RNA–Protein interactions for RNA: ENST00000615901.4

SPTBN1-207, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 5 BASIC

Gene SPTBN1, Length 10,226 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-207ENST00000615901 SLC22A7Q9Y694 548 aa8.54□□□□□ -1.04
SPTBN1-207ENST00000615901 RGS6P49758 472 aa8.54□□□□□ -1.04
SPTBN1-207ENST00000615901 TSPAN31Q12999 210 aa8.54□□□□□ -1.04
SPTBN1-207ENST00000615901 ZNF322Q6U7Q0 402 aaPredicted RBP8.54□□□□□ -1.04
SPTBN1-207ENST00000615901 MSLNLQ96KJ4 702 aa8.54□□□□□ -1.04
SPTBN1-207ENST00000615901 LYRM1O43325 122 aa8.54□□□□□ -1.04
SPTBN1-207ENST00000615901 ARNTP27540 789 aa8.54□□□□□ -1.04
SPTBN1-207ENST00000615901 SNTB2Q13425 540 aaKnown RBP8.54□□□□□ -1.04
SPTBN1-207ENST00000615901 MRPL58Q14197 206 aaKnown RBP8.54□□□□□ -1.04
SPTBN1-207ENST00000615901 TMPRSS9Q7Z410 1059 aa8.54□□□□□ -1.04
SPTBN1-207ENST00000615901 OR9A4Q8NGU2 314 aa8.54□□□□□ -1.04
SPTBN1-207ENST00000615901 SMIM14Q96QK8 99 aa8.54□□□□□ -1.04
SPTBN1-207ENST00000615901 SAP130Q9H0E3 1048 aa8.54□□□□□ -1.04
SPTBN1-207ENST00000615901 KLHL13Q9P2N7 655 aa8.54□□□□□ -1.04
SPTBN1-207ENST00000615901 POLR2HP52434 150 aaKnown RBP8.53□□□□□ -1.04
SPTBN1-207ENST00000615901 ZNF454Q8N9F8 522 aa8.53□□□□□ -1.04
SPTBN1-207ENST00000615901 OR7G1Q8NGA0 311 aa8.53□□□□□ -1.04
SPTBN1-207ENST00000615901 OR51Q1Q8NH59 317 aa8.53□□□□□ -1.04
SPTBN1-207ENST00000615901 GPR78Q96P69 363 aa8.53□□□□□ -1.04
SPTBN1-207ENST00000615901 SLC22A12Q96S37 553 aa8.53□□□□□ -1.04
SPTBN1-207ENST00000615901 STARD5Q9NSY2 213 aa8.53□□□□□ -1.04
SPTBN1-207ENST00000615901 CACNG2Q9Y698 323 aa8.53□□□□□ -1.04
SPTBN1-207ENST00000615901 ZSCAN5BA6NJL1 495 aa8.53□□□□□ -1.04
SPTBN1-207ENST00000615901 M0R036 132 aa8.53□□□□□ -1.04
SPTBN1-207ENST00000615901 ZFAND5O76080 213 aa8.53□□□□□ -1.04
SPTBN1-207ENST00000615901 IFNGR1P15260 489 aa8.53□□□□□ -1.04
SPTBN1-207ENST00000615901 CAMK2DQ13557 499 aa8.53□□□□□ -1.04
SPTBN1-207ENST00000615901 UGT8Q16880 541 aa8.53□□□□□ -1.04
SPTBN1-207ENST00000615901 PPP1R3BQ86XI6 285 aa8.53□□□□□ -1.04
SPTBN1-207ENST00000615901 NAXEQ8NCW5 288 aa8.53□□□□□ -1.04
SPTBN1-207ENST00000615901 ZMYND19Q96E35 227 aaPredicted RBP8.53□□□□□ -1.04
SPTBN1-207ENST00000615901 R3HDMLQ9H3Y0 253 aa8.53□□□□□ -1.04
SPTBN1-207ENST00000615901 ERVK13-1Q9NX77 482 aa8.53□□□□□ -1.04
SPTBN1-207ENST00000615901 ZNF850A8MQ14 1090 aa8.53□□□□□ -1.04
SPTBN1-207ENST00000615901 ZNF16P17020 682 aaPredicted RBP8.53□□□□□ -1.04
SPTBN1-207ENST00000615901 POU3F2P20265 443 aaPredicted RBP8.53□□□□□ -1.04
SPTBN1-207ENST00000615901 POU3F4P49335 361 aa8.53□□□□□ -1.04
SPTBN1-207ENST00000615901 KIAA1211LQ6NV74 962 aa8.53□□□□□ -1.04
SPTBN1-207ENST00000615901 TMEM151AQ8N4L1 468 aa8.53□□□□□ -1.04
SPTBN1-207ENST00000615901 LSM14AQ8ND56 463 aaKnown RBP8.53□□□□□ -1.04
SPTBN1-207ENST00000615901 TMEM165Q9HC07 324 aa8.53□□□□□ -1.04
SPTBN1-207ENST00000615901 POLE4Q9NR33 117 aa8.53□□□□□ -1.04
SPTBN1-207ENST00000615901 TEX10Q9NXF1 929 aaPredicted RBP8.53□□□□□ -1.04
SPTBN1-207ENST00000615901 KCNN3Q9UGI6 736 aa8.53□□□□□ -1.04
SPTBN1-207ENST00000615901 A0A1W2PPK0 400 aa8.53□□□□□ -1.04
SPTBN1-207ENST00000615901 TANGO2Q6ICL3 276 aa8.53□□□□□ -1.04
SPTBN1-207ENST00000615901 MBOAT2Q6ZWT7 520 aa8.53□□□□□ -1.04
SPTBN1-207ENST00000615901 UBFD1O14562 309 aaKnown RBP8.53□□□□□ -1.04
SPTBN1-207ENST00000615901 SEC14L5O43304 696 aa8.53□□□□□ -1.04
SPTBN1-207ENST00000615901 SLC35E2P0CK97 266 aa8.53□□□□□ -1.04
SPTBN1-207ENST00000615901 CD97P48960 835 aa8.53□□□□□ -1.04
SPTBN1-207ENST00000615901 KCNJ10P78508 379 aa8.53□□□□□ -1.04
SPTBN1-207ENST00000615901 RIN1Q13671 783 aa8.53□□□□□ -1.04
SPTBN1-207ENST00000615901 MRPL2Q5T653 305 aaKnown RBP8.53□□□□□ -1.04
SPTBN1-207ENST00000615901 Q6ZNB5 142 aa8.53□□□□□ -1.04
SPTBN1-207ENST00000615901 LRRC28Q86X40 367 aaPredicted RBP8.53□□□□□ -1.04
SPTBN1-207ENST00000615901 DNAJC22Q8N4W6 341 aa8.53□□□□□ -1.04
SPTBN1-207ENST00000615901 CCDC71LQ8N9Z2 235 aa8.53□□□□□ -1.04
SPTBN1-207ENST00000615901 KCTD12Q96CX2 325 aaKnown RBP8.53□□□□□ -1.04
SPTBN1-207ENST00000615901 NUP50Q9UKX7 468 aa8.53□□□□□ -1.04
SPTBN1-207ENST00000615901 POLHQ9Y253 713 aa8.53□□□□□ -1.04
SPTBN1-207ENST00000615901 TRBV4-1A0A0J9YWV2 114 aa8.53□□□□□ -1.04
SPTBN1-207ENST00000615901 AP1G1O43747 822 aa8.53□□□□□ -1.04
SPTBN1-207ENST00000615901 GPRIN2O60269 458 aa8.53□□□□□ -1.04
SPTBN1-207ENST00000615901 PTGS2P35354 604 aa8.53□□□□□ -1.04
SPTBN1-207ENST00000615901 CNN3Q15417 329 aaKnown RBP8.53□□□□□ -1.04
SPTBN1-207ENST00000615901 BEST3Q8N1M1 668 aa8.53□□□□□ -1.04
SPTBN1-207ENST00000615901 LOC101059915A0A1B0GWI6 518 aaPredicted RBP8.53□□□□□ -1.04
SPTBN1-207ENST00000615901 CIB4A0PJX0 185 aa8.53□□□□□ -1.04
SPTBN1-207ENST00000615901 TAPBPO15533 448 aa8.53□□□□□ -1.04
SPTBN1-207ENST00000615901 CD34P28906 385 aa8.53□□□□□ -1.04
SPTBN1-207ENST00000615901 GABRA5P31644 462 aa8.53□□□□□ -1.04
SPTBN1-207ENST00000615901 CSNK1A1P48729 337 aa8.53□□□□□ -1.04
SPTBN1-207ENST00000615901 GPR18Q14330 331 aa8.53□□□□□ -1.04
SPTBN1-207ENST00000615901 CYP4V2Q6ZWL3 525 aaPredicted RBP8.53□□□□□ -1.04
SPTBN1-207ENST00000615901 LIX1LQ8IVB5 337 aa8.53□□□□□ -1.04
SPTBN1-207ENST00000615901 TM9SF4Q92544 642 aa8.53□□□□□ -1.04
SPTBN1-207ENST00000615901 CEPT1Q9Y6K0 416 aa8.53□□□□□ -1.04
SPTBN1-207ENST00000615901 ZNF264O43296 627 aa8.53□□□□□ -1.04
SPTBN1-207ENST00000615901 FRS3O43559 492 aa8.53□□□□□ -1.04
SPTBN1-207ENST00000615901 PRSS3P35030 304 aa8.53□□□□□ -1.04
SPTBN1-207ENST00000615901 PBX2P40425 430 aa8.53□□□□□ -1.04
SPTBN1-207ENST00000615901 CYCSP99999 105 aaKnown RBP8.53□□□□□ -1.04
SPTBN1-207ENST00000615901 EMX1Q04741 257 aaPredicted RBP8.53□□□□□ -1.04
SPTBN1-207ENST00000615901 WDR88Q6ZMY6 472 aa8.53□□□□□ -1.04
SPTBN1-207ENST00000615901 KIAA1958Q8N8K9 716 aa8.53□□□□□ -1.04
SPTBN1-207ENST00000615901 PRRT1Q99946 306 aa8.53□□□□□ -1.04
SPTBN1-207ENST00000615901 TBX21Q9UL17 535 aa8.53□□□□□ -1.04
SPTBN1-207ENST00000615901 AMY2AP04746 511 aa8.52□□□□□ -1.04
SPTBN1-207ENST00000615901 DNASE1P24855 282 aa8.52□□□□□ -1.04
SPTBN1-207ENST00000615901 OPN5Q6U736 354 aa8.52□□□□□ -1.04
SPTBN1-207ENST00000615901 FAM217AQ8IXS0 508 aa8.52□□□□□ -1.04
SPTBN1-207ENST00000615901 STACQ99469 402 aa8.52□□□□□ -1.04
SPTBN1-207ENST00000615901 TREM1Q9NP99 234 aa8.52□□□□□ -1.04
SPTBN1-207ENST00000615901 BOKQ9UMX3 212 aaPredicted RBP8.52□□□□□ -1.04
SPTBN1-207ENST00000615901 GIMAP1-GIMAP5A0A087WTJ2 511 aa8.52□□□□□ -1.05
SPTBN1-207ENST00000615901 VNN2O95498 520 aa8.52□□□□□ -1.05
SPTBN1-207ENST00000615901 ADH6P28332 368 aa8.52□□□□□ -1.05
SPTBN1-207ENST00000615901 PFN3P60673 137 aa8.52□□□□□ -1.05
SPTBN1-207ENST00000615901 AIMP2Q13155 320 aaKnown RBP8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms