207 PTP4A1Q93096 173 aa11.42□□□□□ -0.58
CIITA-212ENST00000618207 ZDHHC12Q96GR4 267 aa11.42□□□□□ -0.58
CIITA-212ENST00000618207 KLHDC3Q9BQ90 382 aa11.42□□□□□ -0.58
CIITA-212ENST00000618207 ZNF559Q9BR84 538 aa11.42□□□□□ -0.58
CIITA-212ENST00000618207 FGF20Q9NP95 211 aaPredicted RBP11.42□□□□□ -0.58
CIITA-212ENST00000618207 PRDM9Q9NQV7 894 aa11.42□□□□□ -0.58
CIITA-212ENST00000618207 ADAM18Q9Y3Q7 739 aa11.42□□□□□ -0.58
CIITA-212ENST00000618207 NOX1Q9Y5S8 564 aa11.42□□□□□ -0.58
CIITA-212ENST00000618207 PEX16Q9Y5Y5 336 aa11.42□□□□□ -0.58
CIITA-212ENST00000618207 TP53BP1Q12888 1972 aaPredicted RBP11.42□□□□□ -0.58
CIITA-212ENST00000618207 PRR23D1E9PI22 279 aaPredicted RBP11.41□□□□□ -0.58
CIITA-212ENST00000618207 PRR23D2P0DMB1 279 aaPredicted RBP11.41□□□□□ -0.58
CIITA-212ENST00000618207 CPEP16870 476 aa11.41□□□□□ -0.58
CIITA-212ENST00000618207 NUDT1P36639 197 aa11.41□□□□□ -0.58
CIITA-212ENST00000618207 TMED10P49755 219 aaKnown RBP11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms