RNA–Protein interactions for RNA: ENST00000613394.4

HPS1-215, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HPS1, Length 3,714 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-215ENST00000613394 KIAA1143Q96AT1 154 aaPredicted RBP12.82□□□□□ -0.36
HPS1-215ENST00000613394 RSPH9Q9H1X1 276 aaPredicted RBP12.82□□□□□ -0.36
HPS1-215ENST00000613394 FGF22Q9HCT0 170 aa12.82□□□□□ -0.36
HPS1-215ENST00000613394 CABIN1Q9Y6J0 2220 aa12.82□□□□□ -0.36
HPS1-215ENST00000613394 PLXND1Q9Y4D7 1925 aa12.82□□□□□ -0.36
HPS1-215ENST00000613394 A8MUA0 341 aa12.82□□□□□ -0.36
HPS1-215ENST00000613394 TBXA2RP21731 343 aa12.82□□□□□ -0.36
HPS1-215ENST00000613394 HOXD11P31277 338 aaPredicted RBP12.82□□□□□ -0.36
HPS1-215ENST00000613394 ERVK-21P61565 698 aa12.82□□□□□ -0.36
HPS1-215ENST00000613394 TRA2BP62995 288 aaKnown RBP12.82□□□□□ -0.36
HPS1-215ENST00000613394 TMEM91Q6ZNR0 172 aa12.82□□□□□ -0.36
HPS1-215ENST00000613394 ANKRD33Q7Z3H0 272 aa12.82□□□□□ -0.36
HPS1-215ENST00000613394 OR52N1Q8NH53 320 aa12.82□□□□□ -0.36
HPS1-215ENST00000613394 CNOT9Q92600 299 aaKnown RBP12.82□□□□□ -0.36
HPS1-215ENST00000613394 METTL17Q9H7H0 456 aaPredicted RBP12.82□□□□□ -0.36
HPS1-215ENST00000613394 PPP1R3EQ9H7J1 279 aa12.82□□□□□ -0.36
HPS1-215ENST00000613394 TCF7L1Q9HCS4 588 aa12.82□□□□□ -0.36
HPS1-215ENST00000613394 ACOXLQ9NUZ1 547 aa12.82□□□□□ -0.36
HPS1-215ENST00000613394 LYARQ9NX58 379 aaKnown RBP12.82□□□□□ -0.36
HPS1-215ENST00000613394 DOCK9Q9BZ29 2069 aa12.81□□□□□ -0.36
HPS1-215ENST00000613394 IGKV1-8A0A0C4DH67 115 aa12.81□□□□□ -0.36
HPS1-215ENST00000613394 GXYLT2A0PJZ3 443 aa12.81□□□□□ -0.36
HPS1-215ENST00000613394 OR2W5A6NFC9 320 aa12.81□□□□□ -0.36
HPS1-215ENST00000613394 POM121CA8CG34 1229 aa12.81□□□□□ -0.36
HPS1-215ENST00000613394 KDM4EB2RXH2 506 aaPredicted RBP12.81□□□□□ -0.36
HPS1-215ENST00000613394 SYT5O00445 386 aa12.81□□□□□ -0.36
HPS1-215ENST00000613394 CPMP14384 443 aa12.81□□□□□ -0.36
HPS1-215ENST00000613394 FGF9P31371 208 aaPredicted RBP12.81□□□□□ -0.36
HPS1-215ENST00000613394 ZMYND11Q15326 602 aa12.81□□□□□ -0.36
HPS1-215ENST00000613394 TANGO2Q6ICL3 276 aa12.81□□□□□ -0.36
HPS1-215ENST00000613394 NIPAL3Q6P499 406 aa12.81□□□□□ -0.36
HPS1-215ENST00000613394 ADAMTSL4Q6UY14 1074 aa12.81□□□□□ -0.36
HPS1-215ENST00000613394 FAM220AQ7Z4H9 259 aa12.81□□□□□ -0.36
HPS1-215ENST00000613394 GPALPP1Q8IXQ4 340 aa12.81□□□□□ -0.36
HPS1-215ENST00000613394 PRSS58Q8IYP2 241 aa12.81□□□□□ -0.36
HPS1-215ENST00000613394 FRMD1Q8N878 549 aa12.81□□□□□ -0.36
HPS1-215ENST00000613394 SFXN5Q8TD22 340 aa12.81□□□□□ -0.36
HPS1-215ENST00000613394 SDF2Q99470 211 aa12.81□□□□□ -0.36
HPS1-215ENST00000613394 NIPAL2Q9H841 368 aa12.81□□□□□ -0.36
HPS1-215ENST00000613394 NDOR1Q9UHB4 597 aa12.81□□□□□ -0.36
HPS1-215ENST00000613394 POLHQ9Y253 713 aa12.81□□□□□ -0.36
HPS1-215ENST00000613394 MEIS3P1A6NDR6 274 aa12.81□□□□□ -0.36
HPS1-215ENST00000613394 M0R233 179 aa12.81□□□□□ -0.36
HPS1-215ENST00000613394 LCN1P31025 176 aa12.81□□□□□ -0.36
HPS1-215ENST00000613394 SLC6A6P31641 620 aa12.81□□□□□ -0.36
HPS1-215ENST00000613394 PITPNAQ00169 270 aa12.81□□□□□ -0.36
HPS1-215ENST00000613394 ERV3-1Q14264 604 aa12.81□□□□□ -0.36
HPS1-215ENST00000613394 METAP1DQ6UB28 335 aaPredicted RBP12.81□□□□□ -0.36
HPS1-215ENST00000613394 OR2L8Q8NGY9 312 aa12.81□□□□□ -0.36
HPS1-215ENST00000613394 LGALS14Q8TCE9 139 aa12.81□□□□□ -0.36
HPS1-215ENST00000613394 SPPL3Q8TCT6 385 aa12.81□□□□□ -0.36
HPS1-215ENST00000613394 PATE1Q8WXA2 126 aa12.81□□□□□ -0.36
HPS1-215ENST00000613394 CREB3L1Q96BA8 519 aa12.81□□□□□ -0.36
HPS1-215ENST00000613394 TRIM43Q96BQ3 446 aaPredicted RBP12.81□□□□□ -0.36
HPS1-215ENST00000613394 OR2M4Q96R27 311 aa12.81□□□□□ -0.36
HPS1-215ENST00000613394 MED18Q9BUE0 208 aa12.81□□□□□ -0.36
HPS1-215ENST00000613394 IL20Q9NYY1 176 aa12.81□□□□□ -0.36
HPS1-215ENST00000613394 SGK494L7N484 410 aa12.8□□□□□ -0.36
HPS1-215ENST00000613394 DNAJB6O75190 326 aa12.8□□□□□ -0.36
HPS1-215ENST00000613394 TIMP1P01033 207 aa12.8□□□□□ -0.36
HPS1-215ENST00000613394 GJA4P35212 333 aa12.8□□□□□ -0.36
HPS1-215ENST00000613394 P2RX3P56373 397 aa12.8□□□□□ -0.36
HPS1-215ENST00000613394 C1orf61Q13536 156 aa12.8□□□□□ -0.36
HPS1-215ENST00000613394 RUNX3Q13761 415 aa12.8□□□□□ -0.36
HPS1-215ENST00000613394 DUSP6Q16828 381 aa12.8□□□□□ -0.36
HPS1-215ENST00000613394 ZNF613Q6PF04 617 aa12.8□□□□□ -0.36
HPS1-215ENST00000613394 OR4D9Q8NGE8 314 aa12.8□□□□□ -0.36
HPS1-215ENST00000613394 DNAJA4Q8WW22 397 aaPredicted RBP12.8□□□□□ -0.36
HPS1-215ENST00000613394 NARS2Q96I59 477 aaKnown RBP12.8□□□□□ -0.36
HPS1-215ENST00000613394 FOXN4Q96NZ1 517 aa12.8□□□□□ -0.36
HPS1-215ENST00000613394 AUNIPQ9H7T9 357 aa12.8□□□□□ -0.36
HPS1-215ENST00000613394 ASB6Q9NWX5 421 aa12.8□□□□□ -0.36
HPS1-215ENST00000613394 MGAT4CQ9UBM8 478 aa12.8□□□□□ -0.36
HPS1-215ENST00000613394 TBC1D29Q9UFV1 150 aa12.8□□□□□ -0.36
HPS1-215ENST00000613394 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.8□□□□□ -0.36
HPS1-215ENST00000613394 SF3B6Q9Y3B4 125 aaKnown RBP12.8□□□□□ -0.36
HPS1-215ENST00000613394 ADAM18Q9Y3Q7 739 aa12.8□□□□□ -0.36
HPS1-215ENST00000613394 FXYD6-FXYD2A0A087WZ82 144 aa12.8□□□□□ -0.36
HPS1-215ENST00000613394 CIB4A0PJX0 185 aa12.8□□□□□ -0.36
HPS1-215ENST00000613394 POM121BA6NF01 834 aa12.8□□□□□ -0.36
HPS1-215ENST00000613394 ARPC1BO15143 372 aaKnown RBP12.8□□□□□ -0.36
HPS1-215ENST00000613394 NUPL2O15504 423 aaKnown RBP12.8□□□□□ -0.36
HPS1-215ENST00000613394 AGR2O95994 175 aa12.8□□□□□ -0.36
HPS1-215ENST00000613394 GNRH1P01148 92 aa12.8□□□□□ -0.36
HPS1-215ENST00000613394 DBIP07108 87 aaKnown RBP12.8□□□□□ -0.36
HPS1-215ENST00000613394 ITPKBP27987 946 aa12.8□□□□□ -0.36
HPS1-215ENST00000613394 PRKAR1BP31321 381 aa12.8□□□□□ -0.36
HPS1-215ENST00000613394 TMEM52BQ4KMG9 183 aa12.8□□□□□ -0.36
HPS1-215ENST00000613394 FIGLAQ6QHK4 219 aa12.8□□□□□ -0.36
HPS1-215ENST00000613394 ZNF527Q8NB42 609 aa12.8□□□□□ -0.36
HPS1-215ENST00000613394 BADQ92934 168 aa12.8□□□□□ -0.36
HPS1-215ENST00000613394 FXYD6Q9H0Q3 95 aa12.8□□□□□ -0.36
HPS1-215ENST00000613394 RANBP3Q9H6Z4 567 aaPredicted RBP12.8□□□□□ -0.36
HPS1-215ENST00000613394 MKKSQ9NPJ1 570 aaPredicted RBP12.8□□□□□ -0.36
HPS1-215ENST00000613394 HRASLS2Q9NWW9 162 aa12.8□□□□□ -0.36
HPS1-215ENST00000613394 TAS2R10Q9NYW0 307 aa12.8□□□□□ -0.36
HPS1-215ENST00000613394 ACAD8Q9UKU7 415 aa12.8□□□□□ -0.36
HPS1-215ENST00000613394 CSN2P05814 226 aa12.8□□□□□ -0.36
HPS1-215ENST00000613394 SBK2P0C263 348 aa12.8□□□□□ -0.36
HPS1-215ENST00000613394 CFL1P23528 166 aaKnown RBP12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms