RNA–Protein interactions for RNA: ENST00000616247.4

LMO3-235, Transcript of LIM domain only 3, humanhuman

TSL 5 BASIC

Gene LMO3, Length 3,227 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-235ENST00000616247 NPIPA8P0DM63 369 aa6.2□□□□□ -1.42
LMO3-235ENST00000616247 MAOBP27338 520 aa6.2□□□□□ -1.42
LMO3-235ENST00000616247 CCND3P30281 292 aaPredicted RBP6.2□□□□□ -1.42
LMO3-235ENST00000616247 DLX5P56178 289 aa6.2□□□□□ -1.42
LMO3-235ENST00000616247 CDKN3Q16667 212 aa6.2□□□□□ -1.42
LMO3-235ENST00000616247 RNLSQ5VYX0 342 aa6.2□□□□□ -1.42
LMO3-235ENST00000616247 VASNQ6EMK4 673 aa6.2□□□□□ -1.42
LMO3-235ENST00000616247 TFAP2EQ6VUC0 442 aa6.2□□□□□ -1.42
LMO3-235ENST00000616247 GDPD4Q6W3E5 623 aa6.2□□□□□ -1.42
LMO3-235ENST00000616247 MEPCEQ7L2J0 689 aaKnown RBP6.2□□□□□ -1.42
LMO3-235ENST00000616247 SLC16A13Q7RTY0 426 aa6.2□□□□□ -1.42
LMO3-235ENST00000616247 LRRC56Q8IYG6 542 aaPredicted RBP6.2□□□□□ -1.42
LMO3-235ENST00000616247 CPXM2Q8N436 756 aa6.2□□□□□ -1.42
LMO3-235ENST00000616247 POGLUT1Q8NBL1 392 aa6.2□□□□□ -1.42
LMO3-235ENST00000616247 OR5AR1Q8NGP9 310 aa6.2□□□□□ -1.42
LMO3-235ENST00000616247 DVL3Q92997 716 aaPredicted RBP6.2□□□□□ -1.42
LMO3-235ENST00000616247 ELP4Q96EB1 424 aa6.2□□□□□ -1.42
LMO3-235ENST00000616247 S100A16Q96FQ6 103 aaKnown RBP6.2□□□□□ -1.42
LMO3-235ENST00000616247 SLC41A3Q96GZ6 507 aa6.2□□□□□ -1.42
LMO3-235ENST00000616247 CAMK1GQ96NX5 476 aa6.2□□□□□ -1.42
LMO3-235ENST00000616247 CD180Q99467 661 aa6.2□□□□□ -1.42
LMO3-235ENST00000616247 NKX3-1Q99801 234 aaPredicted RBP6.2□□□□□ -1.42
LMO3-235ENST00000616247 MICU1Q9BPX6 476 aa6.2□□□□□ -1.42
LMO3-235ENST00000616247 AIF1LQ9BQI0 150 aa6.2□□□□□ -1.42
LMO3-235ENST00000616247 CRB3Q9BUF7 120 aa6.2□□□□□ -1.42
LMO3-235ENST00000616247 ENKD1Q9H0I2 346 aa6.2□□□□□ -1.42
LMO3-235ENST00000616247 GLIPR2Q9H4G4 154 aa6.2□□□□□ -1.42
LMO3-235ENST00000616247 TMEM231Q9H6L2 316 aa6.2□□□□□ -1.42
LMO3-235ENST00000616247 EXO5Q9H790 373 aa6.2□□□□□ -1.42
LMO3-235ENST00000616247 NDOR1Q9UHB4 597 aa6.2□□□□□ -1.42
LMO3-235ENST00000616247 CAMK2AQ9UQM7 478 aa6.2□□□□□ -1.42
LMO3-235ENST00000616247 ANKRD36A6QL64 1941 aa6.2□□□□□ -1.42
LMO3-235ENST00000616247 A0A1W2PS29 197 aa6.2□□□□□ -1.42
LMO3-235ENST00000616247 ZNF705EA8MWA4 302 aaPredicted RBP6.2□□□□□ -1.42
LMO3-235ENST00000616247 F8W036 122 aa6.2□□□□□ -1.42
LMO3-235ENST00000616247 PYCARD-AS1I3L0S3 204 aa6.2□□□□□ -1.42
LMO3-235ENST00000616247 CDC42EP2O14613 210 aa6.2□□□□□ -1.42
LMO3-235ENST00000616247 POP7O75817 140 aaKnown RBP6.2□□□□□ -1.42
LMO3-235ENST00000616247 RASGRP1O95267 797 aa6.2□□□□□ -1.42
LMO3-235ENST00000616247 VNN2O95498 520 aa6.2□□□□□ -1.42
LMO3-235ENST00000616247 ATP1B1P05026 303 aa6.2□□□□□ -1.42
LMO3-235ENST00000616247 ZDHHC11BP0C7U3 371 aa6.2□□□□□ -1.42
LMO3-235ENST00000616247 EPXP11678 715 aa6.2□□□□□ -1.42
LMO3-235ENST00000616247 GABRA1P14867 456 aa6.2□□□□□ -1.42
LMO3-235ENST00000616247 TEAD1P28347 426 aa6.2□□□□□ -1.42
LMO3-235ENST00000616247 HOXD10P28358 340 aa6.2□□□□□ -1.42
LMO3-235ENST00000616247 GABRR2P28476 465 aa6.2□□□□□ -1.42
LMO3-235ENST00000616247 THBS2P35442 1172 aa6.2□□□□□ -1.42
LMO3-235ENST00000616247 KCNJ3P48549 501 aa6.2□□□□□ -1.42
LMO3-235ENST00000616247 MMP15P51511 669 aa6.2□□□□□ -1.42
LMO3-235ENST00000616247 LUMP51884 338 aaPredicted RBP6.2□□□□□ -1.42
LMO3-235ENST00000616247 PNLIPRP1P54315 467 aa6.2□□□□□ -1.42
LMO3-235ENST00000616247 BLOC1S1P78537 153 aa6.2□□□□□ -1.42
LMO3-235ENST00000616247 PDE7AQ13946 482 aa6.2□□□□□ -1.42
LMO3-235ENST00000616247 CRMP1Q14194 572 aa6.2□□□□□ -1.42
LMO3-235ENST00000616247 TMEM44Q2T9K0 475 aa6.2□□□□□ -1.42
LMO3-235ENST00000616247 PCGF3Q3KNV8 242 aa6.2□□□□□ -1.42
LMO3-235ENST00000616247 CCDC157Q569K6 752 aa6.2□□□□□ -1.42
LMO3-235ENST00000616247 KHDRBS2Q5VWX1 349 aaKnown RBP6.2□□□□□ -1.42
LMO3-235ENST00000616247 ZNF546Q86UE3 836 aa6.2□□□□□ -1.42
LMO3-235ENST00000616247 NUDT13Q86X67 352 aa6.2□□□□□ -1.42
LMO3-235ENST00000616247 SUN3Q8TAQ9 357 aa6.2□□□□□ -1.42
LMO3-235ENST00000616247 THAP6Q8TBB0 222 aa6.2□□□□□ -1.42
LMO3-235ENST00000616247 BRIX1Q8TDN6 353 aaKnown RBP6.2□□□□□ -1.42
LMO3-235ENST00000616247 LINC01599Q8WXQ3 324 aa6.2□□□□□ -1.42
LMO3-235ENST00000616247 GLYATL1Q969I3 302 aa6.2□□□□□ -1.42
LMO3-235ENST00000616247 CMSS1Q9BQ75 279 aaKnown RBP6.2□□□□□ -1.42
LMO3-235ENST00000616247 KLF16Q9BXK1 252 aaPredicted RBP6.2□□□□□ -1.42
LMO3-235ENST00000616247 SLC22A11Q9NSA0 550 aa6.2□□□□□ -1.42
LMO3-235ENST00000616247 COMMD9Q9P000 198 aa6.2□□□□□ -1.42
LMO3-235ENST00000616247 KANTRA0A1W2PQU2 76 aa6.2□□□□□ -1.42
LMO3-235ENST00000616247 PLSCR5A0PG75 271 aa6.2□□□□□ -1.42
LMO3-235ENST00000616247 NPIPB8E9PQR5 432 aa6.2□□□□□ -1.42
LMO3-235ENST00000616247 F5H0A9 414 aaPredicted RBP6.2□□□□□ -1.42
LMO3-235ENST00000616247 DNASE2O00115 360 aaPredicted RBP6.2□□□□□ -1.42
LMO3-235ENST00000616247 PRAMEF2O60811 474 aa6.2□□□□□ -1.42
LMO3-235ENST00000616247 PRAF2O60831 178 aa6.2□□□□□ -1.42
LMO3-235ENST00000616247 PTP4A3O75365 173 aa6.2□□□□□ -1.42
LMO3-235ENST00000616247 LEFTY1O75610 366 aa6.2□□□□□ -1.42
LMO3-235ENST00000616247 FARS2O95363 451 aaKnown RBP6.2□□□□□ -1.42
LMO3-235ENST00000616247 PPP1R3DO95685 299 aa6.2□□□□□ -1.42
LMO3-235ENST00000616247 WDPCPO95876 746 aa6.2□□□□□ -1.42
LMO3-235ENST00000616247 GIPP09681 153 aaPredicted RBP6.2□□□□□ -1.42
LMO3-235ENST00000616247 IFNGR1P15260 489 aa6.2□□□□□ -1.42
LMO3-235ENST00000616247 RPL4P36578 427 aaKnown RBP6.2□□□□□ -1.42
LMO3-235ENST00000616247 GPR1P46091 355 aa6.2□□□□□ -1.42
LMO3-235ENST00000616247 ART1P52961 327 aa6.2□□□□□ -1.42
LMO3-235ENST00000616247 UBE2IP63279 158 aaKnown RBP6.2□□□□□ -1.42
LMO3-235ENST00000616247 AGERQ15109 404 aa6.2□□□□□ -1.42
LMO3-235ENST00000616247 C9orf131Q5VYM1 1079 aa6.2□□□□□ -1.42
LMO3-235ENST00000616247 LIN54Q6MZP7 749 aa6.2□□□□□ -1.42
LMO3-235ENST00000616247 TMEM17Q86X19 198 aa6.2□□□□□ -1.42
LMO3-235ENST00000616247 GID4Q8IVV7 300 aa6.2□□□□□ -1.42
LMO3-235ENST00000616247 SPAG16Q8N0X2 631 aa6.2□□□□□ -1.42
LMO3-235ENST00000616247 IL17RCQ8NAC3 791 aa6.2□□□□□ -1.42
LMO3-235ENST00000616247 DNAAF1Q8NEP3 725 aa6.2□□□□□ -1.42
LMO3-235ENST00000616247 OR13C2Q8NGS9 318 aa6.2□□□□□ -1.42
LMO3-235ENST00000616247 OR4K13Q8NH42 304 aa6.2□□□□□ -1.42
LMO3-235ENST00000616247 SYNPRQ8TBG9 265 aa6.2□□□□□ -1.42
LMO3-235ENST00000616247 BCL7CQ8WUZ0 217 aaPredicted RBP6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms