RNA–Protein interactions for RNA: ENST00000616236.1

RFC3-203, Transcript of replication factor C subunit 3, humanhuman

TSL 3

Gene RFC3, Length 612 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3-203ENST00000616236 BFARQ9NZS9 450 aa4.19□□□□□ -1.74
RFC3-203ENST00000616236 NTNG1Q9Y2I2 539 aa4.19□□□□□ -1.74
RFC3-203ENST00000616236 SNED1Q8TER0 1413 aa4.19□□□□□ -1.74
RFC3-203ENST00000616236 HSFX4A0A1B0GTS1 333 aaPredicted RBP4.18□□□□□ -1.74
RFC3-203ENST00000616236 HSFX3A0A1B0GWH4 333 aaPredicted RBP4.18□□□□□ -1.74
RFC3-203ENST00000616236 SAGE2PA6NJ88 616 aa4.18□□□□□ -1.74
RFC3-203ENST00000616236 BLOC1S5-TXNDC5H3BN57 136 aa4.18□□□□□ -1.74
RFC3-203ENST00000616236 POLR3GO15318 223 aaPredicted RBP4.18□□□□□ -1.74
RFC3-203ENST00000616236 PFKFB2O60825 505 aa4.18□□□□□ -1.74
RFC3-203ENST00000616236 OR2J3O76001 311 aa4.18□□□□□ -1.74
RFC3-203ENST00000616236 MMP1P03956 469 aa4.18□□□□□ -1.74
RFC3-203ENST00000616236 IVLP07476 585 aa4.18□□□□□ -1.74
RFC3-203ENST00000616236 HSD17B1P14061 328 aa4.18□□□□□ -1.74
RFC3-203ENST00000616236 ANXA13P27216 316 aa4.18□□□□□ -1.74
RFC3-203ENST00000616236 MAP3K8P41279 467 aa4.18□□□□□ -1.74
RFC3-203ENST00000616236 MFAP2P55001 183 aa4.18□□□□□ -1.74
RFC3-203ENST00000616236 RIPK4P57078 832 aa4.18□□□□□ -1.74
RFC3-203ENST00000616236 RAB11AP62491 216 aa4.18□□□□□ -1.74
RFC3-203ENST00000616236 PPIL2Q13356 520 aa4.18□□□□□ -1.74
RFC3-203ENST00000616236 RAB11BQ15907 218 aa4.18□□□□□ -1.74
RFC3-203ENST00000616236 ZNF77Q15935 545 aa4.18□□□□□ -1.74
RFC3-203ENST00000616236 TRIM16LQ309B1 348 aa4.18□□□□□ -1.74
RFC3-203ENST00000616236 HLA-BQ31612 363 aa4.18□□□□□ -1.74
RFC3-203ENST00000616236 MS4A18Q3C1V0 323 aa4.18□□□□□ -1.74
RFC3-203ENST00000616236 GLYR1Q49A26 553 aaPredicted RBP4.18□□□□□ -1.74
RFC3-203ENST00000616236 MS4A13Q5J8X5 152 aa4.18□□□□□ -1.74
RFC3-203ENST00000616236 SLC22A10Q63ZE4 541 aa4.18□□□□□ -1.74
RFC3-203ENST00000616236 REP15Q6BDI9 236 aa4.18□□□□□ -1.74
RFC3-203ENST00000616236 PVRIGQ6DKI7 326 aa4.18□□□□□ -1.74
RFC3-203ENST00000616236 LRRC31Q6UY01 552 aa4.18□□□□□ -1.74
RFC3-203ENST00000616236 HSDL2Q6YN16 418 aa4.18□□□□□ -1.74
RFC3-203ENST00000616236 CCDC65Q8IXS2 484 aa4.18□□□□□ -1.74
RFC3-203ENST00000616236 OR2L13Q8N349 312 aa4.18□□□□□ -1.74
RFC3-203ENST00000616236 OR4F6Q8NGB9 312 aa4.18□□□□□ -1.74
RFC3-203ENST00000616236 C11orf45Q8TAV5 145 aa4.18□□□□□ -1.74
RFC3-203ENST00000616236 MARCH1Q8TCQ1 289 aa4.18□□□□□ -1.74
RFC3-203ENST00000616236 ZDHHC19Q8WVZ1 309 aaPredicted RBP4.18□□□□□ -1.74
RFC3-203ENST00000616236 TRUB1Q8WWH5 349 aaKnown RBP4.18□□□□□ -1.74
RFC3-203ENST00000616236 IL1F10Q8WWZ1 152 aa4.18□□□□□ -1.74
RFC3-203ENST00000616236 ARNTL2Q8WYA1 636 aa4.18□□□□□ -1.74
RFC3-203ENST00000616236 TBRG4Q969Z0 631 aaKnown RBP eCLIP4.18□□□□□ -1.74
RFC3-203ENST00000616236 CXorf40BQ96DE9 158 aa4.18□□□□□ -1.74
RFC3-203ENST00000616236 ATXN7L3BQ96GX2 97 aa4.18□□□□□ -1.74
RFC3-203ENST00000616236 ZNF578Q96N58 590 aaPredicted RBP4.18□□□□□ -1.74
RFC3-203ENST00000616236 HSD17B14Q9BPX1 270 aa4.18□□□□□ -1.74
RFC3-203ENST00000616236 WDR13Q9H1Z4 485 aa4.18□□□□□ -1.74
RFC3-203ENST00000616236 FBXO44Q9H4M3 255 aa4.18□□□□□ -1.74
RFC3-203ENST00000616236 ELOVL6Q9H5J4 265 aa4.18□□□□□ -1.74
RFC3-203ENST00000616236 C8orf33Q9H7E9 229 aaPredicted RBP4.18□□□□□ -1.74
RFC3-203ENST00000616236 LZTFL1Q9NQ48 299 aa4.18□□□□□ -1.74
RFC3-203ENST00000616236 AGPAT3Q9NRZ7 376 aa4.18□□□□□ -1.74
RFC3-203ENST00000616236 NUDT4Q9NZJ9 180 aa4.18□□□□□ -1.74
RFC3-203ENST00000616236 WRAP73Q9P2S5 460 aaPredicted RBP4.18□□□□□ -1.74
RFC3-203ENST00000616236 MGAT4AQ9UM21 535 aa4.18□□□□□ -1.74
RFC3-203ENST00000616236 TRGV8A0A0C4DH27 118 aa4.17□□□□□ -1.74
RFC3-203ENST00000616236 FAM172BPA6NC97 362 aa4.17□□□□□ -1.74
RFC3-203ENST00000616236 PMS2P5A8MQ11 134 aa4.17□□□□□ -1.74
RFC3-203ENST00000616236 TGM6O95932 706 aa4.17□□□□□ -1.74
RFC3-203ENST00000616236 ZNF24P17028 368 aa4.17□□□□□ -1.74
RFC3-203ENST00000616236 CD9P21926 228 aa4.17□□□□□ -1.74
RFC3-203ENST00000616236 U2AF2P26368 475 aaKnown RBP eCLIP4.17□□□□□ -1.742e-6■■■□□ 17
RFC3-203ENST00000616236 CD80P33681 288 aa4.17□□□□□ -1.74
RFC3-203ENST00000616236 LIM2P55344 173 aa4.17□□□□□ -1.74
RFC3-203ENST00000616236 DAOAP59103 153 aa4.17□□□□□ -1.74
RFC3-203ENST00000616236 SNRPD1P62314 119 aaKnown RBP4.17□□□□□ -1.74
RFC3-203ENST00000616236 XIAPP98170 497 aa4.17□□□□□ -1.74
RFC3-203ENST00000616236 CYCSP99999 105 aaKnown RBP4.17□□□□□ -1.74
RFC3-203ENST00000616236 ZNF154Q13106 437 aa4.17□□□□□ -1.74
RFC3-203ENST00000616236 DPYSL3Q14195 570 aa4.17□□□□□ -1.74
RFC3-203ENST00000616236 CYP51A1Q16850 503 aa4.17□□□□□ -1.74
RFC3-203ENST00000616236 ISXQ2M1V0 245 aa4.17□□□□□ -1.74
RFC3-203ENST00000616236 VPS26BQ4G0F5 336 aa4.17□□□□□ -1.74
RFC3-203ENST00000616236 TWF2Q6IBS0 349 aaKnown RBP4.17□□□□□ -1.74
RFC3-203ENST00000616236 PWWP2BQ6NUJ5 590 aa4.17□□□□□ -1.74
RFC3-203ENST00000616236 FAM199XQ6PEV8 388 aaPredicted RBP4.17□□□□□ -1.74
RFC3-203ENST00000616236 SASS6Q6UVJ0 657 aa4.17□□□□□ -1.74
RFC3-203ENST00000616236 NIPA1Q7RTP0 329 aa4.17□□□□□ -1.74
RFC3-203ENST00000616236 VTCN1Q7Z7D3 282 aa4.17□□□□□ -1.74
RFC3-203ENST00000616236 SMIM29Q86T20 159 aa4.17□□□□□ -1.74
RFC3-203ENST00000616236 SLC47A2Q86VL8 602 aa4.17□□□□□ -1.74
RFC3-203ENST00000616236 APLFQ8IW19 511 aaPredicted RBP4.17□□□□□ -1.74
RFC3-203ENST00000616236 RFLNBQ8N5W9 214 aa4.17□□□□□ -1.74
RFC3-203ENST00000616236 CSGALNACT2Q8N6G5 542 aa4.17□□□□□ -1.74
RFC3-203ENST00000616236 NUP37Q8NFH4 326 aa4.17□□□□□ -1.74
RFC3-203ENST00000616236 OR52H1Q8NGJ2 320 aa4.17□□□□□ -1.74
RFC3-203ENST00000616236 OR9A4Q8NGU2 314 aa4.17□□□□□ -1.74
RFC3-203ENST00000616236 LILRB4Q8NHJ6 448 aa4.17□□□□□ -1.74
RFC3-203ENST00000616236 ZNF519Q8TB69 540 aa4.17□□□□□ -1.74
RFC3-203ENST00000616236 KIFAP3Q92845 792 aa4.17□□□□□ -1.74
RFC3-203ENST00000616236 TOMM40LQ969M1 308 aa4.17□□□□□ -1.74
RFC3-203ENST00000616236 GMPPAQ96IJ6 420 aaPredicted RBP4.17□□□□□ -1.74
RFC3-203ENST00000616236 ZNF641Q96N77 438 aaPredicted RBP4.17□□□□□ -1.74
RFC3-203ENST00000616236 CNN2Q99439 309 aaKnown RBP4.17□□□□□ -1.74
RFC3-203ENST00000616236 SLC35A5Q9BS91 424 aa4.17□□□□□ -1.74
RFC3-203ENST00000616236 MRIQ9BWK5 157 aa4.17□□□□□ -1.74
RFC3-203ENST00000616236 RAB34Q9BZG1 259 aa4.17□□□□□ -1.74
RFC3-203ENST00000616236 CHMP4BQ9H444 224 aaKnown RBP4.17□□□□□ -1.74
RFC3-203ENST00000616236 SP140LQ9H930 580 aa4.17□□□□□ -1.74
RFC3-203ENST00000616236 NHEJ1Q9H9Q4 299 aaPredicted RBP4.17□□□□□ -1.74
RFC3-203ENST00000616236 LYRM4Q9HD34 91 aa4.17□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms