RNA–Protein interactions for RNA: ENST00000617647.4

PDE6A-205, Transcript of phosphodiesterase 6A, humanhuman

TSL 1 (best) BASIC

Gene PDE6A, Length 4,039 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6A-205ENST00000617647 SV2CQ496J9 727 aa6.92□□□□□ -1.3
PDE6A-205ENST00000617647 RNASE10Q5GAN6 216 aaKnown RBP6.92□□□□□ -1.3
PDE6A-205ENST00000617647 CEACAM20Q6UY09 585 aa6.92□□□□□ -1.3
PDE6A-205ENST00000617647 MON1AQ86VX9 555 aa6.92□□□□□ -1.3
PDE6A-205ENST00000617647 MRPL41Q8IXM3 137 aaKnown RBP6.92□□□□□ -1.3
PDE6A-205ENST00000617647 ETFBKMTQ8IXQ9 262 aa6.92□□□□□ -1.3
PDE6A-205ENST00000617647 FAM26EQ8N5C1 309 aa6.92□□□□□ -1.3
PDE6A-205ENST00000617647 PLA2G15Q8NCC3 412 aa6.92□□□□□ -1.3
PDE6A-205ENST00000617647 CCDC54Q8NEL0 328 aa6.92□□□□□ -1.3
PDE6A-205ENST00000617647 OR52E4Q8NGH9 312 aa6.92□□□□□ -1.3
PDE6A-205ENST00000617647 CAMK1GQ96NX5 476 aa6.92□□□□□ -1.3
PDE6A-205ENST00000617647 SEC11CQ9BY50 192 aa6.92□□□□□ -1.3
PDE6A-205ENST00000617647 PCDHGC4Q9Y5F7 938 aa6.92□□□□□ -1.3
PDE6A-205ENST00000617647 PCDHGA5Q9Y5G8 931 aa6.92□□□□□ -1.3
PDE6A-205ENST00000617647 PCDHGA1Q9Y5H4 931 aa6.92□□□□□ -1.3
PDE6A-205ENST00000617647 MARCH11A6NNE9 402 aa6.92□□□□□ -1.3
PDE6A-205ENST00000617647 RNASEK-C17orf49H0YIS7 233 aa6.92□□□□□ -1.3
PDE6A-205ENST00000617647 DCTN6O00399 190 aa6.92□□□□□ -1.3
PDE6A-205ENST00000617647 PRODHO43272 600 aa6.92□□□□□ -1.3
PDE6A-205ENST00000617647 FBXO24O75426 580 aa6.92□□□□□ -1.3
PDE6A-205ENST00000617647 SCGNO76038 276 aa6.92□□□□□ -1.3
PDE6A-205ENST00000617647 GJB1P08034 283 aa6.92□□□□□ -1.3
PDE6A-205ENST00000617647 NR2F1P10589 423 aa6.92□□□□□ -1.3
PDE6A-205ENST00000617647 MTNR1BP49286 362 aa6.92□□□□□ -1.3
PDE6A-205ENST00000617647 PCBP4P57723 403 aaKnown RBP6.92□□□□□ -1.3
PDE6A-205ENST00000617647 VAMP2P63027 116 aa6.92□□□□□ -1.3
PDE6A-205ENST00000617647 BEX3Q00994 111 aa6.92□□□□□ -1.3
PDE6A-205ENST00000617647 PLEKHN1Q494U1 663 aaPredicted RBP6.92□□□□□ -1.3
PDE6A-205ENST00000617647 ZDHHC20Q5W0Z9 365 aa6.92□□□□□ -1.3
PDE6A-205ENST00000617647 OR2T2Q6IF00 324 aa6.92□□□□□ -1.3
PDE6A-205ENST00000617647 ABHD15Q6UXT9 468 aa6.92□□□□□ -1.3
PDE6A-205ENST00000617647 THNSL2Q86YJ6 484 aa6.92□□□□□ -1.3
PDE6A-205ENST00000617647 BPIFB2Q8N4F0 458 aa6.92□□□□□ -1.3
PDE6A-205ENST00000617647 EIF4E3Q8N5X7 224 aaKnown RBP6.92□□□□□ -1.3
PDE6A-205ENST00000617647 C10orf53Q8N6V4 93 aa6.92□□□□□ -1.3
PDE6A-205ENST00000617647 OR52L1Q8NGH7 329 aa6.92□□□□□ -1.3
PDE6A-205ENST00000617647 OR56B1Q8NGI3 324 aa6.92□□□□□ -1.3
PDE6A-205ENST00000617647 NEK7Q8TDX7 302 aa6.92□□□□□ -1.3
PDE6A-205ENST00000617647 BRI3BPQ8WY22 251 aa6.92□□□□□ -1.3
PDE6A-205ENST00000617647 F2RL3Q96RI0 385 aa6.92□□□□□ -1.3
PDE6A-205ENST00000617647 ZNF607Q96SK3 696 aa6.92□□□□□ -1.3
PDE6A-205ENST00000617647 MTERF1Q99551 399 aaKnown RBP6.92□□□□□ -1.3
PDE6A-205ENST00000617647 ELF4Q99607 663 aaPredicted RBP6.92□□□□□ -1.3
PDE6A-205ENST00000617647 BHLHE41Q9C0J9 482 aaPredicted RBP6.92□□□□□ -1.3
PDE6A-205ENST00000617647 SPACA1Q9HBV2 294 aa6.92□□□□□ -1.3
PDE6A-205ENST00000617647 SIX4Q9UIU6 781 aa6.92□□□□□ -1.3
PDE6A-205ENST00000617647 CAMK2AQ9UQM7 478 aa6.92□□□□□ -1.3
PDE6A-205ENST00000617647 ZAR1LA6NP61 321 aa6.91□□□□□ -1.3
PDE6A-205ENST00000617647 SEC14L6B5MCN3 397 aa6.91□□□□□ -1.3
PDE6A-205ENST00000617647 LDLRAD4O15165 306 aa6.91□□□□□ -1.3
PDE6A-205ENST00000617647 RNF13O43567 381 aa6.91□□□□□ -1.3
PDE6A-205ENST00000617647 SCAF4O95104 1147 aaKnown RBP6.91□□□□□ -1.3
PDE6A-205ENST00000617647 MT-ND5P03915 603 aa6.91□□□□□ -1.3
PDE6A-205ENST00000617647 IL3P08700 152 aa6.91□□□□□ -1.3
PDE6A-205ENST00000617647 ACP2P11117 423 aa6.91□□□□□ -1.3
PDE6A-205ENST00000617647 EPXP11678 715 aa6.91□□□□□ -1.3
PDE6A-205ENST00000617647 ZNF7P17097 686 aaPredicted RBP6.91□□□□□ -1.3
PDE6A-205ENST00000617647 PYCR1P32322 319 aa6.91□□□□□ -1.3
PDE6A-205ENST00000617647 STC1P52823 247 aa6.91□□□□□ -1.3
PDE6A-205ENST00000617647 ZP1P60852 638 aa6.91□□□□□ -1.3
PDE6A-205ENST00000617647 LPCAT3Q6P1A2 487 aa6.91□□□□□ -1.3
PDE6A-205ENST00000617647 GDPD4Q6W3E5 623 aa6.91□□□□□ -1.3
PDE6A-205ENST00000617647 TPGS1Q6ZTW0 290 aa6.91□□□□□ -1.3
PDE6A-205ENST00000617647 MSRB3Q8IXL7 192 aa6.91□□□□□ -1.3
PDE6A-205ENST00000617647 MAML2Q8IZL2 1156 aaPredicted RBP6.91□□□□□ -1.3
PDE6A-205ENST00000617647 FAM98AQ8NCA5 519 aaKnown RBP6.91□□□□□ -1.3
PDE6A-205ENST00000617647 OR56A3Q8NH54 315 aa6.91□□□□□ -1.3
PDE6A-205ENST00000617647 OR52I2Q8NH67 350 aa6.91□□□□□ -1.3
PDE6A-205ENST00000617647 C5orf34Q96MH7 638 aa6.91□□□□□ -1.3
PDE6A-205ENST00000617647 ZNF582Q96NG8 517 aaPredicted RBP6.91□□□□□ -1.3
PDE6A-205ENST00000617647 ASB16Q96NS5 453 aa6.91□□□□□ -1.3
PDE6A-205ENST00000617647 NAA11Q9BSU3 229 aaPredicted RBP6.91□□□□□ -1.3
PDE6A-205ENST00000617647 SOX7Q9BT81 388 aa6.91□□□□□ -1.3
PDE6A-205ENST00000617647 SLC6A16Q9GZN6 736 aa6.91□□□□□ -1.3
PDE6A-205ENST00000617647 TREX1Q9NSU2 369 aa6.91□□□□□ -1.3
PDE6A-205ENST00000617647 FAM120CQ9NX05 1096 aaKnown RBP6.91□□□□□ -1.3
PDE6A-205ENST00000617647 TAS2R5Q9NYW4 299 aa6.91□□□□□ -1.3
PDE6A-205ENST00000617647 ZNF230Q9UIE0 474 aaPredicted RBP6.91□□□□□ -1.3
PDE6A-205ENST00000617647 RPH3ALQ9UNE2 315 aa6.91□□□□□ -1.3
PDE6A-205ENST00000617647 B4E171 279 aa6.91□□□□□ -1.3
PDE6A-205ENST00000617647 FAAHO00519 579 aa6.91□□□□□ -1.3
PDE6A-205ENST00000617647 CCSO14618 274 aa6.91□□□□□ -1.3
PDE6A-205ENST00000617647 BCL2L11O43521 198 aa6.91□□□□□ -1.3
PDE6A-205ENST00000617647 C6orf47O95873 294 aa6.91□□□□□ -1.3
PDE6A-205ENST00000617647 SERPINA5P05154 406 aa6.91□□□□□ -1.3
PDE6A-205ENST00000617647 SNRPCP09234 159 aaKnown RBP6.91□□□□□ -1.3
PDE6A-205ENST00000617647 ADRB3P13945 408 aa6.91□□□□□ -1.3
PDE6A-205ENST00000617647 BMP7P18075 431 aa6.91□□□□□ -1.3
PDE6A-205ENST00000617647 PSMA3P25788 255 aa6.91□□□□□ -1.3
PDE6A-205ENST00000617647 DHPSP49366 369 aaPredicted RBP6.91□□□□□ -1.3
PDE6A-205ENST00000617647 TNFRSF9Q07011 255 aa6.91□□□□□ -1.3
PDE6A-205ENST00000617647 IL10RBQ08334 325 aa6.91□□□□□ -1.3
PDE6A-205ENST00000617647 SIRPB2Q5JXA9 342 aa6.91□□□□□ -1.3
PDE6A-205ENST00000617647 SLC43A2Q8N370 569 aa6.91□□□□□ -1.3
PDE6A-205ENST00000617647 SPICQ8N5J4 248 aa6.91□□□□□ -1.3
PDE6A-205ENST00000617647 FAM71CQ8NEG0 241 aa6.91□□□□□ -1.3
PDE6A-205ENST00000617647 MDGA1Q8NFP4 955 aa6.91□□□□□ -1.3
PDE6A-205ENST00000617647 OR4K1Q8NGD4 311 aa6.91□□□□□ -1.3
PDE6A-205ENST00000617647 OR2L2Q8NH16 312 aa6.91□□□□□ -1.3
PDE6A-205ENST00000617647 EXTL1Q92935 676 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms